RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 ZC3H4Q9UPT8 1303 aaKnown RBP33.95■■■■□ 3.03
HLA-F-227ENST00000485513 RGL2O15211 777 aa33.94■■■■□ 3.02
HLA-F-227ENST00000485513 NBPF5PQ86XG9 351 aaPredicted RBP33.94■■■■□ 3.02
HLA-F-227ENST00000485513 NFKBIEO00221 500 aa33.93■■■■□ 3.02
HLA-F-227ENST00000485513 PRELPP51888 382 aa33.93■■■■□ 3.02
HLA-F-227ENST00000485513 DDX10Q13206 875 aaKnown RBP33.93■■■■□ 3.02
HLA-F-227ENST00000485513 C16orf71Q8IYS4 520 aaPredicted RBP33.93■■■■□ 3.02
HLA-F-227ENST00000485513 CCDC88AQ3V6T2 1871 aa33.93■■■■□ 3.02
HLA-F-227ENST00000485513 EIF4A1P60842 406 aaKnown RBP33.92■■■■□ 3.02
HLA-F-227ENST00000485513 C21orf2O43822 256 aa33.91■■■■□ 3.02
HLA-F-227ENST00000485513 ZNF219Q9P2Y4 722 aaPredicted RBP33.91■■■■□ 3.02
HLA-F-227ENST00000485513 NIP7Q9Y221 180 aaKnown RBP eCLIP33.91■■■■□ 3.02
HLA-F-227ENST00000485513 TNRC6CQ9HCJ0 1690 aaKnown RBP33.9■■■■□ 3.02
HLA-F-227ENST00000485513 SRGNP10124 158 aa33.9■■■■□ 3.02
HLA-F-227ENST00000485513 STYK1Q6J9G0 422 aa33.9■■■■□ 3.02
HLA-F-227ENST00000485513 CNKSR1Q969H4 720 aa33.9■■■■□ 3.02
HLA-F-227ENST00000485513 RBM46Q8TBY0 533 aaKnown RBP33.89■■■■□ 3.02
HLA-F-227ENST00000485513 RRAGCQ9HB90 399 aa33.89■■■■□ 3.02
HLA-F-227ENST00000485513 MASTLQ96GX5 879 aa33.88■■■■□ 3.01
HLA-F-227ENST00000485513 CACNA1SQ13698 1873 aa33.87■■■■□ 3.01
HLA-F-227ENST00000485513 HLFQ16534 295 aa33.87■■■■□ 3.01
HLA-F-227ENST00000485513 TPTE2Q6XPS3 522 aa33.87■■■■□ 3.01
HLA-F-227ENST00000485513 TIAM2Q8IVF5 1701 aa33.87■■■■□ 3.01
HLA-F-227ENST00000485513 FER1L6Q2WGJ9 1857 aa33.86■■■■□ 3.01
HLA-F-227ENST00000485513 SLX4Q8IY92 1834 aa33.86■■■■□ 3.01
HLA-F-227ENST00000485513 NGEFQ8N5V2 710 aa33.86■■■■□ 3.01
HLA-F-227ENST00000485513 MYBBP1AQ9BQG0 1328 aaKnown RBP33.85■■■■□ 3.01
HLA-F-227ENST00000485513 APLP1P51693 650 aa33.85■■■■□ 3.01
HLA-F-227ENST00000485513 RIPK4P57078 832 aa33.85■■■■□ 3.01
HLA-F-227ENST00000485513 PRPF40BQ6NWY9 871 aaKnown RBP33.85■■■■□ 3.01
HLA-F-227ENST00000485513 RRP7AQ9Y3A4 280 aaKnown RBP33.85■■■■□ 3.01
HLA-F-227ENST00000485513 ARFGEF2Q9Y6D5 1785 aa33.85■■■■□ 3.01
HLA-F-227ENST00000485513 GLTPD2A6NH11 291 aa33.83■■■■□ 3.01
HLA-F-227ENST00000485513 FAM177BA6PVY3 158 aa33.83■■■■□ 3.01
HLA-F-227ENST00000485513 TSPYL4Q9UJ04 414 aa33.83■■■■□ 3.01
HLA-F-227ENST00000485513 ERVV-1B6SEH8 477 aa33.81■■■■□ 3
HLA-F-227ENST00000485513 MAP3K15Q6ZN16 1313 aa33.8■■■■□ 3
HLA-F-227ENST00000485513 LTBP3Q9NS15 1303 aa33.8■■■■□ 3
HLA-F-227ENST00000485513 KLRG2A4D1S0 409 aaPredicted RBP33.8■■■■□ 3
HLA-F-227ENST00000485513 MYL6BP14649 208 aa33.8■■■■□ 3
HLA-F-227ENST00000485513 NPR1P16066 1061 aa33.8■■■■□ 3
HLA-F-227ENST00000485513 TMPOP42166 694 aaKnown RBP33.8■■■■□ 3
HLA-F-227ENST00000485513 SOGA3Q5TF21 947 aa33.8■■■■□ 3
HLA-F-227ENST00000485513 KIF6Q6ZMV9 814 aa33.8■■■■□ 3
HLA-F-227ENST00000485513 TAOK3Q9H2K8 898 aa33.8■■■■□ 3
HLA-F-227ENST00000485513 DICER1Q9UPY3 1922 aaKnown RBP33.8■■■■□ 3
HLA-F-227ENST00000485513 NUP98P52948 1817 aa33.79■■■■□ 3
HLA-F-227ENST00000485513 LMOD3Q0VAK6 560 aa33.79■■■■□ 3
HLA-F-227ENST00000485513 FSTL1Q12841 308 aa33.79■■■■□ 3
HLA-F-227ENST00000485513 TTLL7Q6ZT98 887 aa33.79■■■■□ 3
HLA-F-227ENST00000485513 GTF2E1P29083 439 aaPredicted RBP33.78■■■■□ 3
HLA-F-227ENST00000485513 ERFEQ4G0M1 354 aa33.77■■■■□ 3
HLA-F-227ENST00000485513 ERBB4Q15303 1308 aa33.77■■■■□ 3
HLA-F-227ENST00000485513 VEGFAP15692 232 aaPredicted RBP33.76■■■□□ 2.99
HLA-F-227ENST00000485513 BABAM1Q9NWV8 329 aa33.76■■■□□ 2.99
HLA-F-227ENST00000485513 DPY19L2Q6NUT2 758 aa33.75■■■□□ 2.99
HLA-F-227ENST00000485513 NYXQ9GZU5 481 aa33.75■■■□□ 2.99
HLA-F-227ENST00000485513 CCDC146Q8IYE0 955 aa33.74■■■□□ 2.99
HLA-F-227ENST00000485513 C7orf43Q8WVR3 580 aa33.74■■■□□ 2.99
HLA-F-227ENST00000485513 ZBTB3Q9H5J0 574 aa33.74■■■□□ 2.99
HLA-F-227ENST00000485513 WDR43Q15061 677 aaKnown RBP eCLIP33.72■■■□□ 2.99
HLA-F-227ENST00000485513 CCDC93Q567U6 631 aa33.72■■■□□ 2.99
HLA-F-227ENST00000485513 SMC1BQ8NDV3 1235 aa33.72■■■□□ 2.99
HLA-F-227ENST00000485513 NEUROD2Q15784 382 aa33.71■■■□□ 2.99
HLA-F-227ENST00000485513 WDR90Q96KV7 1748 aa33.7■■■□□ 2.99
HLA-F-227ENST00000485513 EIF2S2P20042 333 aaKnown RBP33.7■■■□□ 2.99
HLA-F-227ENST00000485513 GPTP24298 496 aa33.7■■■□□ 2.99
HLA-F-227ENST00000485513 NUTM1Q86Y26 1132 aa33.7■■■□□ 2.99
HLA-F-227ENST00000485513 ABCC12Q96J65 1359 aa33.7■■■□□ 2.98
HLA-F-227ENST00000485513 RUNDC1Q96C34 613 aa33.69■■■□□ 2.98
HLA-F-227ENST00000485513 ALDH1B1P30837 517 aa33.68■■■□□ 2.98
HLA-F-227ENST00000485513 UBN2Q6ZU65 1347 aa33.68■■■□□ 2.98
HLA-F-227ENST00000485513 GIGYF2Q6Y7W6 1299 aaKnown RBP33.67■■■□□ 2.98
HLA-F-227ENST00000485513 DNAJC5GQ8N7S2 189 aa33.67■■■□□ 2.98
HLA-F-227ENST00000485513 IBTKQ9P2D0 1353 aaPredicted RBP33.67■■■□□ 2.98
HLA-F-227ENST00000485513 PDIA6Q15084 440 aa33.66■■■□□ 2.98
HLA-F-227ENST00000485513 LRP10Q7Z4F1 713 aa33.66■■■□□ 2.98
HLA-F-227ENST00000485513 ZNF34Q8IZ26 560 aa33.66■■■□□ 2.98
HLA-F-227ENST00000485513 POTECB2RU33 542 aa33.65■■■□□ 2.98
HLA-F-227ENST00000485513 CRY2Q49AN0 593 aa33.65■■■□□ 2.98
HLA-F-227ENST00000485513 SUSD4Q5VX71 490 aa33.65■■■□□ 2.98
HLA-F-227ENST00000485513 FKBP4Q02790 459 aaKnown RBP eCLIP33.64■■■□□ 2.98
HLA-F-227ENST00000485513 OLFM4Q6UX06 510 aa33.64■■■□□ 2.98
HLA-F-227ENST00000485513 ADAMTS8Q9UP79 889 aa33.64■■■□□ 2.98
HLA-F-227ENST00000485513 RIC1Q4ADV7 1423 aa33.63■■■□□ 2.97
HLA-F-227ENST00000485513 PROSER3Q2NL68 480 aa33.63■■■□□ 2.97
HLA-F-227ENST00000485513 RTKN2Q8IZC4 609 aa33.63■■■□□ 2.97
HLA-F-227ENST00000485513 TRIM35Q9UPQ4 493 aa33.63■■■□□ 2.97
HLA-F-227ENST00000485513 CHL1O00533 1208 aa33.62■■■□□ 2.97
HLA-F-227ENST00000485513 ANXA1P04083 346 aa33.62■■■□□ 2.97
HLA-F-227ENST00000485513 HTRA3P83110 453 aa33.62■■■□□ 2.97
HLA-F-227ENST00000485513 PRKRIP1Q9H875 184 aaPredicted RBP33.62■■■□□ 2.97
HLA-F-227ENST00000485513 LAS1LQ9Y4W2 734 aaKnown RBP33.61■■■□□ 2.97
HLA-F-227ENST00000485513 DDNO94850 711 aaPredicted RBP33.6■■■□□ 2.97
HLA-F-227ENST00000485513 NTSR2O95665 410 aa33.6■■■□□ 2.97
HLA-F-227ENST00000485513 PARP10Q53GL7 1025 aa33.6■■■□□ 2.97
HLA-F-227ENST00000485513 PPP1R42Q7Z4L9 355 aa33.6■■■□□ 2.97
HLA-F-227ENST00000485513 NECTIN2Q92692 538 aa33.6■■■□□ 2.97
HLA-F-227ENST00000485513 RPGRQ92834 1020 aaKnown RBP33.6■■■□□ 2.97
HLA-F-227ENST00000485513 ZNF277Q9NRM2 450 aaPredicted RBP33.6■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms