RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 HLFQ16534 295 aa25.56■■□□□ 1.68
SNX5-213ENST00000486039 KRT24Q2M2I5 525 aa25.56■■□□□ 1.68
SNX5-213ENST00000486039 CCDC24Q8N4L8 307 aa25.56■■□□□ 1.68
SNX5-213ENST00000486039 ZNF652Q9Y2D9 606 aa25.56■■□□□ 1.68
SNX5-213ENST00000486039 RGL2O15211 777 aa25.55■■□□□ 1.68
SNX5-213ENST00000486039 EIF2S2P20042 333 aaKnown RBP25.55■■□□□ 1.68
SNX5-213ENST00000486039 ERBB4Q15303 1308 aa25.55■■□□□ 1.68
SNX5-213ENST00000486039 PDIA6Q15084 440 aa25.54■■□□□ 1.68
SNX5-213ENST00000486039 C9orf131Q5VYM1 1079 aa25.54■■□□□ 1.68
SNX5-213ENST00000486039 TTLL7Q6ZT98 887 aa25.54■■□□□ 1.68
SNX5-213ENST00000486039 CFAP44Q96MT7 982 aa25.54■■□□□ 1.68
SNX5-213ENST00000486039 MRS2Q9HD23 443 aa25.54■■□□□ 1.68
SNX5-213ENST00000486039 LRP10Q7Z4F1 713 aa25.53■■□□□ 1.68
SNX5-213ENST00000486039 ZNF853P0CG23 659 aa25.52■■□□□ 1.68
SNX5-213ENST00000486039 C2CD5Q86YS7 1000 aa25.52■■□□□ 1.68
SNX5-213ENST00000486039 CNBD1Q8NA66 436 aa25.52■■□□□ 1.68
SNX5-213ENST00000486039 BRIP1Q9BX63 1249 aa25.52■■□□□ 1.68
SNX5-213ENST00000486039 NIP7Q9Y221 180 aaKnown RBP eCLIP25.52■■□□□ 1.68
SNX5-213ENST00000486039 ERVV-1B6SEH8 477 aa25.51■■□□□ 1.67
SNX5-213ENST00000486039 PROSER3Q2NL68 480 aa25.51■■□□□ 1.67
SNX5-213ENST00000486039 MAP3K15Q6ZN16 1313 aa25.51■■□□□ 1.67
SNX5-213ENST00000486039 H0YIN7 160 aa25.5■■□□□ 1.67
SNX5-213ENST00000486039 ANXA1P04083 346 aa25.5■■□□□ 1.67
SNX5-213ENST00000486039 NECTIN2Q92692 538 aa25.5■■□□□ 1.67
SNX5-213ENST00000486039 MBIPQ9NS73 344 aa25.5■■□□□ 1.67
SNX5-213ENST00000486039 ANKRD31Q8N7Z5 1873 aa25.49■■□□□ 1.67
SNX5-213ENST00000486039 HSPA6P17066 643 aa25.49■■□□□ 1.67
SNX5-213ENST00000486039 KIF6Q6ZMV9 814 aa25.49■■□□□ 1.67
SNX5-213ENST00000486039 NBPF5PQ86XG9 351 aaPredicted RBP25.49■■□□□ 1.67
SNX5-213ENST00000486039 NPHP1O15259 732 aa25.48■■□□□ 1.67
SNX5-213ENST00000486039 PDE6BP35913 854 aa25.48■■□□□ 1.67
SNX5-213ENST00000486039 ST5P78524 1137 aa25.48■■□□□ 1.67
SNX5-213ENST00000486039 ZBTB3Q9H5J0 574 aa25.48■■□□□ 1.67
SNX5-213ENST00000486039 IFT57Q9NWB7 429 aa25.47■■□□□ 1.67
SNX5-213ENST00000486039 RNF181Q9P0P0 153 aa25.47■■□□□ 1.67
SNX5-213ENST00000486039 DLEC1Q9Y238 1755 aa25.46■■□□□ 1.67
SNX5-213ENST00000486039 TTLL6Q8N841 843 aa25.46■■□□□ 1.67
SNX5-213ENST00000486039 NMRK2Q9NPI5 230 aa25.46■■□□□ 1.67
SNX5-213ENST00000486039 PDZRN3Q9UPQ7 1066 aa25.46■■□□□ 1.67
SNX5-213ENST00000486039 FAM177BA6PVY3 158 aa25.45■■□□□ 1.66
SNX5-213ENST00000486039 GNAI1P63096 354 aa25.45■■□□□ 1.66
SNX5-213ENST00000486039 CALD1Q05682 793 aaKnown RBP25.45■■□□□ 1.66
SNX5-213ENST00000486039 TPTE2Q6XPS3 522 aa25.45■■□□□ 1.66
SNX5-213ENST00000486039 HOXB7P09629 217 aa25.44■■□□□ 1.66
SNX5-213ENST00000486039 ZNF622Q969S3 477 aaKnown RBP eCLIP25.44■■□□□ 1.66
SNX5-213ENST00000486039 TOMM70O94826 608 aa25.43■■□□□ 1.66
SNX5-213ENST00000486039 DUSP27Q5VZP5 1158 aa25.43■■□□□ 1.66
SNX5-213ENST00000486039 GIGYF2Q6Y7W6 1299 aaKnown RBP25.43■■□□□ 1.66
SNX5-213ENST00000486039 DDX21Q9NR30 783 aaKnown RBP eCLIP25.43■■□□□ 1.66
SNX5-213ENST00000486039 NUP98P52948 1817 aa25.42■■□□□ 1.66
SNX5-213ENST00000486039 CEP350Q5VT06 3117 aa25.42■■□□□ 1.66
SNX5-213ENST00000486039 CCDC27Q2M243 656 aa25.42■■□□□ 1.66
SNX5-213ENST00000486039 HDGFL1Q5TGJ6 251 aa25.42■■□□□ 1.66
SNX5-213ENST00000486039 COPS6Q7L5N1 327 aa25.42■■□□□ 1.66
SNX5-213ENST00000486039 ZNF34Q8IZ26 560 aa25.42■■□□□ 1.66
SNX5-213ENST00000486039 CHPF2Q9P2E5 772 aa25.42■■□□□ 1.66
SNX5-213ENST00000486039 COL11A2P13942 1736 aaPredicted RBP25.42■■□□□ 1.66
SNX5-213ENST00000486039 UBN2Q6ZU65 1347 aa25.41■■□□□ 1.66
SNX5-213ENST00000486039 SBF1O95248 1867 aa25.41■■□□□ 1.66
SNX5-213ENST00000486039 SRGNP10124 158 aa25.41■■□□□ 1.66
SNX5-213ENST00000486039 GPTP24298 496 aa25.41■■□□□ 1.66
SNX5-213ENST00000486039 RASSF7Q02833 373 aa25.41■■□□□ 1.66
SNX5-213ENST00000486039 XAGE3Q8WTP9 111 aa25.41■■□□□ 1.66
SNX5-213ENST00000486039 KLRG2A4D1S0 409 aaPredicted RBP25.4■■□□□ 1.66
SNX5-213ENST00000486039 AIMP1Q12904 312 aaKnown RBP25.4■■□□□ 1.66
SNX5-213ENST00000486039 WWC1Q8IX03 1113 aa25.4■■□□□ 1.66
SNX5-213ENST00000486039 KDM2BQ8NHM5 1336 aa25.39■■□□□ 1.66
SNX5-213ENST00000486039 SUSD4Q5VX71 490 aa25.39■■□□□ 1.66
SNX5-213ENST00000486039 MASTLQ96GX5 879 aa25.39■■□□□ 1.66
SNX5-213ENST00000486039 LMNB1P20700 586 aa25.38■■□□□ 1.65
SNX5-213ENST00000486039 NCBP3Q53F19 620 aaKnown RBP25.38■■□□□ 1.65
SNX5-213ENST00000486039 STYK1Q6J9G0 422 aa25.38■■□□□ 1.65
SNX5-213ENST00000486039 NUTM1Q86Y26 1132 aa25.38■■□□□ 1.65
SNX5-213ENST00000486039 NYXQ9GZU5 481 aa25.38■■□□□ 1.65
SNX5-213ENST00000486039 ELL2O00472 640 aaPredicted RBP25.37■■□□□ 1.65
SNX5-213ENST00000486039 GTF2E1P29083 439 aaPredicted RBP25.37■■□□□ 1.65
SNX5-213ENST00000486039 C8orf58Q8NAV2 365 aa25.37■■□□□ 1.65
SNX5-213ENST00000486039 DBF4Q9UBU7 674 aaPredicted RBP25.37■■□□□ 1.65
SNX5-213ENST00000486039 ABCC12Q96J65 1359 aa25.36■■□□□ 1.65
SNX5-213ENST00000486039 PRELPP51888 382 aa25.36■■□□□ 1.65
SNX5-213ENST00000486039 ERFEQ4G0M1 354 aa25.36■■□□□ 1.65
SNX5-213ENST00000486039 CNKSR1Q969H4 720 aa25.36■■□□□ 1.65
SNX5-213ENST00000486039 ZC3H4Q9UPT8 1303 aaKnown RBP25.36■■□□□ 1.65
SNX5-213ENST00000486039 IBTKQ9P2D0 1353 aaPredicted RBP25.35■■□□□ 1.65
SNX5-213ENST00000486039 C16orf71Q8IYS4 520 aaPredicted RBP25.35■■□□□ 1.65
SNX5-213ENST00000486039 FAM9BQ8IZU0 186 aa25.35■■□□□ 1.65
SNX5-213ENST00000486039 RBM46Q8TBY0 533 aaKnown RBP25.35■■□□□ 1.65
SNX5-213ENST00000486039 ZNF219Q9P2Y4 722 aaPredicted RBP25.35■■□□□ 1.65
SNX5-213ENST00000486039 C21orf2O43822 256 aa25.34■■□□□ 1.65
SNX5-213ENST00000486039 NTSR2O95665 410 aa25.34■■□□□ 1.65
SNX5-213ENST00000486039 NPR1P16066 1061 aa25.34■■□□□ 1.65
SNX5-213ENST00000486039 TSR2Q969E8 191 aaKnown RBP25.34■■□□□ 1.65
SNX5-213ENST00000486039 RRAGCQ9HB90 399 aa25.34■■□□□ 1.65
SNX5-213ENST00000486039 NFKBIEO00221 500 aa25.33■■□□□ 1.65
SNX5-213ENST00000486039 APLP1P51693 650 aa25.33■■□□□ 1.65
SNX5-213ENST00000486039 PARP10Q53GL7 1025 aa25.33■■□□□ 1.65
SNX5-213ENST00000486039 PRPF40BQ6NWY9 871 aaKnown RBP25.33■■□□□ 1.65
SNX5-213ENST00000486039 PPP1R42Q7Z4L9 355 aa25.32■■□□□ 1.64
SNX5-213ENST00000486039 TSPYL6Q8N831 410 aa25.32■■□□□ 1.64
SNX5-213ENST00000486039 HYPKQ9NX55 129 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms