RNA–Protein interactions for RNA: ENST00000485589.1

NPDC1-204, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 506 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-204ENST00000485589 LMNB1P20700 586 aa23.37■■□□□ 1.33
NPDC1-204ENST00000485589 PDE6BP35913 854 aa23.37■■□□□ 1.33
NPDC1-204ENST00000485589 NFE2L2Q16236 605 aa23.37■■□□□ 1.33
NPDC1-204ENST00000485589 C21orf2O43822 256 aa23.36■■□□□ 1.33
NPDC1-204ENST00000485589 HLFQ16534 295 aa23.36■■□□□ 1.33
NPDC1-204ENST00000485589 KDM2BQ8NHM5 1336 aa23.35■■□□□ 1.33
NPDC1-204ENST00000485589 LAMB2P55268 1798 aa23.35■■□□□ 1.33
NPDC1-204ENST00000485589 SRGNP10124 158 aa23.35■■□□□ 1.33
NPDC1-204ENST00000485589 EIF4A1P60842 406 aaKnown RBP23.34■■□□□ 1.33
NPDC1-204ENST00000485589 CLEC4GQ6UXB4 293 aa23.34■■□□□ 1.33
NPDC1-204ENST00000485589 RBM46Q8TBY0 533 aaKnown RBP23.34■■□□□ 1.33
NPDC1-204ENST00000485589 ZC3H4Q9UPT8 1303 aaKnown RBP23.33■■□□□ 1.33
NPDC1-204ENST00000485589 HTRA3P83110 453 aa23.32■■□□□ 1.32
NPDC1-204ENST00000485589 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
NPDC1-204ENST00000485589 DNAJC5GQ8N7S2 189 aa23.32■■□□□ 1.32
NPDC1-204ENST00000485589 GLTPD2A6NH11 291 aa23.31■■□□□ 1.32
NPDC1-204ENST00000485589 POTECB2RU33 542 aa23.31■■□□□ 1.32
NPDC1-204ENST00000485589 ST5P78524 1137 aa23.31■■□□□ 1.32
NPDC1-204ENST00000485589 STYK1Q6J9G0 422 aa23.31■■□□□ 1.32
NPDC1-204ENST00000485589 PRPF40BQ6NWY9 871 aaKnown RBP23.31■■□□□ 1.32
NPDC1-204ENST00000485589 NBPF5PQ86XG9 351 aaPredicted RBP23.31■■□□□ 1.32
NPDC1-204ENST00000485589 PDZRN3Q9UPQ7 1066 aa23.31■■□□□ 1.32
NPDC1-204ENST00000485589 NIP7Q9Y221 180 aaKnown RBP eCLIP23.31■■□□□ 1.32
NPDC1-204ENST00000485589 ABCC12Q96J65 1359 aa23.3■■□□□ 1.32
NPDC1-204ENST00000485589 FAM177BA6PVY3 158 aa23.3■■□□□ 1.32
NPDC1-204ENST00000485589 APLP1P51693 650 aa23.3■■□□□ 1.32
NPDC1-204ENST00000485589 TTLL7Q6ZT98 887 aa23.3■■□□□ 1.32
NPDC1-204ENST00000485589 NGEFQ8N5V2 710 aa23.29■■□□□ 1.32
NPDC1-204ENST00000485589 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
NPDC1-204ENST00000485589 MASTLQ96GX5 879 aa23.29■■□□□ 1.32
NPDC1-204ENST00000485589 TAF1P21675 1872 aa23.28■■□□□ 1.32
NPDC1-204ENST00000485589 KLRG2A4D1S0 409 aaPredicted RBP23.28■■□□□ 1.32
NPDC1-204ENST00000485589 NPHP1O15259 732 aa23.28■■□□□ 1.32
NPDC1-204ENST00000485589 OLFM4Q6UX06 510 aa23.28■■□□□ 1.32
NPDC1-204ENST00000485589 ZNF652Q9Y2D9 606 aa23.28■■□□□ 1.32
NPDC1-204ENST00000485589 LTBP3Q9NS15 1303 aa23.28■■□□□ 1.32
NPDC1-204ENST00000485589 SNED1Q8TER0 1413 aa23.27■■□□□ 1.32
NPDC1-204ENST00000485589 RGL2O15211 777 aa23.27■■□□□ 1.32
NPDC1-204ENST00000485589 DDX10Q13206 875 aaKnown RBP23.27■■□□□ 1.32
NPDC1-204ENST00000485589 C16orf71Q8IYS4 520 aaPredicted RBP23.27■■□□□ 1.32
NPDC1-204ENST00000485589 PNISRQ8TF01 805 aaKnown RBP23.27■■□□□ 1.32
NPDC1-204ENST00000485589 CNKSR1Q969H4 720 aa23.27■■□□□ 1.32
NPDC1-204ENST00000485589 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
NPDC1-204ENST00000485589 PCNTO95613 3336 aa23.26■■□□□ 1.31
NPDC1-204ENST00000485589 SCN4AP35499 1836 aa23.26■■□□□ 1.31
NPDC1-204ENST00000485589 NEFMP07197 916 aa23.26■■□□□ 1.31
NPDC1-204ENST00000485589 RRP7AQ9Y3A4 280 aaKnown RBP23.26■■□□□ 1.31
NPDC1-204ENST00000485589 UBN2Q6ZU65 1347 aa23.26■■□□□ 1.31
NPDC1-204ENST00000485589 MYL6BP14649 208 aa23.25■■□□□ 1.31
NPDC1-204ENST00000485589 FSTL1Q12841 308 aa23.25■■□□□ 1.31
NPDC1-204ENST00000485589 RALBP1Q15311 655 aa23.25■■□□□ 1.31
NPDC1-204ENST00000485589 LRP10Q7Z4F1 713 aa23.25■■□□□ 1.31
NPDC1-204ENST00000485589 MAP3K15Q6ZN16 1313 aa23.25■■□□□ 1.31
NPDC1-204ENST00000485589 SLC51AQ86UW1 340 aa23.24■■□□□ 1.31
NPDC1-204ENST00000485589 TAOK3Q9H2K8 898 aa23.24■■□□□ 1.31
NPDC1-204ENST00000485589 COL4A5P29400 1685 aa23.23■■□□□ 1.31
NPDC1-204ENST00000485589 TMPOP42166 694 aaKnown RBP23.23■■□□□ 1.31
NPDC1-204ENST00000485589 RIPK4P57078 832 aa23.23■■□□□ 1.31
NPDC1-204ENST00000485589 ERFEQ4G0M1 354 aa23.23■■□□□ 1.31
NPDC1-204ENST00000485589 TPTE2Q6XPS3 522 aa23.23■■□□□ 1.31
NPDC1-204ENST00000485589 NUTM1Q86Y26 1132 aa23.23■■□□□ 1.31
NPDC1-204ENST00000485589 NPR1P16066 1061 aa23.22■■□□□ 1.31
NPDC1-204ENST00000485589 PDIA6Q15084 440 aa23.22■■□□□ 1.31
NPDC1-204ENST00000485589 ZBTB3Q9H5J0 574 aa23.22■■□□□ 1.31
NPDC1-204ENST00000485589 ERVV-1B6SEH8 477 aa23.21■■□□□ 1.31
NPDC1-204ENST00000485589 VEGFAP15692 232 aaPredicted RBP23.21■■□□□ 1.31
NPDC1-204ENST00000485589 PROSER3Q2NL68 480 aa23.21■■□□□ 1.31
NPDC1-204ENST00000485589 CCDC146Q8IYE0 955 aa23.21■■□□□ 1.31
NPDC1-204ENST00000485589 TSPYL4Q9UJ04 414 aa23.21■■□□□ 1.31
NPDC1-204ENST00000485589 MYBBP1AQ9BQG0 1328 aaKnown RBP23.21■■□□□ 1.31
NPDC1-204ENST00000485589 ADAMTSL1Q8N6G6 1762 aa23.2■■□□□ 1.3
NPDC1-204ENST00000485589 DDX60Q8IY21 1712 aaKnown RBP23.2■■□□□ 1.3
NPDC1-204ENST00000485589 ANXA1P04083 346 aa23.2■■□□□ 1.3
NPDC1-204ENST00000485589 GPTP24298 496 aa23.2■■□□□ 1.3
NPDC1-204ENST00000485589 RIC1Q4ADV7 1423 aa23.19■■□□□ 1.3
NPDC1-204ENST00000485589 DDNO94850 711 aaPredicted RBP23.19■■□□□ 1.3
NPDC1-204ENST00000485589 SMC1BQ8NDV3 1235 aa23.19■■□□□ 1.3
NPDC1-204ENST00000485589 PNNQ9H307 717 aaKnown RBP23.19■■□□□ 1.3
NPDC1-204ENST00000485589 POTEIP0CG38 1075 aa23.18■■□□□ 1.3
NPDC1-204ENST00000485589 POTEJP0CG39 1038 aa23.18■■□□□ 1.3
NPDC1-204ENST00000485589 KRT24Q2M2I5 525 aa23.18■■□□□ 1.3
NPDC1-204ENST00000485589 CRY2Q49AN0 593 aa23.18■■□□□ 1.3
NPDC1-204ENST00000485589 SUSD4Q5VX71 490 aa23.18■■□□□ 1.3
NPDC1-204ENST00000485589 C3orf67Q6ZVT6 689 aa23.18■■□□□ 1.3
NPDC1-204ENST00000485589 ZNF34Q8IZ26 560 aa23.18■■□□□ 1.3
NPDC1-204ENST00000485589 IBTKQ9P2D0 1353 aaPredicted RBP23.17■■□□□ 1.3
NPDC1-204ENST00000485589 LTBP1Q14766 1721 aa23.17■■□□□ 1.3
NPDC1-204ENST00000485589 CCDC93Q567U6 631 aa23.17■■□□□ 1.3
NPDC1-204ENST00000485589 ERBB4Q15303 1308 aa23.16■■□□□ 1.3
NPDC1-204ENST00000485589 NTSR2O95665 410 aa23.16■■□□□ 1.3
NPDC1-204ENST00000485589 SOGA3Q5TF21 947 aa23.16■■□□□ 1.3
NPDC1-204ENST00000485589 KIF6Q6ZMV9 814 aa23.16■■□□□ 1.3
NPDC1-204ENST00000485589 ZNF277Q9NRM2 450 aaPredicted RBP23.16■■□□□ 1.3
NPDC1-204ENST00000485589 TRIM35Q9UPQ4 493 aa23.16■■□□□ 1.3
NPDC1-204ENST00000485589 ZNF541Q9H0D2 1346 aa23.15■■□□□ 1.3
NPDC1-204ENST00000485589 EIF2S2P20042 333 aaKnown RBP23.15■■□□□ 1.3
NPDC1-204ENST00000485589 FKBP4Q02790 459 aaKnown RBP eCLIP23.15■■□□□ 1.37e-7■■■□□ 18.9
NPDC1-204ENST00000485589 GIGYF2Q6Y7W6 1299 aaKnown RBP23.15■■□□□ 1.3
NPDC1-204ENST00000485589 KLRG1Q96E93 195 aa23.15■■□□□ 1.3
NPDC1-204ENST00000485589 NEUROD2Q15784 382 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms