RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 MINDY4BA8MYZ0 360 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 CAVIN4Q5BKX8 364 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 CCAR2Q8N163 923 aaKnown RBP11.78□□□□□ -0.52
STRC-211ENST00000485556 TNMDQ9H2S6 317 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 GRPEL1Q9HAV7 217 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 MAP3K12Q12852 859 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 NBPF6Q5VWK0 638 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 DDX17Q92841 729 aaKnown RBP11.78□□□□□ -0.52
STRC-211ENST00000485556 TNPO1Q92973 898 aaKnown RBP11.78□□□□□ -0.52
STRC-211ENST00000485556 NBPF4Q96M43 638 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 PPP1R1BQ9UD71 204 aaPredicted RBP11.78□□□□□ -0.52
STRC-211ENST00000485556 MYOM2P54296 1465 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 SLC5A1P13866 664 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 MPNDQ8N594 471 aa11.78□□□□□ -0.52
STRC-211ENST00000485556 KDM5AP29375 1690 aaKnown RBP11.78□□□□□ -0.52
STRC-211ENST00000485556 PLXNC1O60486 1568 aa11.77□□□□□ -0.52
STRC-211ENST00000485556 CDKL5O76039 1030 aa11.77□□□□□ -0.52
STRC-211ENST00000485556 HOMER1Q86YM7 354 aa11.77□□□□□ -0.52
STRC-211ENST00000485556 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.52
STRC-211ENST00000485556 SEC24BO95487 1268 aa11.77□□□□□ -0.52
STRC-211ENST00000485556 IPO7O95373 1038 aaKnown RBP11.77□□□□□ -0.53
STRC-211ENST00000485556 CCDC192P0DO97 292 aa11.77□□□□□ -0.53
STRC-211ENST00000485556 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.53
STRC-211ENST00000485556 CFAP45Q9UL16 551 aa11.77□□□□□ -0.53
STRC-211ENST00000485556 UBAP1LF5GYI3 381 aa11.77□□□□□ -0.53
STRC-211ENST00000485556 ANO8Q9HCE9 1232 aaPredicted RBP11.77□□□□□ -0.53
STRC-211ENST00000485556 DDB1Q16531 1140 aa11.76□□□□□ -0.53
STRC-211ENST00000485556 ESYT1Q9BSJ8 1104 aa11.76□□□□□ -0.53
STRC-211ENST00000485556 SF3B2Q13435 895 aaKnown RBP11.76□□□□□ -0.53
STRC-211ENST00000485556 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
STRC-211ENST00000485556 ZNF213O14771 459 aa11.76□□□□□ -0.53
STRC-211ENST00000485556 PIBF1Q8WXW3 757 aa11.76□□□□□ -0.53
STRC-211ENST00000485556 CCDC39Q9UFE4 941 aa11.76□□□□□ -0.53
STRC-211ENST00000485556 EFCAB6Q5THR3 1501 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 TOM1O60784 492 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 ZNF790Q6PG37 636 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 ANKIB1Q9P2G1 1089 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 SOS1Q07889 1333 aaPredicted RBP11.75□□□□□ -0.53
STRC-211ENST00000485556 RBM5P52756 815 aaKnown RBP eCLIP11.75□□□□□ -0.53
STRC-211ENST00000485556 HAND2P61296 217 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 HECW2Q9P2P5 1572 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 SYCE3A1L190 88 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 GUCY1B3Q02153 619 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 TCEANC2Q96MN5 208 aa11.75□□□□□ -0.53
STRC-211ENST00000485556 CCDC82Q8N4S0 544 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 NUP62CLQ9H1M0 184 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 GDPD2Q9HCC8 539 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 CCT2P78371 535 aaKnown RBP11.74□□□□□ -0.53
STRC-211ENST00000485556 CCDC173Q0VFZ6 552 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
STRC-211ENST00000485556 CCDC43Q96MW1 224 aaKnown RBP11.74□□□□□ -0.53
STRC-211ENST00000485556 CDC5LQ99459 802 aaKnown RBP11.74□□□□□ -0.53
STRC-211ENST00000485556 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 SMC2O95347 1197 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 HMGB1P09429 215 aaKnown RBP11.74□□□□□ -0.53
STRC-211ENST00000485556 ATP6V1AP38606 617 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 TXLNAP40222 546 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 SPC24Q8NBT2 197 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 TSPOAP1O95153 1857 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 ZSCAN29Q8IWY8 852 aaPredicted RBP11.74□□□□□ -0.53
STRC-211ENST00000485556 IL27Q8NEV9 243 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 KDM2BQ8NHM5 1336 aa11.74□□□□□ -0.53
STRC-211ENST00000485556 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.73□□□□□ -0.53
STRC-211ENST00000485556 NOC3LQ8WTT2 800 aaKnown RBP11.73□□□□□ -0.53
STRC-211ENST00000485556 C8orf37Q96NL8 207 aa11.73□□□□□ -0.53
STRC-211ENST00000485556 PPFIA3O75145 1194 aa11.73□□□□□ -0.53
STRC-211ENST00000485556 ATP2B3Q16720 1220 aa11.73□□□□□ -0.53
STRC-211ENST00000485556 DZIP1Q86YF9 867 aaKnown RBP11.73□□□□□ -0.53
STRC-211ENST00000485556 PDILTQ8N807 584 aa11.73□□□□□ -0.53
STRC-211ENST00000485556 TMX3Q96JJ7 454 aa11.73□□□□□ -0.53
STRC-211ENST00000485556 IL15P40933 162 aaPredicted RBP11.73□□□□□ -0.53
STRC-211ENST00000485556 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
STRC-211ENST00000485556 ROBO2Q9HCK4 1378 aa11.73□□□□□ -0.53
STRC-211ENST00000485556 USP5P45974 858 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 NEK1Q96PY6 1258 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 ADCY10Q96PN6 1610 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 USP19O94966 1318 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 RBM8AQ9Y5S9 174 aaKnown RBP11.72□□□□□ -0.53
STRC-211ENST00000485556 PCDH11XQ9BZA7 1347 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 PCDH11YQ9BZA8 1340 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 ABCC3O15438 1527 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 GOLGA8BA8MQT2 603 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 RANBP6O60518 1105 aaKnown RBP11.72□□□□□ -0.53
STRC-211ENST00000485556 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
STRC-211ENST00000485556 HOXB7P09629 217 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 C8orf76Q96K31 380 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 AK7Q96M32 723 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 CEP89Q96ST8 783 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 PRR36Q9H6K5 1346 aa11.72□□□□□ -0.53
STRC-211ENST00000485556 BAG4O95429 457 aaKnown RBP11.71□□□□□ -0.53
STRC-211ENST00000485556 IL17REQ8NFR9 667 aa11.71□□□□□ -0.53
STRC-211ENST00000485556 SCAND2PQ9GZW5 306 aaPredicted RBP11.71□□□□□ -0.53
STRC-211ENST00000485556 IQSEC3Q9UPP2 1182 aaPredicted RBP11.71□□□□□ -0.53
STRC-211ENST00000485556 PLEKHG1Q9ULL1 1385 aa11.71□□□□□ -0.53
STRC-211ENST00000485556 IFIT3O14879 490 aaKnown RBP11.71□□□□□ -0.54
STRC-211ENST00000485556 GJB2P29033 226 aa11.71□□□□□ -0.54
STRC-211ENST00000485556 HMGN5P82970 282 aaKnown RBP11.71□□□□□ -0.54
STRC-211ENST00000485556 SOGA3Q5TF21 947 aa11.71□□□□□ -0.54
STRC-211ENST00000485556 RPGRQ92834 1020 aaKnown RBP11.71□□□□□ -0.54
STRC-211ENST00000485556 NOL7Q9UMY1 257 aaKnown RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms