RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 GYS1P13807 737 aa22.85■■□□□ 1.25
CPNE1-224ENST00000483359 ATF5Q9Y2D1 282 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-224ENST00000483359 BCL2L12Q9HB09 334 aa22.83■■□□□ 1.25
CPNE1-224ENST00000483359 MAP3K15Q6ZN16 1313 aa22.83■■□□□ 1.25
CPNE1-224ENST00000483359 RARSP54136 660 aaKnown RBP22.83■■□□□ 1.24
CPNE1-224ENST00000483359 FLIIQ13045 1269 aa22.83■■□□□ 1.24
CPNE1-224ENST00000483359 FKBP8Q14318 412 aa22.83■■□□□ 1.24
CPNE1-224ENST00000483359 HLFQ16534 295 aa22.83■■□□□ 1.24
CPNE1-224ENST00000483359 SRCAPQ6ZRS2 3230 aa22.83■■□□□ 1.24
CPNE1-224ENST00000483359 ZNF428Q96B54 188 aa22.83■■□□□ 1.24
CPNE1-224ENST00000483359 MRPL50Q8N5N7 158 aaKnown RBP22.82■■□□□ 1.24
CPNE1-224ENST00000483359 ALDH1L2Q3SY69 923 aa22.81■■□□□ 1.24
CPNE1-224ENST00000483359 BICDL1Q6ZP65 573 aa22.81■■□□□ 1.24
CPNE1-224ENST00000483359 MTFR1LQ9H019 292 aa22.81■■□□□ 1.24
CPNE1-224ENST00000483359 FKBP5Q13451 457 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-224ENST00000483359 SLC16A10Q8TF71 515 aa22.81■■□□□ 1.24
CPNE1-224ENST00000483359 CACNA1FO60840 1977 aa22.81■■□□□ 1.24
CPNE1-224ENST00000483359 ANKRD13DQ6ZTN6 518 aa22.8■■□□□ 1.24
CPNE1-224ENST00000483359 ARFGEF2Q9Y6D5 1785 aa22.8■■□□□ 1.24
CPNE1-224ENST00000483359 BCAR3O75815 825 aa22.8■■□□□ 1.24
CPNE1-224ENST00000483359 NUP98P52948 1817 aa22.79■■□□□ 1.24
CPNE1-224ENST00000483359 RIC3Q7Z5B4 369 aa22.79■■□□□ 1.24
CPNE1-224ENST00000483359 ZNF652Q9Y2D9 606 aa22.79■■□□□ 1.24
CPNE1-224ENST00000483359 TBC1D9BQ66K14 1250 aa22.78■■□□□ 1.24
CPNE1-224ENST00000483359 ERVV-1B6SEH8 477 aa22.78■■□□□ 1.24
CPNE1-224ENST00000483359 DDX58O95786 925 aaKnown RBP22.78■■□□□ 1.24
CPNE1-224ENST00000483359 NLGN1Q8N2Q7 840 aa22.78■■□□□ 1.24
CPNE1-224ENST00000483359 PLBD2Q8NHP8 589 aa22.78■■□□□ 1.24
CPNE1-224ENST00000483359 PI4KAP2A4QPH2 592 aa22.77■■□□□ 1.24
CPNE1-224ENST00000483359 PI4KAP1Q8N8J0 262 aa22.77■■□□□ 1.24
CPNE1-224ENST00000483359 ADCY9O60503 1353 aa22.77■■□□□ 1.23
CPNE1-224ENST00000483359 MMP10P09238 476 aa22.76■■□□□ 1.23
CPNE1-224ENST00000483359 GPTP24298 496 aa22.76■■□□□ 1.23
CPNE1-224ENST00000483359 GIGYF2Q6Y7W6 1299 aaKnown RBP22.76■■□□□ 1.23
CPNE1-224ENST00000483359 MAP3K2Q9Y2U5 619 aa22.76■■□□□ 1.23
CPNE1-224ENST00000483359 NFIXQ14938 502 aa22.76■■□□□ 1.23
CPNE1-224ENST00000483359 F6X3S4 739 aa22.75■■□□□ 1.23
CPNE1-224ENST00000483359 NIP7Q9Y221 180 aaKnown RBP eCLIP22.75■■□□□ 1.23
CPNE1-224ENST00000483359 CLEC4GQ6UXB4 293 aa22.74■■□□□ 1.23
CPNE1-224ENST00000483359 KSR2Q6VAB6 950 aa22.74■■□□□ 1.23
CPNE1-224ENST00000483359 FRAT1Q92837 279 aaPredicted RBP22.74■■□□□ 1.23
CPNE1-224ENST00000483359 SPON1Q9HCB6 807 aa22.74■■□□□ 1.23
CPNE1-224ENST00000483359 RCAN3Q9UKA8 241 aa22.74■■□□□ 1.23
CPNE1-224ENST00000483359 NOB1Q9ULX3 412 aaKnown RBP22.74■■□□□ 1.23
CPNE1-224ENST00000483359 ANKRD36CQ5JPF3 1778 aa22.74■■□□□ 1.23
CPNE1-224ENST00000483359 FAM177BA6PVY3 158 aa22.74■■□□□ 1.23
CPNE1-224ENST00000483359 DDR1Q08345 913 aa22.73■■□□□ 1.23
CPNE1-224ENST00000483359 MYD88Q99836 296 aa22.73■■□□□ 1.23
CPNE1-224ENST00000483359 COL24A1Q17RW2 1714 aa22.73■■□□□ 1.23
CPNE1-224ENST00000483359 ATP5J2-PTCD1G3V325 749 aa22.72■■□□□ 1.23
CPNE1-224ENST00000483359 POLD1P28340 1107 aa22.72■■□□□ 1.23
CPNE1-224ENST00000483359 PTGER2P43116 358 aa22.72■■□□□ 1.23
CPNE1-224ENST00000483359 KIF16BQ96L93 1317 aa22.72■■□□□ 1.23
CPNE1-224ENST00000483359 ATP10DQ9P241 1426 aa22.72■■□□□ 1.23
CPNE1-224ENST00000483359 UBN2Q6ZU65 1347 aa22.72■■□□□ 1.23
CPNE1-224ENST00000483359 SETDB2Q96T68 719 aa22.72■■□□□ 1.23
CPNE1-224ENST00000483359 PTPRCP08575 1304 aa22.71■■□□□ 1.23
CPNE1-224ENST00000483359 CARMIL3Q8ND23 1372 aa22.71■■□□□ 1.23
CPNE1-224ENST00000483359 TM4SF1P30408 202 aa22.7■■□□□ 1.23
CPNE1-224ENST00000483359 TCIRG1Q13488 830 aa22.7■■□□□ 1.23
CPNE1-224ENST00000483359 SLC4A10Q6U841 1118 aa22.7■■□□□ 1.23
CPNE1-224ENST00000483359 DNAAF4Q8WXU2 420 aa22.7■■□□□ 1.23
CPNE1-224ENST00000483359 SGIP1Q9BQI5 828 aa22.7■■□□□ 1.23
CPNE1-224ENST00000483359 PARP3Q9Y6F1 533 aa22.7■■□□□ 1.23
CPNE1-224ENST00000483359 POLRMTO00411 1230 aaKnown RBP22.7■■□□□ 1.22
CPNE1-224ENST00000483359 HSP90AB3PQ58FF7 597 aa22.7■■□□□ 1.22
CPNE1-224ENST00000483359 METTL22Q9BUU2 404 aaPredicted RBP22.7■■□□□ 1.22
CPNE1-224ENST00000483359 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
CPNE1-224ENST00000483359 RGL2O15211 777 aa22.69■■□□□ 1.22
CPNE1-224ENST00000483359 BRPF1P55201 1214 aaPredicted RBP22.69■■□□□ 1.22
CPNE1-224ENST00000483359 NPHP1O15259 732 aa22.68■■□□□ 1.22
CPNE1-224ENST00000483359 AFDNP55196 1824 aaKnown RBP22.68■■□□□ 1.22
CPNE1-224ENST00000483359 SERPINB2P05120 415 aa22.67■■□□□ 1.22
CPNE1-224ENST00000483359 NEXNQ0ZGT2 675 aa22.67■■□□□ 1.22
CPNE1-224ENST00000483359 CWF19L2Q2TBE0 894 aaKnown RBP22.67■■□□□ 1.22
CPNE1-224ENST00000483359 KLHL34Q8N239 644 aa22.67■■□□□ 1.22
CPNE1-224ENST00000483359 CCDC24Q8N4L8 307 aa22.67■■□□□ 1.22
CPNE1-224ENST00000483359 TNNQ9UQP3 1299 aa22.67■■□□□ 1.22
CPNE1-224ENST00000483359 NBPF5PQ86XG9 351 aaPredicted RBP22.67■■□□□ 1.22
CPNE1-224ENST00000483359 SUSD4Q5VX71 490 aa22.66■■□□□ 1.22
CPNE1-224ENST00000483359 NLRP10Q86W26 655 aa22.66■■□□□ 1.22
CPNE1-224ENST00000483359 IGKV5-2P06315 115 aa22.65■■□□□ 1.22
CPNE1-224ENST00000483359 CLUAP1Q96AJ1 413 aa22.65■■□□□ 1.22
CPNE1-224ENST00000483359 ISCA1Q9BUE6 129 aa22.65■■□□□ 1.22
CPNE1-224ENST00000483359 PPP1R1BQ9UD71 204 aaPredicted RBP22.65■■□□□ 1.22
CPNE1-224ENST00000483359 TRIM27P14373 513 aa22.65■■□□□ 1.22
CPNE1-224ENST00000483359 RTL5Q5HYW3 569 aaPredicted RBP22.64■■□□□ 1.21
CPNE1-224ENST00000483359 ZKSCAN2Q63HK3 967 aa22.64■■□□□ 1.21
CPNE1-224ENST00000483359 NUTM1Q86Y26 1132 aa22.64■■□□□ 1.21
CPNE1-224ENST00000483359 CNBD1Q8NA66 436 aa22.64■■□□□ 1.21
CPNE1-224ENST00000483359 API5Q9BZZ5 524 aaKnown RBP22.64■■□□□ 1.21
CPNE1-224ENST00000483359 IPO8O15397 1037 aaKnown RBP22.63■■□□□ 1.21
CPNE1-224ENST00000483359 PLIN1O60240 522 aa22.63■■□□□ 1.21
CPNE1-224ENST00000483359 PARP10Q53GL7 1025 aa22.63■■□□□ 1.21
CPNE1-224ENST00000483359 ATF7IPQ6VMQ6 1270 aa22.63■■□□□ 1.21
CPNE1-224ENST00000483359 NRXN2Q9P2S2 1712 aa22.63■■□□□ 1.21
CPNE1-224ENST00000483359 LRP5O75197 1615 aa22.63■■□□□ 1.21
CPNE1-224ENST00000483359 GTF2E1P29083 439 aaPredicted RBP22.63■■□□□ 1.21
CPNE1-224ENST00000483359 BEND3Q5T5X7 828 aa22.63■■□□□ 1.21
CPNE1-224ENST00000483359 PRR5LQ6MZQ0 368 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms