RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 L3MBTL2Q969R5 705 aa11.75□□□□□ -0.53
XRN1-212ENST00000486211 USP42Q9H9J4 1324 aaKnown RBP11.75□□□□□ -0.53
XRN1-212ENST00000486211 ADAMTS7Q9UKP4 1686 aa11.75□□□□□ -0.53
XRN1-212ENST00000486211 TM4SF1P30408 202 aa11.74□□□□□ -0.53
XRN1-212ENST00000486211 DPY19L2Q6NUT2 758 aa11.74□□□□□ -0.53
XRN1-212ENST00000486211 TNRC18O15417 2968 aaPredicted RBP11.74□□□□□ -0.53
XRN1-212ENST00000486211 RASSF10A6NK89 507 aa11.73□□□□□ -0.53
XRN1-212ENST00000486211 TMEM88BA6NKF7 163 aa11.73□□□□□ -0.53
XRN1-212ENST00000486211 ITGBL1O95965 494 aaPredicted RBP11.73□□□□□ -0.53
XRN1-212ENST00000486211 THSD7BQ9C0I4 1608 aa11.73□□□□□ -0.53
XRN1-212ENST00000486211 DICER1Q9UPY3 1922 aaKnown RBP11.73□□□□□ -0.53
XRN1-212ENST00000486211 NRXN2Q9P2S2 1712 aa11.72□□□□□ -0.53
XRN1-212ENST00000486211 FLT4P35916 1363 aa11.72□□□□□ -0.53
XRN1-212ENST00000486211 G3V3G9 751 aa11.72□□□□□ -0.53
XRN1-212ENST00000486211 SPG7Q9UQ90 795 aa11.72□□□□□ -0.53
XRN1-212ENST00000486211 PHKG2P15735 406 aa11.71□□□□□ -0.53
XRN1-212ENST00000486211 MAP2K1Q02750 393 aaPredicted RBP11.71□□□□□ -0.53
XRN1-212ENST00000486211 LDHDQ86WU2 507 aa11.71□□□□□ -0.53
XRN1-212ENST00000486211 TTLL6Q8N841 843 aa11.71□□□□□ -0.53
XRN1-212ENST00000486211 PUS7Q96PZ0 661 aaKnown RBP11.71□□□□□ -0.53
XRN1-212ENST00000486211 AFDNP55196 1824 aaKnown RBP11.71□□□□□ -0.54
XRN1-212ENST00000486211 PDE4DIPQ5VU43 2346 aa11.7□□□□□ -0.54
XRN1-212ENST00000486211 KIF24Q5T7B8 1368 aa11.7□□□□□ -0.54
XRN1-212ENST00000486211 TONSLQ96HA7 1378 aa11.7□□□□□ -0.54
XRN1-212ENST00000486211 DDNO94850 711 aaPredicted RBP11.7□□□□□ -0.54
XRN1-212ENST00000486211 MARVELD3Q96A59 401 aa11.7□□□□□ -0.54
XRN1-212ENST00000486211 ADAMTSL1Q8N6G6 1762 aa11.69□□□□□ -0.54
XRN1-212ENST00000486211 WDR33Q9C0J8 1336 aaKnown RBP11.69□□□□□ -0.54
XRN1-212ENST00000486211 FYB1O15117 783 aa11.69□□□□□ -0.54
XRN1-212ENST00000486211 DEFB115Q30KQ5 88 aa11.69□□□□□ -0.54
XRN1-212ENST00000486211 ERFEQ4G0M1 354 aa11.69□□□□□ -0.54
XRN1-212ENST00000486211 IFNL2Q8IZJ0 200 aa11.69□□□□□ -0.54
XRN1-212ENST00000486211 FER1L6Q2WGJ9 1857 aa11.69□□□□□ -0.54
XRN1-212ENST00000486211 CRKLP46109 303 aaKnown RBP11.68□□□□□ -0.54
XRN1-212ENST00000486211 GGNBP2Q9H3C7 697 aa11.68□□□□□ -0.54
XRN1-212ENST00000486211 TAF1DQ9H5J8 278 aaPredicted RBP11.68□□□□□ -0.54
XRN1-212ENST00000486211 BOLA1Q9Y3E2 137 aa11.68□□□□□ -0.54
XRN1-212ENST00000486211 TJP1Q07157 1748 aa11.68□□□□□ -0.54
XRN1-212ENST00000486211 CARMIL3Q8ND23 1372 aa11.67□□□□□ -0.54
XRN1-212ENST00000486211 SCN4AP35499 1836 aa11.67□□□□□ -0.54
XRN1-212ENST00000486211 LTBP1Q14766 1721 aa11.67□□□□□ -0.54
XRN1-212ENST00000486211 MCOLN1Q9GZU1 580 aa11.67□□□□□ -0.54
XRN1-212ENST00000486211 LTBP3Q9NS15 1303 aa11.66□□□□□ -0.54
XRN1-212ENST00000486211 NFIXQ14938 502 aa11.66□□□□□ -0.54
XRN1-212ENST00000486211 C2CD5Q86YS7 1000 aa11.66□□□□□ -0.54
XRN1-212ENST00000486211 IQCA1LA6NCM1 817 aa11.65□□□□□ -0.54
XRN1-212ENST00000486211 ERVV-2B6SEH9 535 aa11.65□□□□□ -0.54
XRN1-212ENST00000486211 USPL1Q5W0Q7 1092 aa11.65□□□□□ -0.54
XRN1-212ENST00000486211 INTS5Q6P9B9 1019 aaKnown RBP11.65□□□□□ -0.54
XRN1-212ENST00000486211 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
XRN1-212ENST00000486211 ANKRD26Q9UPS8 1709 aa11.64□□□□□ -0.55
XRN1-212ENST00000486211 EYA1Q99502 592 aa11.64□□□□□ -0.55
XRN1-212ENST00000486211 TSKSQ9UJT2 592 aa11.64□□□□□ -0.55
XRN1-212ENST00000486211 EMILIN1Q9Y6C2 1016 aa11.64□□□□□ -0.55
XRN1-212ENST00000486211 COL11A2P13942 1736 aaPredicted RBP11.63□□□□□ -0.55
XRN1-212ENST00000486211 H0YIN7 160 aa11.63□□□□□ -0.55
XRN1-212ENST00000486211 C21orf2O43822 256 aa11.63□□□□□ -0.55
XRN1-212ENST00000486211 SERPINB2P05120 415 aa11.63□□□□□ -0.55
XRN1-212ENST00000486211 EFCAB3Q8N7B9 438 aa11.63□□□□□ -0.55
XRN1-212ENST00000486211 BCL2L12Q9HB09 334 aa11.63□□□□□ -0.55
XRN1-212ENST00000486211 ANKRD31Q8N7Z5 1873 aa11.63□□□□□ -0.55
XRN1-212ENST00000486211 SOS1Q07889 1333 aaPredicted RBP11.62□□□□□ -0.55
XRN1-212ENST00000486211 PTCD1O75127 700 aaKnown RBP11.62□□□□□ -0.55
XRN1-212ENST00000486211 ZPR1O75312 459 aa11.62□□□□□ -0.55
XRN1-212ENST00000486211 EMP3P54852 163 aa11.62□□□□□ -0.55
XRN1-212ENST00000486211 PRPF38BQ5VTL8 546 aaKnown RBP11.62□□□□□ -0.55
XRN1-212ENST00000486211 CAPNS2Q96L46 248 aa11.62□□□□□ -0.55
XRN1-212ENST00000486211 TAOK3Q9H2K8 898 aa11.62□□□□□ -0.55
XRN1-212ENST00000486211 ABT1Q9ULW3 272 aaKnown RBP11.62□□□□□ -0.55
XRN1-212ENST00000486211 KIF20BQ96Q89 1820 aa11.61□□□□□ -0.55
XRN1-212ENST00000486211 EAPPQ56P03 285 aaPredicted RBP11.61□□□□□ -0.55
XRN1-212ENST00000486211 MAP1SQ66K74 1059 aaPredicted RBP11.61□□□□□ -0.55
XRN1-212ENST00000486211 CNTROBQ8N137 903 aa11.61□□□□□ -0.55
XRN1-212ENST00000486211 TESK2Q96S53 571 aa11.61□□□□□ -0.55
XRN1-212ENST00000486211 BEGAINQ9BUH8 593 aa11.61□□□□□ -0.55
XRN1-212ENST00000486211 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
XRN1-212ENST00000486211 GPR101Q96P66 508 aaPredicted RBP11.6□□□□□ -0.55
XRN1-212ENST00000486211 NARFQ9UHQ1 456 aa11.6□□□□□ -0.55
XRN1-212ENST00000486211 WASHC2AQ641Q2 1341 aa11.6□□□□□ -0.55
XRN1-212ENST00000486211 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
XRN1-212ENST00000486211 RIOK3O14730 519 aaKnown RBP11.59□□□□□ -0.55
XRN1-212ENST00000486211 EPHX2P34913 555 aa11.59□□□□□ -0.55
XRN1-212ENST00000486211 CABP4P57796 275 aa11.59□□□□□ -0.55
XRN1-212ENST00000486211 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
XRN1-212ENST00000486211 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.552e-7■■□□□ 14.3
XRN1-212ENST00000486211 DDX21Q9NR30 783 aaKnown RBP eCLIP11.59□□□□□ -0.55
XRN1-212ENST00000486211 HACL1Q9UJ83 578 aa11.59□□□□□ -0.55
XRN1-212ENST00000486211 CASP8AP2Q9UKL3 1982 aa11.59□□□□□ -0.55
XRN1-212ENST00000486211 SLX4Q8IY92 1834 aa11.58□□□□□ -0.56
XRN1-212ENST00000486211 COL15A1P39059 1388 aa11.58□□□□□ -0.56
XRN1-212ENST00000486211 HSP90AB1P08238 724 aaKnown RBP11.58□□□□□ -0.56
XRN1-212ENST00000486211 ECE1P42892 770 aa11.58□□□□□ -0.56
XRN1-212ENST00000486211 FMR1Q06787 632 aaKnown RBP eCLIP11.58□□□□□ -0.56
XRN1-212ENST00000486211 DGKZQ13574 1117 aa11.58□□□□□ -0.56
XRN1-212ENST00000486211 SIN3AQ96ST3 1273 aa11.58□□□□□ -0.56
XRN1-212ENST00000486211 AOC2O75106 756 aa11.57□□□□□ -0.56
XRN1-212ENST00000486211 PNMA8AQ86V59 439 aaPredicted RBP11.57□□□□□ -0.56
XRN1-212ENST00000486211 DNAJC10Q8IXB1 793 aa11.57□□□□□ -0.56
XRN1-212ENST00000486211 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
XRN1-212ENST00000486211 CA12O43570 354 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms