RNA–Protein interactions for RNA: ENST00000483981.2

SHANK1-208, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 3

Gene SHANK1, Length 422 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-208ENST00000483981 NPM2Q86SE8 214 aaKnown RBP15.95■□□□□ 0.14
SHANK1-208ENST00000483981 NECTIN2Q92692 538 aa15.95■□□□□ 0.14
SHANK1-208ENST00000483981 MAP3K15Q6ZN16 1313 aa15.94■□□□□ 0.14
SHANK1-208ENST00000483981 SERPINB2P05120 415 aa15.94■□□□□ 0.14
SHANK1-208ENST00000483981 HDGFL1Q5TGJ6 251 aa15.94■□□□□ 0.14
SHANK1-208ENST00000483981 CHPF2Q9P2E5 772 aa15.94■□□□□ 0.14
SHANK1-208ENST00000483981 PXDNLA1KZ92 1463 aa15.94■□□□□ 0.14
SHANK1-208ENST00000483981 FANCIQ9NVI1 1328 aa15.94■□□□□ 0.14
SHANK1-208ENST00000483981 ELL2O00472 640 aaPredicted RBP15.93■□□□□ 0.14
SHANK1-208ENST00000483981 KCNA3P22001 575 aa15.93■□□□□ 0.14
SHANK1-208ENST00000483981 TGFB2P61812 414 aa15.93■□□□□ 0.14
SHANK1-208ENST00000483981 BICDL1Q6ZP65 573 aa15.93■□□□□ 0.14
SHANK1-208ENST00000483981 NUP98P52948 1817 aa15.93■□□□□ 0.14
SHANK1-208ENST00000483981 CARMIL3Q8ND23 1372 aa15.92■□□□□ 0.14
SHANK1-208ENST00000483981 COPS6Q7L5N1 327 aa15.92■□□□□ 0.14
SHANK1-208ENST00000483981 SETDB2Q96T68 719 aa15.92■□□□□ 0.14
SHANK1-208ENST00000483981 DBF4Q9UBU7 674 aaPredicted RBP15.92■□□□□ 0.14
SHANK1-208ENST00000483981 ATP10DQ9P241 1426 aa15.92■□□□□ 0.14
SHANK1-208ENST00000483981 N4BP2Q86UW6 1770 aaPredicted RBP15.91■□□□□ 0.14
SHANK1-208ENST00000483981 XAGE3Q8WTP9 111 aa15.91■□□□□ 0.14
SHANK1-208ENST00000483981 ZNF652Q9Y2D9 606 aa15.91■□□□□ 0.14
SHANK1-208ENST00000483981 GOLGB1Q14789 3259 aaKnown RBP15.91■□□□□ 0.14
SHANK1-208ENST00000483981 A0A0G2JLW4 131 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 DPEP1P16444 411 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 YBX3P16989 372 aaKnown RBP eCLIP15.9■□□□□ 0.14
SHANK1-208ENST00000483981 PRR5LQ6MZQ0 368 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 GIGYF2Q6Y7W6 1299 aaKnown RBP15.9■□□□□ 0.14
SHANK1-208ENST00000483981 KIF6Q6ZMV9 814 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 ZNF34Q8IZ26 560 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 ZBTB3Q9H5J0 574 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 UTRNP46939 3433 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 BRCA1P38398 1863 aaKnown RBP15.9■□□□□ 0.14
SHANK1-208ENST00000483981 ANKRD31Q8N7Z5 1873 aa15.9■□□□□ 0.14
SHANK1-208ENST00000483981 VAMP4O75379 141 aa15.89■□□□□ 0.13
SHANK1-208ENST00000483981 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
SHANK1-208ENST00000483981 NIP7Q9Y221 180 aaKnown RBP eCLIP15.89■□□□□ 0.13
SHANK1-208ENST00000483981 EXOSC9Q06265 439 aaKnown RBP15.88■□□□□ 0.13
SHANK1-208ENST00000483981 GOLGA2Q08379 1002 aa15.88■□□□□ 0.13
SHANK1-208ENST00000483981 TWISTNBQ3B726 338 aaPredicted RBP15.88■□□□□ 0.13
SHANK1-208ENST00000483981 UBN2Q6ZU65 1347 aa15.88■□□□□ 0.13
SHANK1-208ENST00000483981 AIMP1Q12904 312 aaKnown RBP15.87■□□□□ 0.13
SHANK1-208ENST00000483981 CCDC30Q5VVM6 783 aa15.87■□□□□ 0.13
SHANK1-208ENST00000483981 CCDC24Q8N4L8 307 aa15.87■□□□□ 0.13
SHANK1-208ENST00000483981 BRIP1Q9BX63 1249 aa15.87■□□□□ 0.13
SHANK1-208ENST00000483981 PHAXQ9H814 394 aaKnown RBP15.87■□□□□ 0.13
SHANK1-208ENST00000483981 CHRNA5P30532 468 aa15.86■□□□□ 0.13
SHANK1-208ENST00000483981 SLFN5Q08AF3 891 aa15.86■□□□□ 0.13
SHANK1-208ENST00000483981 TRMT2AQ8IZ69 625 aaKnown RBP15.86■□□□□ 0.13
SHANK1-208ENST00000483981 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
SHANK1-208ENST00000483981 PLBD2Q8NHP8 589 aa15.86■□□□□ 0.13
SHANK1-208ENST00000483981 MYH16Q9H6N6 1097 aa15.86■□□□□ 0.13
SHANK1-208ENST00000483981 DLEC1Q9Y238 1755 aa15.85■□□□□ 0.13
SHANK1-208ENST00000483981 KLRG2A4D1S0 409 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-208ENST00000483981 GPTP24298 496 aa15.85■□□□□ 0.13
SHANK1-208ENST00000483981 TCIRG1Q13488 830 aa15.85■□□□□ 0.13
SHANK1-208ENST00000483981 GPR162Q16538 588 aa15.85■□□□□ 0.13
SHANK1-208ENST00000483981 SUSD4Q5VX71 490 aa15.85■□□□□ 0.13
SHANK1-208ENST00000483981 ANKRD13DQ6ZTN6 518 aa15.85■□□□□ 0.13
SHANK1-208ENST00000483981 NBPF5PQ86XG9 351 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-208ENST00000483981 CHMP4AQ9BY43 222 aa15.85■□□□□ 0.13
SHANK1-208ENST00000483981 IBTKQ9P2D0 1353 aaPredicted RBP15.85■□□□□ 0.13
SHANK1-208ENST00000483981 TPTE2Q6XPS3 522 aa15.84■□□□□ 0.13
SHANK1-208ENST00000483981 CDCA7LQ96GN5 454 aa15.84■□□□□ 0.13
SHANK1-208ENST00000483981 ANKRD36CQ5JPF3 1778 aa15.84■□□□□ 0.13
SHANK1-208ENST00000483981 DCAF8L1A6NGE4 600 aa15.83■□□□□ 0.12
SHANK1-208ENST00000483981 E9PSI1 815 aa15.83■□□□□ 0.12
SHANK1-208ENST00000483981 TCERG1O14776 1098 aaKnown RBP15.83■□□□□ 0.12
SHANK1-208ENST00000483981 NTSR2O95665 410 aa15.83■□□□□ 0.12
SHANK1-208ENST00000483981 ISCA1Q9BUE6 129 aa15.83■□□□□ 0.12
SHANK1-208ENST00000483981 PIM2Q9P1W9 311 aa15.83■□□□□ 0.12
SHANK1-208ENST00000483981 WWC3Q9ULE0 1092 aa15.83■□□□□ 0.12
SHANK1-208ENST00000483981 COL11A2P13942 1736 aaPredicted RBP15.82■□□□□ 0.12
SHANK1-208ENST00000483981 ARFGEF2Q9Y6D5 1785 aa15.82■□□□□ 0.12
SHANK1-208ENST00000483981 PARP10Q53GL7 1025 aa15.82■□□□□ 0.12
SHANK1-208ENST00000483981 HSP90AB3PQ58FF7 597 aa15.82■□□□□ 0.12
SHANK1-208ENST00000483981 G2E3Q7L622 706 aa15.82■□□□□ 0.12
SHANK1-208ENST00000483981 NLRP10Q86W26 655 aa15.82■□□□□ 0.12
SHANK1-208ENST00000483981 C2CD5Q86YS7 1000 aa15.82■□□□□ 0.12
SHANK1-208ENST00000483981 FAM177BA6PVY3 158 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 GRIN3BO60391 1043 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 SRGNP10124 158 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 PDE6BP35913 854 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 ST5P78524 1137 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 TRIM28Q13263 835 aaKnown RBP15.81■□□□□ 0.12
SHANK1-208ENST00000483981 ERFEQ4G0M1 354 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 NUTM1Q86Y26 1132 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 PELP1Q8IZL8 1130 aaKnown RBP15.81■□□□□ 0.12
SHANK1-208ENST00000483981 ABCC12Q96J65 1359 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 NYXQ9GZU5 481 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
SHANK1-208ENST00000483981 CACNA1FO60840 1977 aa15.8■□□□□ 0.12
SHANK1-208ENST00000483981 ARFGEF1Q9Y6D6 1849 aa15.8■□□□□ 0.12
SHANK1-208ENST00000483981 TNRC6CQ9HCJ0 1690 aaKnown RBP15.8■□□□□ 0.12
SHANK1-208ENST00000483981 RIC1Q4ADV7 1423 aa15.8■□□□□ 0.12
SHANK1-208ENST00000483981 H0YIN7 160 aa15.8■□□□□ 0.12
SHANK1-208ENST00000483981 SLC10A5Q5PT55 438 aa15.8■□□□□ 0.12
SHANK1-208ENST00000483981 STK31Q9BXU1 1019 aa15.8■□□□□ 0.12
SHANK1-208ENST00000483981 BCS1LQ9Y276 419 aa15.8■□□□□ 0.12
SHANK1-208ENST00000483981 ADCY9O60503 1353 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms