RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 SETDB2Q96T68 719 aa22.12■■□□□ 1.13
NELFCD-208ENST00000482747 ZBTB3Q9H5J0 574 aa22.12■■□□□ 1.13
NELFCD-208ENST00000482747 KCNA3P22001 575 aa22.11■■□□□ 1.13
NELFCD-208ENST00000482747 DUSP27Q5VZP5 1158 aa22.11■■□□□ 1.13
NELFCD-208ENST00000482747 LRP10Q7Z4F1 713 aa22.11■■□□□ 1.13
NELFCD-208ENST00000482747 YY1P25490 414 aa22.1■■□□□ 1.13
NELFCD-208ENST00000482747 CALD1Q05682 793 aaKnown RBP22.1■■□□□ 1.13
NELFCD-208ENST00000482747 AIMP1Q12904 312 aaKnown RBP22.1■■□□□ 1.13
NELFCD-208ENST00000482747 CHPF2Q9P2E5 772 aa22.1■■□□□ 1.13
NELFCD-208ENST00000482747 CCDC27Q2M243 656 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 HDGFL1Q5TGJ6 251 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 PRR5LQ6MZQ0 368 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 C8orf58Q8NAV2 365 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 NIP7Q9Y221 180 aaKnown RBP eCLIP22.09■■□□□ 1.13
NELFCD-208ENST00000482747 BCS1LQ9Y276 419 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 NRXN2Q9P2S2 1712 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 CLEC4GQ6UXB4 293 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 ZNF652Q9Y2D9 606 aa22.09■■□□□ 1.13
NELFCD-208ENST00000482747 NPHP1O15259 732 aa22.08■■□□□ 1.12
NELFCD-208ENST00000482747 KIF6Q6ZMV9 814 aa22.08■■□□□ 1.12
NELFCD-208ENST00000482747 MAP3K15Q6ZN16 1313 aa22.08■■□□□ 1.12
NELFCD-208ENST00000482747 COPS6Q7L5N1 327 aa22.07■■□□□ 1.12
NELFCD-208ENST00000482747 TSPYL6Q8N831 410 aa22.07■■□□□ 1.12
NELFCD-208ENST00000482747 ERBB4Q15303 1308 aa22.07■■□□□ 1.12
NELFCD-208ENST00000482747 GPTP24298 496 aa22.06■■□□□ 1.12
NELFCD-208ENST00000482747 XAGE3Q8WTP9 111 aa22.06■■□□□ 1.12
NELFCD-208ENST00000482747 NBPF5PQ86XG9 351 aaPredicted RBP22.06■■□□□ 1.12
NELFCD-208ENST00000482747 CNBD1Q8NA66 436 aa22.06■■□□□ 1.12
NELFCD-208ENST00000482747 GRIN3BO60391 1043 aa22.05■■□□□ 1.12
NELFCD-208ENST00000482747 ZNF428Q96B54 188 aa22.05■■□□□ 1.12
NELFCD-208ENST00000482747 DDX21Q9NR30 783 aaKnown RBP eCLIP22.05■■□□□ 1.12
NELFCD-208ENST00000482747 ERVV-1B6SEH8 477 aa22.04■■□□□ 1.12
NELFCD-208ENST00000482747 DIEXFQ68CQ4 756 aaKnown RBP22.04■■□□□ 1.12
NELFCD-208ENST00000482747 SPINK5Q9NQ38 1064 aaPredicted RBP22.04■■□□□ 1.12
NELFCD-208ENST00000482747 NUP98P52948 1817 aa22.04■■□□□ 1.12
NELFCD-208ENST00000482747 PIM2Q9P1W9 311 aa22.03■■□□□ 1.12
NELFCD-208ENST00000482747 TCERG1O14776 1098 aaKnown RBP22.03■■□□□ 1.12
NELFCD-208ENST00000482747 HOXB7P09629 217 aa22.03■■□□□ 1.12
NELFCD-208ENST00000482747 C2CD5Q86YS7 1000 aa22.03■■□□□ 1.12
NELFCD-208ENST00000482747 ANKRD31Q8N7Z5 1873 aa22.02■■□□□ 1.12
NELFCD-208ENST00000482747 UBN2Q6ZU65 1347 aa22.02■■□□□ 1.12
NELFCD-208ENST00000482747 BRCA1P38398 1863 aaKnown RBP22.02■■□□□ 1.12
NELFCD-208ENST00000482747 GIGYF2Q6Y7W6 1299 aaKnown RBP22.01■■□□□ 1.11
NELFCD-208ENST00000482747 NUTM1Q86Y26 1132 aa22.01■■□□□ 1.11
NELFCD-208ENST00000482747 BRIP1Q9BX63 1249 aa22.01■■□□□ 1.11
NELFCD-208ENST00000482747 DBF4Q9UBU7 674 aaPredicted RBP22.01■■□□□ 1.11
NELFCD-208ENST00000482747 CHD4Q14839 1912 aa22.01■■□□□ 1.11
NELFCD-208ENST00000482747 MIER1Q8N108 512 aa22■■□□□ 1.11
NELFCD-208ENST00000482747 H0YIN7 160 aa22■■□□□ 1.11
NELFCD-208ENST00000482747 ST5P78524 1137 aa22■■□□□ 1.11
NELFCD-208ENST00000482747 DALRD3Q5D0E6 543 aaKnown RBP22■■□□□ 1.11
NELFCD-208ENST00000482747 PHAXQ9H814 394 aaKnown RBP22■■□□□ 1.11
NELFCD-208ENST00000482747 FANCIQ9NVI1 1328 aa21.99■■□□□ 1.11
NELFCD-208ENST00000482747 SUSD4Q5VX71 490 aa21.99■■□□□ 1.11
NELFCD-208ENST00000482747 TPTE2Q6XPS3 522 aa21.99■■□□□ 1.11
NELFCD-208ENST00000482747 ZNF622Q969S3 477 aaKnown RBP eCLIP21.99■■□□□ 1.111e-8■□□□□ 10.9
NELFCD-208ENST00000482747 IL16Q14005 1332 aa21.98■■□□□ 1.11
NELFCD-208ENST00000482747 NCBP3Q53F19 620 aaKnown RBP21.98■■□□□ 1.11
NELFCD-208ENST00000482747 ARHGAP27Q6ZUM4 889 aa21.98■■□□□ 1.11
NELFCD-208ENST00000482747 WDR63Q8IWG1 891 aa21.98■■□□□ 1.11
NELFCD-208ENST00000482747 ZNF34Q8IZ26 560 aa21.98■■□□□ 1.11
NELFCD-208ENST00000482747 CCER2I3L3R5 266 aa21.97■■□□□ 1.11
NELFCD-208ENST00000482747 RGL2O15211 777 aa21.97■■□□□ 1.11
NELFCD-208ENST00000482747 GTF2E1P29083 439 aaPredicted RBP21.97■■□□□ 1.11
NELFCD-208ENST00000482747 PDE6BP35913 854 aa21.97■■□□□ 1.11
NELFCD-208ENST00000482747 ATP10DQ9P241 1426 aa21.97■■□□□ 1.11
NELFCD-208ENST00000482747 ERFEQ4G0M1 354 aa21.97■■□□□ 1.11
NELFCD-208ENST00000482747 ZNF219Q9P2Y4 722 aaPredicted RBP21.97■■□□□ 1.11
NELFCD-208ENST00000482747 COL11A2P13942 1736 aaPredicted RBP21.96■■□□□ 1.11
NELFCD-208ENST00000482747 TWISTNBQ3B726 338 aaPredicted RBP21.96■■□□□ 1.11
NELFCD-208ENST00000482747 HYPKQ9NX55 129 aa21.96■■□□□ 1.11
NELFCD-208ENST00000482747 ABCC12Q96J65 1359 aa21.95■■□□□ 1.1
NELFCD-208ENST00000482747 ANKRD13DQ6ZTN6 518 aa21.95■■□□□ 1.1
NELFCD-208ENST00000482747 EXOSC9Q06265 439 aaKnown RBP21.94■■□□□ 1.1
NELFCD-208ENST00000482747 TTLL6Q8N841 843 aa21.94■■□□□ 1.1
NELFCD-208ENST00000482747 SRGNP10124 158 aa21.94■■□□□ 1.1
NELFCD-208ENST00000482747 CCDC30Q5VVM6 783 aa21.94■■□□□ 1.1
NELFCD-208ENST00000482747 ATP5J2-PTCD1G3V325 749 aa21.93■■□□□ 1.1
NELFCD-208ENST00000482747 NTSR2O95665 410 aa21.93■■□□□ 1.1
NELFCD-208ENST00000482747 SYNE4Q8N205 404 aa21.93■■□□□ 1.1
NELFCD-208ENST00000482747 PLBD2Q8NHP8 589 aa21.93■■□□□ 1.1
NELFCD-208ENST00000482747 DLEC1Q9Y238 1755 aa21.93■■□□□ 1.1
NELFCD-208ENST00000482747 TCIRG1Q13488 830 aa21.92■■□□□ 1.1
NELFCD-208ENST00000482747 ZNF784Q8NCA9 323 aaPredicted RBP21.92■■□□□ 1.1
NELFCD-208ENST00000482747 ZNF521Q96K83 1311 aa21.92■■□□□ 1.1
NELFCD-208ENST00000482747 NYXQ9GZU5 481 aa21.92■■□□□ 1.1
NELFCD-208ENST00000482747 ARFGEF1Q9Y6D6 1849 aa21.91■■□□□ 1.1
NELFCD-208ENST00000482747 TNRC6CQ9HCJ0 1690 aaKnown RBP21.91■■□□□ 1.1
NELFCD-208ENST00000482747 GOLGA2Q08379 1002 aa21.91■■□□□ 1.1
NELFCD-208ENST00000482747 NLRP10Q86W26 655 aa21.91■■□□□ 1.1
NELFCD-208ENST00000482747 C21orf2O43822 256 aa21.9■■□□□ 1.1
NELFCD-208ENST00000482747 C3orf67Q6ZVT6 689 aa21.9■■□□□ 1.1
NELFCD-208ENST00000482747 G2E3Q7L622 706 aa21.9■■□□□ 1.1
NELFCD-208ENST00000482747 PPP1R42Q7Z4L9 355 aa21.89■■□□□ 1.1
NELFCD-208ENST00000482747 RIC3Q7Z5B4 369 aa21.89■■□□□ 1.1
NELFCD-208ENST00000482747 MASTLQ96GX5 879 aa21.89■■□□□ 1.1
NELFCD-208ENST00000482747 UTP14AQ9BVJ6 771 aaKnown RBP21.89■■□□□ 1.1
NELFCD-208ENST00000482747 CACNA1SQ13698 1873 aa21.89■■□□□ 1.09
NELFCD-208ENST00000482747 VAMP4O75379 141 aa21.89■■□□□ 1.09
NELFCD-208ENST00000482747 SLC4A2P04920 1241 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms