RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 LARGE1O95461 756 aa27.02■■□□□ 1.92
CLN5-202ENST00000485938 CPA1P15085 419 aa27.02■■□□□ 1.92
CLN5-202ENST00000485938 ABTB2Q8N961 1025 aa27.02■■□□□ 1.92
CLN5-202ENST00000485938 ATP6V1DQ9Y5K8 247 aa27.02■■□□□ 1.92
CLN5-202ENST00000485938 KDM3BQ7LBC6 1761 aa27.02■■□□□ 1.92
CLN5-202ENST00000485938 ZMYND15Q9H091 742 aa27.01■■□□□ 1.91
CLN5-202ENST00000485938 DIAPH3Q9NSV4 1193 aa27.01■■□□□ 1.91
CLN5-202ENST00000485938 ADCY9O60503 1353 aa27.01■■□□□ 1.91
CLN5-202ENST00000485938 HCLS1P14317 486 aaPredicted RBP27■■□□□ 1.91
CLN5-202ENST00000485938 MTX1Q13505 466 aa27■■□□□ 1.91
CLN5-202ENST00000485938 LGR6Q9HBX8 967 aa27■■□□□ 1.91
CLN5-202ENST00000485938 PTH1RQ03431 593 aa27■■□□□ 1.91
CLN5-202ENST00000485938 RUFY2Q8WXA3 655 aa27■■□□□ 1.91
CLN5-202ENST00000485938 FIBPO43427 364 aa26.99■■□□□ 1.91
CLN5-202ENST00000485938 ADCY5O95622 1261 aa26.99■■□□□ 1.91
CLN5-202ENST00000485938 VPS53Q5VIR6 699 aa26.99■■□□□ 1.91
CLN5-202ENST00000485938 CHMP4AQ9BY43 222 aa26.99■■□□□ 1.91
CLN5-202ENST00000485938 OS9Q13438 667 aaPredicted RBP26.99■■□□□ 1.91
CLN5-202ENST00000485938 KCNB2Q92953 911 aa26.99■■□□□ 1.91
CLN5-202ENST00000485938 KLHL34Q8N239 644 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 MTMR6Q9Y217 621 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 KCNQ3O43525 872 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 GJB2P29033 226 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 ADCK5Q3MIX3 580 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 CCDC83Q8IWF9 413 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 FUCA2Q9BTY2 467 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 TM6SF1Q9BZW5 370 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 PDRG1Q9NUG6 133 aa26.98■■□□□ 1.91
CLN5-202ENST00000485938 CLASRPQ8N2M8 674 aaKnown RBP26.97■■□□□ 1.91
CLN5-202ENST00000485938 JAKMIP1Q96N16 626 aaKnown RBP26.97■■□□□ 1.91
CLN5-202ENST00000485938 ZSWIM6Q9HCJ5 1215 aa26.97■■□□□ 1.91
CLN5-202ENST00000485938 ANXA1P04083 346 aa26.96■■□□□ 1.91
CLN5-202ENST00000485938 TPRNQ4KMQ1 711 aa26.96■■□□□ 1.91
CLN5-202ENST00000485938 MPNDQ8N594 471 aa26.96■■□□□ 1.91
CLN5-202ENST00000485938 PIBF1Q8WXW3 757 aa26.96■■□□□ 1.91
CLN5-202ENST00000485938 ZSCAN31Q96LW9 406 aaPredicted RBP26.96■■□□□ 1.91
CLN5-202ENST00000485938 ECHDC1Q9NTX5 307 aa26.96■■□□□ 1.91
CLN5-202ENST00000485938 LTN1O94822 1766 aa26.96■■□□□ 1.91
CLN5-202ENST00000485938 PRPF40BQ6NWY9 871 aaKnown RBP26.96■■□□□ 1.91
CLN5-202ENST00000485938 ZNF830Q96NB3 372 aaPredicted RBP26.96■■□□□ 1.91
CLN5-202ENST00000485938 SH2B1Q9NRF2 756 aaPredicted RBP26.96■■□□□ 1.91
CLN5-202ENST00000485938 DNM1Q05193 864 aaKnown RBP26.95■■□□□ 1.9
CLN5-202ENST00000485938 CYP46A1Q9Y6A2 500 aa26.95■■□□□ 1.9
CLN5-202ENST00000485938 KDM4AO75164 1064 aa26.94■■□□□ 1.9
CLN5-202ENST00000485938 NBPF6Q5VWK0 638 aa26.94■■□□□ 1.9
CLN5-202ENST00000485938 IP6K1Q92551 441 aa26.94■■□□□ 1.9
CLN5-202ENST00000485938 NBPF4Q96M43 638 aa26.94■■□□□ 1.9
CLN5-202ENST00000485938 ST3GAL1Q11201 340 aa26.94■■□□□ 1.9
CLN5-202ENST00000485938 NECTIN1Q15223 517 aa26.93■■□□□ 1.9
CLN5-202ENST00000485938 GIMAP6Q6P9H5 292 aa26.93■■□□□ 1.9
CLN5-202ENST00000485938 TTC12Q9H892 705 aaPredicted RBP26.93■■□□□ 1.9
CLN5-202ENST00000485938 GPATCH3Q96I76 525 aa26.92■■□□□ 1.9
CLN5-202ENST00000485938 NOLC1Q14978 699 aaKnown RBP eCLIP26.91■■□□□ 1.9
CLN5-202ENST00000485938 MTERF4Q7Z6M4 381 aaKnown RBP26.91■■□□□ 1.9
CLN5-202ENST00000485938 DTNBO60941 627 aa26.91■■□□□ 1.9
CLN5-202ENST00000485938 ERC1Q8IUD2 1116 aa26.91■■□□□ 1.9
CLN5-202ENST00000485938 THEMISQ8N1K5 641 aaPredicted RBP26.91■■□□□ 1.9
CLN5-202ENST00000485938 EVI5LQ96CN4 794 aa26.91■■□□□ 1.9
CLN5-202ENST00000485938 LMO7Q8WWI1 1683 aa26.91■■□□□ 1.9
CLN5-202ENST00000485938 CCDC171Q6TFL3 1326 aa26.91■■□□□ 1.9
CLN5-202ENST00000485938 BTBD11A6QL63 1104 aa26.9■■□□□ 1.9
CLN5-202ENST00000485938 ALDH1L1O75891 902 aa26.9■■□□□ 1.9
CLN5-202ENST00000485938 IFIT2P09913 472 aaKnown RBP26.9■■□□□ 1.9
CLN5-202ENST00000485938 KCNA6P17658 529 aa26.9■■□□□ 1.9
CLN5-202ENST00000485938 ME3Q16798 604 aa26.9■■□□□ 1.9
CLN5-202ENST00000485938 C14orf37Q86TY3 774 aa26.9■■□□□ 1.9
CLN5-202ENST00000485938 MYRIPQ8NFW9 859 aa26.9■■□□□ 1.9
CLN5-202ENST00000485938 DBF4Q9UBU7 674 aaPredicted RBP26.9■■□□□ 1.9
CLN5-202ENST00000485938 TEFQ10587 303 aa26.9■■□□□ 1.9
CLN5-202ENST00000485938 PA2G4Q9UQ80 394 aaKnown RBP26.9■■□□□ 1.9
CLN5-202ENST00000485938 C9orf78Q9NZ63 289 aaPredicted RBP26.89■■□□□ 1.9
CLN5-202ENST00000485938 NFAT5O94916 1531 aa26.89■■□□□ 1.9
CLN5-202ENST00000485938 DNTTIP2Q5QJE6 756 aaKnown RBP26.89■■□□□ 1.89
CLN5-202ENST00000485938 MAP3K2Q9Y2U5 619 aa26.89■■□□□ 1.89
CLN5-202ENST00000485938 CHD2O14647 1828 aaKnown RBP26.88■■□□□ 1.89
CLN5-202ENST00000485938 SPTLC3Q9NUV7 552 aa26.88■■□□□ 1.89
CLN5-202ENST00000485938 ZKSCAN1P17029 563 aaPredicted RBP26.88■■□□□ 1.89
CLN5-202ENST00000485938 AKAP4Q5JQC9 854 aa26.88■■□□□ 1.89
CLN5-202ENST00000485938 RBM8AQ9Y5S9 174 aaKnown RBP26.88■■□□□ 1.89
CLN5-202ENST00000485938 VPS37CA5D8V6 355 aaPredicted RBP26.87■■□□□ 1.89
CLN5-202ENST00000485938 CREB3L3Q68CJ9 461 aa26.87■■□□□ 1.89
CLN5-202ENST00000485938 PRIMPOLQ96LW4 560 aa26.87■■□□□ 1.89
CLN5-202ENST00000485938 ZNF530Q6P9A1 599 aaPredicted RBP26.87■■□□□ 1.89
CLN5-202ENST00000485938 AACSQ86V21 672 aa26.87■■□□□ 1.89
CLN5-202ENST00000485938 NECAB1Q8N987 351 aa26.87■■□□□ 1.89
CLN5-202ENST00000485938 AP5Z1O43299 807 aa26.86■■□□□ 1.89
CLN5-202ENST00000485938 KSR2Q6VAB6 950 aa26.86■■□□□ 1.89
CLN5-202ENST00000485938 C17orf53Q8N3J3 647 aaPredicted RBP26.86■■□□□ 1.89
CLN5-202ENST00000485938 DDX54Q8TDD1 881 aaKnown RBP26.86■■□□□ 1.89
CLN5-202ENST00000485938 TPCN1Q9ULQ1 816 aa26.86■■□□□ 1.89
CLN5-202ENST00000485938 PROSER3Q2NL68 480 aa26.85■■□□□ 1.89
CLN5-202ENST00000485938 MPRIPQ6WCQ1 1025 aa26.85■■□□□ 1.89
CLN5-202ENST00000485938 MAP4K1Q92918 833 aa26.85■■□□□ 1.89
CLN5-202ENST00000485938 ZBTB7CA1YPR0 619 aa26.85■■□□□ 1.89
CLN5-202ENST00000485938 FAM227BQ96M60 508 aa26.85■■□□□ 1.89
CLN5-202ENST00000485938 SETD1BQ9UPS6 1966 aaKnown RBP26.85■■□□□ 1.89
CLN5-202ENST00000485938 PKNOX2Q96KN3 472 aa26.84■■□□□ 1.89
CLN5-202ENST00000485938 SNRKQ9NRH2 765 aa26.84■■□□□ 1.89
CLN5-202ENST00000485938 HDAC5Q9UQL6 1122 aa26.84■■□□□ 1.89
CLN5-202ENST00000485938 RGPD2P0DJD1 1756 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms