RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 MAP3K15Q6ZN16 1313 aa16.34■□□□□ 0.21
SDHB-207ENST00000485515 A0A0G2JLW4 131 aa16.33■□□□□ 0.2
SDHB-207ENST00000485515 GTF2E1P29083 439 aaPredicted RBP16.33■□□□□ 0.2
SDHB-207ENST00000485515 ST5P78524 1137 aa16.33■□□□□ 0.2
SDHB-207ENST00000485515 TPTE2Q6XPS3 522 aa16.33■□□□□ 0.2
SDHB-207ENST00000485515 NBPF5PQ86XG9 351 aaPredicted RBP16.33■□□□□ 0.2
SDHB-207ENST00000485515 CNBD1Q8NA66 436 aa16.33■□□□□ 0.2
SDHB-207ENST00000485515 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
SDHB-207ENST00000485515 SCN7AQ01118 1682 aa16.33■□□□□ 0.2
SDHB-207ENST00000485515 ELL2O00472 640 aaPredicted RBP16.32■□□□□ 0.2
SDHB-207ENST00000485515 DPEP1P16444 411 aa16.32■□□□□ 0.2
SDHB-207ENST00000485515 ZBTB3Q9H5J0 574 aa16.32■□□□□ 0.2
SDHB-207ENST00000485515 HYPKQ9NX55 129 aa16.32■□□□□ 0.2
SDHB-207ENST00000485515 PIM2Q9P1W9 311 aa16.32■□□□□ 0.2
SDHB-207ENST00000485515 H0YIN7 160 aa16.31■□□□□ 0.2
SDHB-207ENST00000485515 PDE6BP35913 854 aa16.31■□□□□ 0.2
SDHB-207ENST00000485515 AIMP1Q12904 312 aaKnown RBP16.31■□□□□ 0.2
SDHB-207ENST00000485515 PDIA6Q15084 440 aa16.31■□□□□ 0.2
SDHB-207ENST00000485515 TTLL7Q6ZT98 887 aa16.31■□□□□ 0.2
SDHB-207ENST00000485515 NYXQ9GZU5 481 aa16.31■□□□□ 0.2
SDHB-207ENST00000485515 CHPF2Q9P2E5 772 aa16.31■□□□□ 0.2
SDHB-207ENST00000485515 ANXA1P04083 346 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 GOLGA2Q08379 1002 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 HLFQ16534 295 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 HSP90AB3PQ58FF7 597 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 COPS6Q7L5N1 327 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 TSR2Q969E8 191 aaKnown RBP16.3■□□□□ 0.2
SDHB-207ENST00000485515 BRIP1Q9BX63 1249 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 MYH16Q9H6N6 1097 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 WWC3Q9ULE0 1092 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 BCS1LQ9Y276 419 aa16.3■□□□□ 0.2
SDHB-207ENST00000485515 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 KIF13BQ9NQT8 1826 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 BCORQ6W2J9 1755 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 YBX3P16989 372 aaKnown RBP eCLIP16.29■□□□□ 0.22e-10■■□□□ 12.6
SDHB-207ENST00000485515 YY1P25490 414 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 PROSER3Q2NL68 480 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 PRR5LQ6MZQ0 368 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 GIGYF2Q6Y7W6 1299 aaKnown RBP16.29■□□□□ 0.2
SDHB-207ENST00000485515 XAGE3Q8WTP9 111 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 STK31Q9BXU1 1019 aa16.29■□□□□ 0.2
SDHB-207ENST00000485515 DALRD3Q5D0E6 543 aaKnown RBP16.28■□□□□ 0.2
SDHB-207ENST00000485515 C2CD5Q86YS7 1000 aa16.28■□□□□ 0.2
SDHB-207ENST00000485515 C8orf58Q8NAV2 365 aa16.28■□□□□ 0.2
SDHB-207ENST00000485515 GOLGB1Q14789 3259 aaKnown RBP16.27■□□□□ 0.2
SDHB-207ENST00000485515 FAM177BA6PVY3 158 aa16.27■□□□□ 0.2
SDHB-207ENST00000485515 CHRNA5P30532 468 aa16.27■□□□□ 0.2
SDHB-207ENST00000485515 TWISTNBQ3B726 338 aaPredicted RBP16.27■□□□□ 0.2
SDHB-207ENST00000485515 PARP10Q53GL7 1025 aa16.27■□□□□ 0.2
SDHB-207ENST00000485515 PPP1R42Q7Z4L9 355 aa16.27■□□□□ 0.2
SDHB-207ENST00000485515 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
SDHB-207ENST00000485515 NRXN2Q9P2S2 1712 aa16.26■□□□□ 0.19
SDHB-207ENST00000485515 DDX58O95786 925 aaKnown RBP16.26■□□□□ 0.19
SDHB-207ENST00000485515 GPTP24298 496 aa16.26■□□□□ 0.19
SDHB-207ENST00000485515 ANKRD13DQ6ZTN6 518 aa16.26■□□□□ 0.19
SDHB-207ENST00000485515 LRP10Q7Z4F1 713 aa16.26■□□□□ 0.19
SDHB-207ENST00000485515 ATP10DQ9P241 1426 aa16.26■□□□□ 0.19
SDHB-207ENST00000485515 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
SDHB-207ENST00000485515 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
SDHB-207ENST00000485515 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
SDHB-207ENST00000485515 N4BP2Q86UW6 1770 aaPredicted RBP16.25■□□□□ 0.19
SDHB-207ENST00000485515 UTRNP46939 3433 aa16.25■□□□□ 0.19
SDHB-207ENST00000485515 KCNA3P22001 575 aa16.24■□□□□ 0.19
SDHB-207ENST00000485515 RIC3Q7Z5B4 369 aa16.24■□□□□ 0.19
SDHB-207ENST00000485515 ZNF34Q8IZ26 560 aa16.24■□□□□ 0.19
SDHB-207ENST00000485515 MIER1Q8N108 512 aa16.24■□□□□ 0.19
SDHB-207ENST00000485515 CCDC24Q8N4L8 307 aa16.24■□□□□ 0.19
SDHB-207ENST00000485515 TSPYL6Q8N831 410 aa16.24■□□□□ 0.19
SDHB-207ENST00000485515 TTLL6Q8N841 843 aa16.24■□□□□ 0.19
SDHB-207ENST00000485515 TCIRG1Q13488 830 aa16.23■□□□□ 0.19
SDHB-207ENST00000485515 ARHGAP27Q6ZUM4 889 aa16.23■□□□□ 0.19
SDHB-207ENST00000485515 UTP14AQ9BVJ6 771 aaKnown RBP16.23■□□□□ 0.19
SDHB-207ENST00000485515 NUP98P52948 1817 aa16.22■□□□□ 0.19
SDHB-207ENST00000485515 CNKSR1Q969H4 720 aa16.22■□□□□ 0.19
SDHB-207ENST00000485515 MASTLQ96GX5 879 aa16.22■□□□□ 0.19
SDHB-207ENST00000485515 IBTKQ9P2D0 1353 aaPredicted RBP16.22■□□□□ 0.19
SDHB-207ENST00000485515 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.19
SDHB-207ENST00000485515 SUSD4Q5VX71 490 aa16.21■□□□□ 0.19
SDHB-207ENST00000485515 STYK1Q6J9G0 422 aa16.21■□□□□ 0.19
SDHB-207ENST00000485515 RNF123Q5XPI4 1314 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 UBN2Q6ZU65 1347 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 CHD4Q14839 1912 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 E9PSI1 815 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 SLC4A2P04920 1241 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 SRGNP10124 158 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 NPR1P16066 1061 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
SDHB-207ENST00000485515 PHAXQ9H814 394 aaKnown RBP16.2■□□□□ 0.18
SDHB-207ENST00000485515 KIAA1551Q9HCM1 1747 aa16.19■□□□□ 0.18
SDHB-207ENST00000485515 ERFEQ4G0M1 354 aa16.19■□□□□ 0.18
SDHB-207ENST00000485515 RPGRQ92834 1020 aaKnown RBP16.19■□□□□ 0.18
SDHB-207ENST00000485515 NLRP3Q96P20 1036 aa16.19■□□□□ 0.18
SDHB-207ENST00000485515 TRMT112Q9UI30 125 aaKnown RBP16.19■□□□□ 0.18
SDHB-207ENST00000485515 ZNF521Q96K83 1311 aa16.19■□□□□ 0.18
SDHB-207ENST00000485515 VAMP4O75379 141 aa16.18■□□□□ 0.18
SDHB-207ENST00000485515 NTSR2O95665 410 aa16.18■□□□□ 0.18
SDHB-207ENST00000485515 HSP90B1P14625 803 aaKnown RBP16.18■□□□□ 0.18
SDHB-207ENST00000485515 ALDH1B1P30837 517 aa16.18■□□□□ 0.18
SDHB-207ENST00000485515 SOGA3Q5TF21 947 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms