RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ATF7IPQ6VMQ6 1270 aa22.38■■□□□ 1.17
CHMP3-207ENST00000485465 ARHGEF1Q92888 912 aaKnown RBP22.38■■□□□ 1.17
CHMP3-207ENST00000485465 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
CHMP3-207ENST00000485465 UBR3Q6ZT12 1888 aa22.37■■□□□ 1.17
CHMP3-207ENST00000485465 PI4KAP2A4QPH2 592 aa22.37■■□□□ 1.17
CHMP3-207ENST00000485465 TRIM27P14373 513 aa22.37■■□□□ 1.17
CHMP3-207ENST00000485465 PI4KAP1Q8N8J0 262 aa22.37■■□□□ 1.17
CHMP3-207ENST00000485465 PLBD2Q8NHP8 589 aa22.37■■□□□ 1.17
CHMP3-207ENST00000485465 ADCY9O60503 1353 aa22.37■■□□□ 1.17
CHMP3-207ENST00000485465 MAP3K15Q6ZN16 1313 aa22.36■■□□□ 1.17
CHMP3-207ENST00000485465 RIC3Q7Z5B4 369 aa22.36■■□□□ 1.17
CHMP3-207ENST00000485465 ERVV-1B6SEH8 477 aa22.35■■□□□ 1.17
CHMP3-207ENST00000485465 F6X3S4 739 aa22.35■■□□□ 1.17
CHMP3-207ENST00000485465 FLAD1Q8NFF5 587 aa22.35■■□□□ 1.17
CHMP3-207ENST00000485465 ZBTB3Q9H5J0 574 aa22.35■■□□□ 1.17
CHMP3-207ENST00000485465 TNNQ9UQP3 1299 aa22.35■■□□□ 1.17
CHMP3-207ENST00000485465 MAP3K2Q9Y2U5 619 aa22.35■■□□□ 1.17
CHMP3-207ENST00000485465 CAMTA2O94983 1202 aa22.34■■□□□ 1.17
CHMP3-207ENST00000485465 RFC4P35249 363 aa22.34■■□□□ 1.17
CHMP3-207ENST00000485465 DNAAF4Q8WXU2 420 aa22.34■■□□□ 1.17
CHMP3-207ENST00000485465 NARFQ9UHQ1 456 aa22.34■■□□□ 1.17
CHMP3-207ENST00000485465 PNPLA7Q6ZV29 1317 aa22.32■■□□□ 1.16
CHMP3-207ENST00000485465 ZPR1O75312 459 aa22.32■■□□□ 1.16
CHMP3-207ENST00000485465 MS4A1P11836 297 aa22.32■■□□□ 1.16
CHMP3-207ENST00000485465 HLFQ16534 295 aa22.32■■□□□ 1.16
CHMP3-207ENST00000485465 COL23A1Q86Y22 540 aaPredicted RBP22.32■■□□□ 1.16
CHMP3-207ENST00000485465 DZIP1LQ8IYY4 767 aaKnown RBP22.32■■□□□ 1.16
CHMP3-207ENST00000485465 CLUAP1Q96AJ1 413 aa22.32■■□□□ 1.16
CHMP3-207ENST00000485465 SRP68Q9UHB9 627 aaKnown RBP22.32■■□□□ 1.16
CHMP3-207ENST00000485465 ABCC4O15439 1325 aa22.31■■□□□ 1.16
CHMP3-207ENST00000485465 USP42Q9H9J4 1324 aaKnown RBP22.31■■□□□ 1.16
CHMP3-207ENST00000485465 PDE3AQ14432 1141 aa22.31■■□□□ 1.16
CHMP3-207ENST00000485465 USPL1Q5W0Q7 1092 aa22.31■■□□□ 1.16
CHMP3-207ENST00000485465 SLC4A10Q6U841 1118 aa22.31■■□□□ 1.16
CHMP3-207ENST00000485465 GIGYF2Q6Y7W6 1299 aaKnown RBP22.31■■□□□ 1.16
CHMP3-207ENST00000485465 METTL22Q9BUU2 404 aaPredicted RBP22.31■■□□□ 1.16
CHMP3-207ENST00000485465 TUBGCP6Q96RT7 1819 aa22.31■■□□□ 1.16
CHMP3-207ENST00000485465 RGL2O15211 777 aa22.3■■□□□ 1.16
CHMP3-207ENST00000485465 C20orf194Q5TEA3 1177 aa22.3■■□□□ 1.16
CHMP3-207ENST00000485465 FTSJ3Q8IY81 847 aaKnown RBP22.3■■□□□ 1.16
CHMP3-207ENST00000485465 C4AP0C0L4 1744 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 MSH5O43196 834 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 RLBP1P12271 317 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 CLEC4GQ6UXB4 293 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 PANK1Q8TE04 598 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 MYD88Q99836 296 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 BCL2L12Q9HB09 334 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 ZNF652Q9Y2D9 606 aa22.29■■□□□ 1.16
CHMP3-207ENST00000485465 QSER1Q2KHR3 1735 aa22.28■■□□□ 1.16
CHMP3-207ENST00000485465 ARFGEF2Q9Y6D5 1785 aa22.28■■□□□ 1.16
CHMP3-207ENST00000485465 NEXNQ0ZGT2 675 aa22.28■■□□□ 1.16
CHMP3-207ENST00000485465 TCIRG1Q13488 830 aa22.28■■□□□ 1.16
CHMP3-207ENST00000485465 HSP90AB3PQ58FF7 597 aa22.28■■□□□ 1.16
CHMP3-207ENST00000485465 BEND3Q5T5X7 828 aa22.28■■□□□ 1.16
CHMP3-207ENST00000485465 PXDNLA1KZ92 1463 aa22.28■■□□□ 1.16
CHMP3-207ENST00000485465 BCORQ6W2J9 1755 aa22.27■■□□□ 1.16
CHMP3-207ENST00000485465 CCT4P50991 539 aaKnown RBP22.27■■□□□ 1.16
CHMP3-207ENST00000485465 INTS3Q68E01 1043 aaKnown RBP22.27■■□□□ 1.16
CHMP3-207ENST00000485465 TMEM57Q8N5G2 664 aa22.27■■□□□ 1.16
CHMP3-207ENST00000485465 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
CHMP3-207ENST00000485465 ATP10DQ9P241 1426 aa22.26■■□□□ 1.15
CHMP3-207ENST00000485465 IGKV5-2P06315 115 aa22.26■■□□□ 1.15
CHMP3-207ENST00000485465 GYS1P13807 737 aa22.26■■□□□ 1.15
CHMP3-207ENST00000485465 LINS1Q8NG48 757 aa22.26■■□□□ 1.15
CHMP3-207ENST00000485465 ATP5J2-PTCD1G3V325 749 aa22.25■■□□□ 1.15
CHMP3-207ENST00000485465 ISCA1Q9BUE6 129 aa22.25■■□□□ 1.15
CHMP3-207ENST00000485465 SRCIN1Q9C0H9 1055 aa22.25■■□□□ 1.15
CHMP3-207ENST00000485465 SOCS7O14512 581 aa22.24■■□□□ 1.15
CHMP3-207ENST00000485465 TRIM28Q13263 835 aaKnown RBP22.24■■□□□ 1.15
CHMP3-207ENST00000485465 FKBP8Q14318 412 aa22.24■■□□□ 1.15
CHMP3-207ENST00000485465 ZNF34Q8IZ26 560 aa22.24■■□□□ 1.15
CHMP3-207ENST00000485465 NUP98P52948 1817 aa22.23■■□□□ 1.15
CHMP3-207ENST00000485465 NEURL1BA8MQ27 555 aa22.23■■□□□ 1.15
CHMP3-207ENST00000485465 ALDH1L1O75891 902 aa22.23■■□□□ 1.15
CHMP3-207ENST00000485465 R3HDM1Q15032 1099 aaKnown RBP22.23■■□□□ 1.15
CHMP3-207ENST00000485465 CWF19L2Q2TBE0 894 aaKnown RBP22.23■■□□□ 1.15
CHMP3-207ENST00000485465 COG6Q9Y2V7 657 aa22.23■■□□□ 1.15
CHMP3-207ENST00000485465 GPTP24298 496 aa22.22■■□□□ 1.15
CHMP3-207ENST00000485465 TBC1D9BQ66K14 1250 aa22.22■■□□□ 1.15
CHMP3-207ENST00000485465 ITPRIPQ8IWB1 547 aa22.22■■□□□ 1.15
CHMP3-207ENST00000485465 PDGFDQ9GZP0 370 aaPredicted RBP22.22■■□□□ 1.15
CHMP3-207ENST00000485465 NIP7Q9Y221 180 aaKnown RBP eCLIP22.22■■□□□ 1.15
CHMP3-207ENST00000485465 MVPQ14764 893 aaKnown RBP22.21■■□□□ 1.15
CHMP3-207ENST00000485465 NLRP10Q86W26 655 aa22.21■■□□□ 1.15
CHMP3-207ENST00000485465 NLGN1Q8N2Q7 840 aa22.21■■□□□ 1.15
CHMP3-207ENST00000485465 CCDC191Q8NCU4 936 aa22.21■■□□□ 1.15
CHMP3-207ENST00000485465 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.14
CHMP3-207ENST00000485465 BICDL1Q6ZP65 573 aa22.2■■□□□ 1.14
CHMP3-207ENST00000485465 CWC25Q9NXE8 425 aaPredicted RBP22.2■■□□□ 1.14
CHMP3-207ENST00000485465 UBN2Q6ZU65 1347 aa22.2■■□□□ 1.14
CHMP3-207ENST00000485465 GCKRQ14397 625 aa22.19■■□□□ 1.14
CHMP3-207ENST00000485465 NFIXQ14938 502 aa22.19■■□□□ 1.14
CHMP3-207ENST00000485465 PARP10Q53GL7 1025 aa22.19■■□□□ 1.14
CHMP3-207ENST00000485465 SLC16A10Q8TF71 515 aa22.19■■□□□ 1.14
CHMP3-207ENST00000485465 CRBNQ96SW2 442 aa22.19■■□□□ 1.14
CHMP3-207ENST00000485465 SETDB2Q96T68 719 aa22.19■■□□□ 1.14
CHMP3-207ENST00000485465 IBTKQ9P2D0 1353 aaPredicted RBP22.19■■□□□ 1.14
CHMP3-207ENST00000485465 ANKRD36CQ5JPF3 1778 aa22.19■■□□□ 1.14
CHMP3-207ENST00000485465 N4BP2Q86UW6 1770 aaPredicted RBP22.18■■□□□ 1.14
CHMP3-207ENST00000485465 TM4SF1P30408 202 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms