RNA–Protein interactions for RNA: ENST00000484487.1

PDZRN3-209, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 3

Gene PDZRN3, Length 406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-209ENST00000484487 ARFGEF2Q9Y6D5 1785 aa8.27□□□□□ -1.08
PDZRN3-209ENST00000484487 NUP98P52948 1817 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 ATMINO43313 823 aaPredicted RBP8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 TRIM37O94972 964 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 DDX58O95786 925 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 SLC27A3Q5K4L6 730 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 ERICH6BQ5W0A0 696 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 ATF7IPQ6VMQ6 1270 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 NPM2Q86SE8 214 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 DNAJC10Q8IXB1 793 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 FTSJ3Q8IY81 847 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 PELP1Q8IZL8 1130 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 SPOCK2Q92563 424 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 NECTIN2Q92692 538 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 CHPF2Q9P2E5 772 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 NOB1Q9ULX3 412 aaKnown RBP8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 USP16Q9Y5T5 823 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 ANKRD36CQ5JPF3 1778 aa8.27□□□□□ -1.09
PDZRN3-209ENST00000484487 NUP188Q5SRE5 1749 aa8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 TCERG1O14776 1098 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 PLSCR1O15162 318 aa8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 CYP19A1P11511 503 aaPredicted RBP8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 FLIIQ13045 1269 aa8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 GSE1Q14687 1217 aa8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 ASTLQ6HA08 431 aaPredicted RBP8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 DZIP1LQ8IYY4 767 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 CHMP4BQ9H444 224 aaKnown RBP8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 EP400Q96L91 3159 aa8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 C4BP0C0L5 1744 aa8.26□□□□□ -1.09
PDZRN3-209ENST00000484487 PRAMEF22A3QJZ6 481 aa8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 APBA3O96018 575 aa8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 SF3B2Q13435 895 aaKnown RBP8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 FKBP5Q13451 457 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 AAMPQ13685 434 aa8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 RC3H1Q5TC82 1133 aaKnown RBP8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 CCDC125Q86Z20 511 aa8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 CCNL1Q9UK58 526 aaPredicted RBP8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 UBR3Q6ZT12 1888 aa8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 PXDNLA1KZ92 1463 aa8.25□□□□□ -1.09
PDZRN3-209ENST00000484487 A0A087WZG4 1122 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 PLIN1O60240 522 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 A1BGP04217 495 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 TRIM27P14373 513 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 MYL6BP14649 208 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 IL6STP40189 918 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 ATN1P54259 1190 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 PDIA6Q15084 440 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 KSR2Q6VAB6 950 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 PTF1AQ7RTS3 328 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 IFNL1Q8IU54 200 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 SLC4A9Q96Q91 983 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 SGIP1Q9BQI5 828 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 BMP2KQ9NSY1 1161 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 CCDC87Q9NVE4 849 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 CIZ1Q9ULV3 898 aaPredicted RBP8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 CNTNAP4Q9C0A0 1308 aa8.24□□□□□ -1.09
PDZRN3-209ENST00000484487 QSER1Q2KHR3 1735 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 BCORQ6W2J9 1755 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 NBPF26B4DH59 902 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 CCT4P50991 539 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 ITPK1Q13572 414 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 NBPF14Q5TI25 921 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 NBPF10Q6P3W6 841 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 KIF6Q6ZMV9 814 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 ANKRD13DQ6ZTN6 518 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 COPS6Q7L5N1 327 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 G2E3Q7L622 706 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 NBPF15Q8N660 670 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 PHAXQ9H814 394 aaKnown RBP8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 DDX19BQ9UMR2 479 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 ABCC4O15439 1325 aa8.23□□□□□ -1.09
PDZRN3-209ENST00000484487 ANXA1P04083 346 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 TIE1P35590 1138 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 CRKLP46109 303 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 BAG6P46379 1132 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 NEXNQ0ZGT2 675 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 AIMP1Q12904 312 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 TXNRD1Q16881 649 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 PROSER3Q2NL68 480 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 INTS5Q6P9B9 1019 aaKnown RBP8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 PLBD2Q8NHP8 589 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 XAGE3Q8WTP9 111 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 DNAAF4Q8WXU2 420 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 SLC39A7Q92504 469 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 CLUAP1Q96AJ1 413 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 HDAC5Q9UQL6 1122 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 C4AP0C0L4 1744 aa8.22□□□□□ -1.09
PDZRN3-209ENST00000484487 ATP10DQ9P241 1426 aa8.21□□□□□ -1.09
PDZRN3-209ENST00000484487 MYH3P11055 1940 aa8.21□□□□□ -1.09
PDZRN3-209ENST00000484487 PI4KAP2A4QPH2 592 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 RGL2O15211 777 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 RPS6KA4O75676 772 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 EIF5P55010 431 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 MVPQ14764 893 aaKnown RBP8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 HSP90AB3PQ58FF7 597 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 SLC4A10Q6U841 1118 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 LRP10Q7Z4F1 713 aa8.21□□□□□ -1.1
PDZRN3-209ENST00000484487 ITPRIPQ8IWB1 547 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms