RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 SCN7AQ01118 1682 aa12.53□□□□□ -0.4
HMG20B-210ENST00000483417 ZNF521Q96K83 1311 aa12.53□□□□□ -0.4
HMG20B-210ENST00000483417 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.41
HMG20B-210ENST00000483417 HNRNPUQ00839 825 aaKnown RBP eCLIP12.52□□□□□ -0.41
HMG20B-210ENST00000483417 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
HMG20B-210ENST00000483417 C2CD5Q86YS7 1000 aa12.52□□□□□ -0.41
HMG20B-210ENST00000483417 TSR2Q969E8 191 aaKnown RBP12.52□□□□□ -0.41
HMG20B-210ENST00000483417 SETDB2Q96T68 719 aa12.52□□□□□ -0.41
HMG20B-210ENST00000483417 GPBP1L1Q9HC44 474 aaPredicted RBP12.52□□□□□ -0.41
HMG20B-210ENST00000483417 MBIPQ9NS73 344 aa12.52□□□□□ -0.41
HMG20B-210ENST00000483417 H0YIN7 160 aa12.51□□□□□ -0.41
HMG20B-210ENST00000483417 KIF3CO14782 793 aa12.51□□□□□ -0.41
HMG20B-210ENST00000483417 NCBP3Q53F19 620 aaKnown RBP12.51□□□□□ -0.41
HMG20B-210ENST00000483417 WDR63Q8IWG1 891 aa12.51□□□□□ -0.41
HMG20B-210ENST00000483417 CCDC24Q8N4L8 307 aa12.51□□□□□ -0.41
HMG20B-210ENST00000483417 CFAP44Q96MT7 982 aa12.51□□□□□ -0.41
HMG20B-210ENST00000483417 BABAM1Q9NWV8 329 aa12.51□□□□□ -0.41
HMG20B-210ENST00000483417 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
HMG20B-210ENST00000483417 PDE6BP35913 854 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 PRELPP51888 382 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 HLFQ16534 295 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 C9orf131Q5VYM1 1079 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 NPM2Q86SE8 214 aaKnown RBP12.5□□□□□ -0.41
HMG20B-210ENST00000483417 TTLL6Q8N841 843 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 C8orf58Q8NAV2 365 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 ZNF526Q8TF50 670 aaPredicted RBP12.5□□□□□ -0.41
HMG20B-210ENST00000483417 PDZRN3Q9UPQ7 1066 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 BCORQ6W2J9 1755 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 ANKRD31Q8N7Z5 1873 aa12.5□□□□□ -0.41
HMG20B-210ENST00000483417 DLEC1Q9Y238 1755 aa12.49□□□□□ -0.41
HMG20B-210ENST00000483417 KLRG2A4D1S0 409 aaPredicted RBP12.49□□□□□ -0.41
HMG20B-210ENST00000483417 ELL2O00472 640 aaPredicted RBP12.49□□□□□ -0.41
HMG20B-210ENST00000483417 LRP10Q7Z4F1 713 aa12.49□□□□□ -0.41
HMG20B-210ENST00000483417 TSPYL6Q8N831 410 aa12.49□□□□□ -0.41
HMG20B-210ENST00000483417 ERVV-1B6SEH8 477 aa12.48□□□□□ -0.41
HMG20B-210ENST00000483417 SRGNP10124 158 aa12.48□□□□□ -0.41
HMG20B-210ENST00000483417 SLFN5Q08AF3 891 aa12.48□□□□□ -0.41
HMG20B-210ENST00000483417 PDIA6Q15084 440 aa12.48□□□□□ -0.41
HMG20B-210ENST00000483417 CNBD1Q8NA66 436 aa12.48□□□□□ -0.41
HMG20B-210ENST00000483417 YTHDC1Q96MU7 727 aaKnown RBP12.48□□□□□ -0.41
HMG20B-210ENST00000483417 IFT57Q9NWB7 429 aa12.48□□□□□ -0.41
HMG20B-210ENST00000483417 ZNF652Q9Y2D9 606 aa12.48□□□□□ -0.41
HMG20B-210ENST00000483417 GNAI1P63096 354 aa12.47□□□□□ -0.41
HMG20B-210ENST00000483417 TTLL7Q6ZT98 887 aa12.47□□□□□ -0.41
HMG20B-210ENST00000483417 TRMT2AQ8IZ69 625 aaKnown RBP12.47□□□□□ -0.41
HMG20B-210ENST00000483417 NIP7Q9Y221 180 aaKnown RBP eCLIP12.47□□□□□ -0.41
HMG20B-210ENST00000483417 LAMB4A4D0S4 1761 aa12.47□□□□□ -0.41
HMG20B-210ENST00000483417 SBF1O95248 1867 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 ERBB4Q15303 1308 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 MAP3K15Q6ZN16 1313 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 NFKBIEO00221 500 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 GOLGA2Q08379 1002 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 STYK1Q6J9G0 422 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 TPTE2Q6XPS3 522 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 NBPF5PQ86XG9 351 aaPredicted RBP12.46□□□□□ -0.41
HMG20B-210ENST00000483417 NGEFQ8N5V2 710 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 NECTIN2Q92692 538 aa12.46□□□□□ -0.41
HMG20B-210ENST00000483417 ZNF622Q969S3 477 aaKnown RBP eCLIP12.46□□□□□ -0.412e-10■□□□□ 9.8
HMG20B-210ENST00000483417 IL16Q14005 1332 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 MYL6BP14649 208 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 EIF2S2P20042 333 aaKnown RBP12.45□□□□□ -0.42
HMG20B-210ENST00000483417 ST5P78524 1137 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 RASSF7Q02833 373 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 EXOSC9Q06265 439 aaKnown RBP12.45□□□□□ -0.42
HMG20B-210ENST00000483417 C7orf43Q8WVR3 580 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 MASTLQ96GX5 879 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 NMRK2Q9NPI5 230 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 RNF181Q9P0P0 153 aa12.45□□□□□ -0.42
HMG20B-210ENST00000483417 COL11A2P13942 1736 aaPredicted RBP12.45□□□□□ -0.42
HMG20B-210ENST00000483417 TCERG1O14776 1098 aaKnown RBP12.44□□□□□ -0.42
HMG20B-210ENST00000483417 C21orf2O43822 256 aa12.44□□□□□ -0.42
HMG20B-210ENST00000483417 LMNB1P20700 586 aa12.44□□□□□ -0.42
HMG20B-210ENST00000483417 CALD1Q05682 793 aaKnown RBP12.44□□□□□ -0.42
HMG20B-210ENST00000483417 DUSP27Q5VZP5 1158 aa12.44□□□□□ -0.42
HMG20B-210ENST00000483417 ZNF34Q8IZ26 560 aa12.44□□□□□ -0.42
HMG20B-210ENST00000483417 CNKSR1Q969H4 720 aa12.44□□□□□ -0.42
HMG20B-210ENST00000483417 FANCIQ9NVI1 1328 aa12.43□□□□□ -0.42
HMG20B-210ENST00000483417 VAMP4O75379 141 aa12.43□□□□□ -0.42
HMG20B-210ENST00000483417 TOMM70O94826 608 aa12.43□□□□□ -0.42
HMG20B-210ENST00000483417 ANXA1P04083 346 aa12.43□□□□□ -0.42
HMG20B-210ENST00000483417 PROSER3Q2NL68 480 aa12.43□□□□□ -0.42
HMG20B-210ENST00000483417 UBN2Q6ZU65 1347 aa12.42□□□□□ -0.42
HMG20B-210ENST00000483417 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
HMG20B-210ENST00000483417 SLX4Q8IY92 1834 aa12.42□□□□□ -0.42
HMG20B-210ENST00000483417 NPR1P16066 1061 aa12.42□□□□□ -0.42
HMG20B-210ENST00000483417 SUSD4Q5VX71 490 aa12.42□□□□□ -0.42
HMG20B-210ENST00000483417 PRPF40BQ6NWY9 871 aaKnown RBP12.42□□□□□ -0.42
HMG20B-210ENST00000483417 GIGYF2Q6Y7W6 1299 aaKnown RBP12.42□□□□□ -0.42
HMG20B-210ENST00000483417 ZBTB3Q9H5J0 574 aa12.42□□□□□ -0.42
HMG20B-210ENST00000483417 NUP98P52948 1817 aa12.41□□□□□ -0.42
HMG20B-210ENST00000483417 LTBP3Q9NS15 1303 aa12.41□□□□□ -0.42
HMG20B-210ENST00000483417 FAM177BA6PVY3 158 aa12.41□□□□□ -0.42
HMG20B-210ENST00000483417 E9PSI1 815 aa12.41□□□□□ -0.42
HMG20B-210ENST00000483417 NPHP1O15259 732 aa12.41□□□□□ -0.42
HMG20B-210ENST00000483417 CRY2Q49AN0 593 aa12.41□□□□□ -0.42
HMG20B-210ENST00000483417 KIF6Q6ZMV9 814 aa12.41□□□□□ -0.42
HMG20B-210ENST00000483417 ZNF219Q9P2Y4 722 aaPredicted RBP12.41□□□□□ -0.42
HMG20B-210ENST00000483417 KDM2BQ8NHM5 1336 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 FER1L6Q2WGJ9 1857 aa12.4□□□□□ -0.42
HMG20B-210ENST00000483417 GLTPD2A6NH11 291 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms