RNA–Protein interactions for RNA: ENST00000482962.5

ARF1-210, Transcript of ADP ribosylation factor 1, humanhuman

TSL 3

Gene ARF1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF1-210ENST00000482962 NUP98P52948 1817 aa19.33■□□□□ 0.69
ARF1-210ENST00000482962 POLRMTO00411 1230 aaKnown RBP19.33■□□□□ 0.68
ARF1-210ENST00000482962 NECTIN2Q92692 538 aa19.33■□□□□ 0.68
ARF1-210ENST00000482962 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.68
ARF1-210ENST00000482962 ATP10DQ9P241 1426 aa19.33■□□□□ 0.68
ARF1-210ENST00000482962 PDIA6Q15084 440 aa19.32■□□□□ 0.68
ARF1-210ENST00000482962 CCDC30Q5VVM6 783 aa19.32■□□□□ 0.68
ARF1-210ENST00000482962 C8orf58Q8NAV2 365 aa19.32■□□□□ 0.68
ARF1-210ENST00000482962 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
ARF1-210ENST00000482962 HYPKQ9NX55 129 aa19.32■□□□□ 0.68
ARF1-210ENST00000482962 TWISTNBQ3B726 338 aaPredicted RBP19.31■□□□□ 0.68
ARF1-210ENST00000482962 TBC1D9BQ66K14 1250 aa19.31■□□□□ 0.68
ARF1-210ENST00000482962 LRP10Q7Z4F1 713 aa19.31■□□□□ 0.68
ARF1-210ENST00000482962 KIAA1551Q9HCM1 1747 aa19.31■□□□□ 0.68
ARF1-210ENST00000482962 E9PSI1 815 aa19.3■□□□□ 0.68
ARF1-210ENST00000482962 ELL2O00472 640 aaPredicted RBP19.3■□□□□ 0.68
ARF1-210ENST00000482962 PROSER3Q2NL68 480 aa19.3■□□□□ 0.68
ARF1-210ENST00000482962 BICDL1Q6ZP65 573 aa19.3■□□□□ 0.68
ARF1-210ENST00000482962 STK31Q9BXU1 1019 aa19.3■□□□□ 0.68
ARF1-210ENST00000482962 NPHP1O15259 732 aa19.29■□□□□ 0.68
ARF1-210ENST00000482962 SERPINB2P05120 415 aa19.29■□□□□ 0.68
ARF1-210ENST00000482962 TTLL7Q6ZT98 887 aa19.29■□□□□ 0.68
ARF1-210ENST00000482962 ARFGEF2Q9Y6D5 1785 aa19.29■□□□□ 0.68
ARF1-210ENST00000482962 PXDNLA1KZ92 1463 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 CACNA1FO60840 1977 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 ANXA1P04083 346 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 TGFB2P61812 414 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 HSP90AB3PQ58FF7 597 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 NLGN2Q8NFZ4 835 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 XAGE3Q8WTP9 111 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 ZBTB3Q9H5J0 574 aa19.28■□□□□ 0.68
ARF1-210ENST00000482962 NIP7Q9Y221 180 aaKnown RBP eCLIP19.28■□□□□ 0.68
ARF1-210ENST00000482962 IBTKQ9P2D0 1353 aaPredicted RBP19.28■□□□□ 0.68
ARF1-210ENST00000482962 DLEC1Q9Y238 1755 aa19.27■□□□□ 0.68
ARF1-210ENST00000482962 GIGYF2Q6Y7W6 1299 aaKnown RBP19.27■□□□□ 0.68
ARF1-210ENST00000482962 COPS6Q7L5N1 327 aa19.27■□□□□ 0.68
ARF1-210ENST00000482962 TSPYL6Q8N831 410 aa19.27■□□□□ 0.68
ARF1-210ENST00000482962 CNBD1Q8NA66 436 aa19.27■□□□□ 0.68
ARF1-210ENST00000482962 N4BP2Q86UW6 1770 aaPredicted RBP19.27■□□□□ 0.67
ARF1-210ENST00000482962 ST5P78524 1137 aa19.26■□□□□ 0.67
ARF1-210ENST00000482962 EXOSC9Q06265 439 aaKnown RBP19.26■□□□□ 0.67
ARF1-210ENST00000482962 NBPF5PQ86XG9 351 aaPredicted RBP19.26■□□□□ 0.67
ARF1-210ENST00000482962 BRCA1P38398 1863 aaKnown RBP19.25■□□□□ 0.67
ARF1-210ENST00000482962 AIMP1Q12904 312 aaKnown RBP19.25■□□□□ 0.67
ARF1-210ENST00000482962 HLFQ16534 295 aa19.25■□□□□ 0.67
ARF1-210ENST00000482962 PLBD2Q8NHP8 589 aa19.25■□□□□ 0.67
ARF1-210ENST00000482962 NYXQ9GZU5 481 aa19.25■□□□□ 0.67
ARF1-210ENST00000482962 SPINK5Q9NQ38 1064 aaPredicted RBP19.25■□□□□ 0.67
ARF1-210ENST00000482962 PDZRN3Q9UPQ7 1066 aa19.25■□□□□ 0.67
ARF1-210ENST00000482962 ANKRD31Q8N7Z5 1873 aa19.24■□□□□ 0.67
ARF1-210ENST00000482962 DDX58O95786 925 aaKnown RBP19.24■□□□□ 0.67
ARF1-210ENST00000482962 PARP10Q53GL7 1025 aa19.24■□□□□ 0.67
ARF1-210ENST00000482962 PRR5LQ6MZQ0 368 aa19.23■□□□□ 0.67
ARF1-210ENST00000482962 TPTE2Q6XPS3 522 aa19.23■□□□□ 0.67
ARF1-210ENST00000482962 RNF123Q5XPI4 1314 aa19.23■□□□□ 0.67
ARF1-210ENST00000482962 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.671e-6■□□□□ 8.3
ARF1-210ENST00000482962 SLFN5Q08AF3 891 aa19.22■□□□□ 0.67
ARF1-210ENST00000482962 ANKRD13DQ6ZTN6 518 aa19.22■□□□□ 0.67
ARF1-210ENST00000482962 COL11A2P13942 1736 aaPredicted RBP19.21■□□□□ 0.67
ARF1-210ENST00000482962 PDE6BP35913 854 aa19.21■□□□□ 0.67
ARF1-210ENST00000482962 GPR162Q16538 588 aa19.21■□□□□ 0.67
ARF1-210ENST00000482962 RIC1Q4ADV7 1423 aa19.21■□□□□ 0.67
ARF1-210ENST00000482962 PPP1R42Q7Z4L9 355 aa19.21■□□□□ 0.67
ARF1-210ENST00000482962 ZNF34Q8IZ26 560 aa19.21■□□□□ 0.67
ARF1-210ENST00000482962 BRIP1Q9BX63 1249 aa19.21■□□□□ 0.67
ARF1-210ENST00000482962 VAMP4O75379 141 aa19.2■□□□□ 0.66
ARF1-210ENST00000482962 GTF2E1P29083 439 aaPredicted RBP19.2■□□□□ 0.66
ARF1-210ENST00000482962 PELP1Q8IZL8 1130 aaKnown RBP19.2■□□□□ 0.66
ARF1-210ENST00000482962 ZNF428Q96B54 188 aa19.2■□□□□ 0.66
ARF1-210ENST00000482962 UBN2Q6ZU65 1347 aa19.2■□□□□ 0.66
ARF1-210ENST00000482962 ARFGEF1Q9Y6D6 1849 aa19.19■□□□□ 0.66
ARF1-210ENST00000482962 DPEP1P16444 411 aa19.19■□□□□ 0.66
ARF1-210ENST00000482962 GPTP24298 496 aa19.19■□□□□ 0.66
ARF1-210ENST00000482962 TCIRG1Q13488 830 aa19.19■□□□□ 0.66
ARF1-210ENST00000482962 RIC3Q7Z5B4 369 aa19.19■□□□□ 0.66
ARF1-210ENST00000482962 SLC4A2P04920 1241 aa19.18■□□□□ 0.66
ARF1-210ENST00000482962 PHAXQ9H814 394 aaKnown RBP19.18■□□□□ 0.66
ARF1-210ENST00000482962 A0A0G2JLW4 131 aa19.17■□□□□ 0.66
ARF1-210ENST00000482962 H0YIN7 160 aa19.17■□□□□ 0.66
ARF1-210ENST00000482962 GRIN3BO60391 1043 aa19.17■□□□□ 0.66
ARF1-210ENST00000482962 CT47B1P0C2W7 299 aaPredicted RBP19.17■□□□□ 0.66
ARF1-210ENST00000482962 PIM2Q9P1W9 311 aa19.17■□□□□ 0.66
ARF1-210ENST00000482962 TNRC6CQ9HCJ0 1690 aaKnown RBP19.17■□□□□ 0.66
ARF1-210ENST00000482962 FAM177BA6PVY3 158 aa19.16■□□□□ 0.66
ARF1-210ENST00000482962 NTSR2O95665 410 aa19.16■□□□□ 0.66
ARF1-210ENST00000482962 C2CD5Q86YS7 1000 aa19.16■□□□□ 0.66
ARF1-210ENST00000482962 TRMT2AQ8IZ69 625 aaKnown RBP19.16■□□□□ 0.66
ARF1-210ENST00000482962 UTP14AQ9BVJ6 771 aaKnown RBP19.16■□□□□ 0.66
ARF1-210ENST00000482962 ZBED9Q6R2W3 1325 aa19.16■□□□□ 0.66
ARF1-210ENST00000482962 LAMB2P55268 1798 aa19.16■□□□□ 0.66
ARF1-210ENST00000482962 TCERG1O14776 1098 aaKnown RBP19.15■□□□□ 0.66
ARF1-210ENST00000482962 CHRNA5P30532 468 aa19.15■□□□□ 0.66
ARF1-210ENST00000482962 FLIIQ13045 1269 aa19.15■□□□□ 0.66
ARF1-210ENST00000482962 SUSD4Q5VX71 490 aa19.15■□□□□ 0.66
ARF1-210ENST00000482962 NLRP10Q86W26 655 aa19.15■□□□□ 0.66
ARF1-210ENST00000482962 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
ARF1-210ENST00000482962 ABCC12Q96J65 1359 aa19.15■□□□□ 0.66
ARF1-210ENST00000482962 NEXNQ0ZGT2 675 aa19.14■□□□□ 0.65
ARF1-210ENST00000482962 FKBP5Q13451 457 aaPredicted RBP19.14■□□□□ 0.65
ARF1-210ENST00000482962 DALRD3Q5D0E6 543 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms