RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 C1orf53Q5VUE5 145 aa7.52□□□□□ -1.21
GTF3A-207ENST00000482655 GOLGA6L1Q8N7Z2 621 aa7.52□□□□□ -1.21
GTF3A-207ENST00000482655 CCDC97Q96F63 343 aaPredicted RBP7.52□□□□□ -1.21
GTF3A-207ENST00000482655 SCARF2Q96GP6 870 aaPredicted RBP7.52□□□□□ -1.21
GTF3A-207ENST00000482655 PHACTR1Q9C0D0 580 aa7.52□□□□□ -1.21
GTF3A-207ENST00000482655 OIP5O43482 229 aa7.51□□□□□ -1.21
GTF3A-207ENST00000482655 CD33P20138 364 aa7.51□□□□□ -1.21
GTF3A-207ENST00000482655 CTBSQ01459 385 aa7.51□□□□□ -1.21
GTF3A-207ENST00000482655 CDCA8Q53HL2 280 aa7.51□□□□□ -1.21
GTF3A-207ENST00000482655 FAM200AQ8TCP9 573 aa7.51□□□□□ -1.21
GTF3A-207ENST00000482655 ANKIB1Q9P2G1 1089 aa7.51□□□□□ -1.21
GTF3A-207ENST00000482655 C21orf2O43822 256 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 LAMC2Q13753 1193 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 HIF1AQ16665 826 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 FAM182BQ5T319 152 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 POTEAQ6S8J7 498 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 PODNQ7Z5L7 613 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 STAG2Q8N3U4 1231 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 NGLY1Q96IV0 654 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 C2orf49Q9BVC5 232 aaPredicted RBP7.5□□□□□ -1.21
GTF3A-207ENST00000482655 PRR12Q9ULL5 1215 aa7.5□□□□□ -1.21
GTF3A-207ENST00000482655 C2CD2LO14523 706 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 LGR5O75473 907 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 ARAFP10398 606 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 IGFBP4P22692 258 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 ALDH16A1Q8IZ83 802 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 GALNT6Q8NCL4 622 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 ARXQ96QS3 562 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 MARK1Q9P0L2 795 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 GGA1Q9UJY5 639 aa7.49□□□□□ -1.21
GTF3A-207ENST00000482655 NOVA2Q9UNW9 492 aaKnown RBP7.49□□□□□ -1.21
GTF3A-207ENST00000482655 ADH6P28332 368 aa7.48□□□□□ -1.21
GTF3A-207ENST00000482655 KCNMA1Q12791 1236 aa7.48□□□□□ -1.21
GTF3A-207ENST00000482655 SLCO4C1Q6ZQN7 724 aa7.48□□□□□ -1.21
GTF3A-207ENST00000482655 VTI1AQ96AJ9 217 aa7.48□□□□□ -1.21
GTF3A-207ENST00000482655 HSH2DQ96JZ2 352 aa7.48□□□□□ -1.21
GTF3A-207ENST00000482655 SERPINA10Q9UK55 444 aa7.48□□□□□ -1.21
GTF3A-207ENST00000482655 DNMT3AQ9Y6K1 912 aaPredicted RBP7.48□□□□□ -1.21
GTF3A-207ENST00000482655 NEURL1BA8MQ27 555 aa7.47□□□□□ -1.21
GTF3A-207ENST00000482655 EFSO43281 561 aa7.47□□□□□ -1.21
GTF3A-207ENST00000482655 AMPD1P23109 780 aa7.47□□□□□ -1.21
GTF3A-207ENST00000482655 EDARADDQ8WWZ3 215 aa7.47□□□□□ -1.21
GTF3A-207ENST00000482655 CEP63Q96MT8 703 aa7.47□□□□□ -1.21
GTF3A-207ENST00000482655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.46□□□□□ -1.22
GTF3A-207ENST00000482655 PHF20L1A8MW92 1017 aa7.46□□□□□ -1.22
GTF3A-207ENST00000482655 IRS1P35568 1242 aa7.46□□□□□ -1.22
GTF3A-207ENST00000482655 RTN1Q16799 776 aa7.46□□□□□ -1.22
GTF3A-207ENST00000482655 C14orf37Q86TY3 774 aa7.46□□□□□ -1.22
GTF3A-207ENST00000482655 BEND7Q8N7W2 519 aaPredicted RBP7.46□□□□□ -1.22
GTF3A-207ENST00000482655 C7orf43Q8WVR3 580 aa7.46□□□□□ -1.22
GTF3A-207ENST00000482655 SUSD3Q96L08 255 aa7.46□□□□□ -1.22
GTF3A-207ENST00000482655 RRAGCQ9HB90 399 aa7.46□□□□□ -1.22
GTF3A-207ENST00000482655 AVENQ9NQS1 362 aaPredicted RBP7.46□□□□□ -1.22
GTF3A-207ENST00000482655 ARID3CA6NKF2 412 aa7.45□□□□□ -1.22
GTF3A-207ENST00000482655 ZNF468Q5VIY5 522 aaPredicted RBP7.45□□□□□ -1.22
GTF3A-207ENST00000482655 KANK3Q6NY19 840 aa7.45□□□□□ -1.22
GTF3A-207ENST00000482655 BRD7Q9NPI1 651 aa7.45□□□□□ -1.22
GTF3A-207ENST00000482655 STRN4Q9NRL3 753 aa7.45□□□□□ -1.22
GTF3A-207ENST00000482655 SHISA8B8ZZ34 492 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 FOXO3O43524 673 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 GDF11O95390 407 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 EPXP11678 715 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 PCBP4P57723 403 aaKnown RBP7.44□□□□□ -1.22
GTF3A-207ENST00000482655 RASSF7Q02833 373 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 NEUROD1Q13562 356 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 ELOAQ14241 798 aaKnown RBP7.44□□□□□ -1.22
GTF3A-207ENST00000482655 SWI5Q1ZZU3 235 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 C1orf229Q6ZS94 237 aaPredicted RBP7.44□□□□□ -1.22
GTF3A-207ENST00000482655 TMEM151AQ8N4L1 468 aa7.44□□□□□ -1.22
GTF3A-207ENST00000482655 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.44□□□□□ -1.22
GTF3A-207ENST00000482655 ACIN1Q9UKV3 1341 aaKnown RBP7.44□□□□□ -1.22
GTF3A-207ENST00000482655 WEE1P30291 646 aa7.43□□□□□ -1.22
GTF3A-207ENST00000482655 TYRO3Q06418 890 aa7.43□□□□□ -1.22
GTF3A-207ENST00000482655 ZNF280CQ8ND82 737 aa7.43□□□□□ -1.22
GTF3A-207ENST00000482655 PBXIP1Q96AQ6 731 aa7.43□□□□□ -1.22
GTF3A-207ENST00000482655 HCN2Q9UL51 889 aa7.43□□□□□ -1.22
GTF3A-207ENST00000482655 SFSWAPQ12872 951 aaKnown RBP7.42□□□□□ -1.22
GTF3A-207ENST00000482655 BTLAQ7Z6A9 289 aa7.42□□□□□ -1.22
GTF3A-207ENST00000482655 MKL2Q9ULH7 1088 aa7.42□□□□□ -1.22
GTF3A-207ENST00000482655 ZMIZ1Q9ULJ6 1067 aa7.42□□□□□ -1.22
GTF3A-207ENST00000482655 KCNH4Q9UQ05 1017 aa7.42□□□□□ -1.22
GTF3A-207ENST00000482655 CNTNAP5Q8WYK1 1306 aa7.42□□□□□ -1.22
GTF3A-207ENST00000482655 TGFBR3LH3BV60 316 aa7.41□□□□□ -1.22
GTF3A-207ENST00000482655 PIK3R2O00459 728 aa7.41□□□□□ -1.22
GTF3A-207ENST00000482655 ATG7O95352 703 aa7.41□□□□□ -1.22
GTF3A-207ENST00000482655 SPEM2Q0P670 501 aa7.41□□□□□ -1.22
GTF3A-207ENST00000482655 SYT9Q86SS6 491 aa7.41□□□□□ -1.22
GTF3A-207ENST00000482655 STK32AQ8WU08 396 aa7.41□□□□□ -1.22
GTF3A-207ENST00000482655 PRMT3O60678 531 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 EPB42P16452 691 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 ALAS2P22557 587 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 GSK3AP49840 483 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 KCNQ4P56696 695 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 IER5Q5VY09 327 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 FCHSD1Q86WN1 690 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 BTBD6Q96KE9 485 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 PRIMPOLQ96LW4 560 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 KLF15Q9UIH9 416 aa7.4□□□□□ -1.22
GTF3A-207ENST00000482655 SIN3BO75182 1162 aa7.39□□□□□ -1.23
GTF3A-207ENST00000482655 SNRPNP63162 240 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms