RNA–Protein interactions for RNA: ENST00000482280.1

MSH5-215, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 944 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-215ENST00000482280 ADCY9O60503 1353 aa26.02■■□□□ 1.76
MSH5-215ENST00000482280 LAMB4A4D0S4 1761 aa26.02■■□□□ 1.76
MSH5-215ENST00000482280 MYL6BP14649 208 aa26.01■■□□□ 1.75
MSH5-215ENST00000482280 GTF2E1P29083 439 aaPredicted RBP26.01■■□□□ 1.75
MSH5-215ENST00000482280 C1QTNF8P60827 252 aa26.01■■□□□ 1.75
MSH5-215ENST00000482280 ERBB4Q15303 1308 aa26■■□□□ 1.75
MSH5-215ENST00000482280 TPTE2Q6XPS3 522 aa26■■□□□ 1.75
MSH5-215ENST00000482280 CCDC24Q8N4L8 307 aa26■■□□□ 1.75
MSH5-215ENST00000482280 EIF2S2P20042 333 aaKnown RBP25.99■■□□□ 1.75
MSH5-215ENST00000482280 BRCA1P38398 1863 aaKnown RBP25.99■■□□□ 1.75
MSH5-215ENST00000482280 BCORQ6W2J9 1755 aa25.98■■□□□ 1.75
MSH5-215ENST00000482280 C9orf131Q5VYM1 1079 aa25.98■■□□□ 1.75
MSH5-215ENST00000482280 ZNF316A6NFI3 1004 aaPredicted RBP25.97■■□□□ 1.75
MSH5-215ENST00000482280 ARFGEF1Q9Y6D6 1849 aa25.97■■□□□ 1.75
MSH5-215ENST00000482280 FAM177BA6PVY3 158 aa25.96■■□□□ 1.75
MSH5-215ENST00000482280 ERVV-1B6SEH8 477 aa25.96■■□□□ 1.75
MSH5-215ENST00000482280 RNF181Q9P0P0 153 aa25.96■■□□□ 1.75
MSH5-215ENST00000482280 MAP3K15Q6ZN16 1313 aa25.95■■□□□ 1.75
MSH5-215ENST00000482280 CALD1Q05682 793 aaKnown RBP25.95■■□□□ 1.74
MSH5-215ENST00000482280 CNKSR1Q969H4 720 aa25.95■■□□□ 1.74
MSH5-215ENST00000482280 NYXQ9GZU5 481 aa25.94■■□□□ 1.74
MSH5-215ENST00000482280 ANP32CO43423 234 aa25.93■■□□□ 1.74
MSH5-215ENST00000482280 HLFQ16534 295 aa25.93■■□□□ 1.74
MSH5-215ENST00000482280 MASTLQ96GX5 879 aa25.93■■□□□ 1.74
MSH5-215ENST00000482280 TRIM35Q9UPQ4 493 aa25.93■■□□□ 1.74
MSH5-215ENST00000482280 STYK1Q6J9G0 422 aa25.92■■□□□ 1.74
MSH5-215ENST00000482280 ZBTB3Q9H5J0 574 aa25.92■■□□□ 1.74
MSH5-215ENST00000482280 SENP3-EIF4A1A0A087X0R7 540 aa25.91■■□□□ 1.74
MSH5-215ENST00000482280 CHL1O00533 1208 aa25.91■■□□□ 1.74
MSH5-215ENST00000482280 ZNF219Q9P2Y4 722 aaPredicted RBP25.91■■□□□ 1.74
MSH5-215ENST00000482280 DLEC1Q9Y238 1755 aa25.9■■□□□ 1.74
MSH5-215ENST00000482280 APAF1O14727 1248 aa25.9■■□□□ 1.74
MSH5-215ENST00000482280 SOGA3Q5TF21 947 aa25.9■■□□□ 1.74
MSH5-215ENST00000482280 TTLL7Q6ZT98 887 aa25.9■■□□□ 1.74
MSH5-215ENST00000482280 NECTIN2Q92692 538 aa25.9■■□□□ 1.74
MSH5-215ENST00000482280 KDM2BQ8NHM5 1336 aa25.89■■□□□ 1.74
MSH5-215ENST00000482280 C21orf2O43822 256 aa25.89■■□□□ 1.74
MSH5-215ENST00000482280 SRGNP10124 158 aa25.89■■□□□ 1.74
MSH5-215ENST00000482280 LMNB1P20700 586 aa25.89■■□□□ 1.74
MSH5-215ENST00000482280 NPR1P16066 1061 aa25.88■■□□□ 1.73
MSH5-215ENST00000482280 RASSF7Q02833 373 aa25.88■■□□□ 1.73
MSH5-215ENST00000482280 CFAP44Q96MT7 982 aa25.88■■□□□ 1.73
MSH5-215ENST00000482280 GPTP24298 496 aa25.87■■□□□ 1.73
MSH5-215ENST00000482280 PRPF40BQ6NWY9 871 aaKnown RBP25.86■■□□□ 1.73
MSH5-215ENST00000482280 C16orf71Q8IYS4 520 aaPredicted RBP25.86■■□□□ 1.73
MSH5-215ENST00000482280 ZC3H4Q9UPT8 1303 aaKnown RBP25.86■■□□□ 1.73
MSH5-215ENST00000482280 ANKRD31Q8N7Z5 1873 aa25.85■■□□□ 1.73
MSH5-215ENST00000482280 HOXB7P09629 217 aa25.85■■□□□ 1.73
MSH5-215ENST00000482280 AIMP1Q12904 312 aaKnown RBP25.85■■□□□ 1.73
MSH5-215ENST00000482280 HDGFL1Q5TGJ6 251 aa25.85■■□□□ 1.73
MSH5-215ENST00000482280 GIGYF2Q6Y7W6 1299 aaKnown RBP25.85■■□□□ 1.73
MSH5-215ENST00000482280 PPP1R42Q7Z4L9 355 aa25.85■■□□□ 1.73
MSH5-215ENST00000482280 GNAI1P63096 354 aa25.84■■□□□ 1.73
MSH5-215ENST00000482280 HSP90AB3PQ58FF7 597 aa25.84■■□□□ 1.73
MSH5-215ENST00000482280 MRS2Q9HD23 443 aa25.84■■□□□ 1.73
MSH5-215ENST00000482280 ANXA1P04083 346 aa25.83■■□□□ 1.73
MSH5-215ENST00000482280 ALDH1B1P30837 517 aa25.83■■□□□ 1.73
MSH5-215ENST00000482280 PARP10Q53GL7 1025 aa25.83■■□□□ 1.73
MSH5-215ENST00000482280 DDX21Q9NR30 783 aaKnown RBP eCLIP25.83■■□□□ 1.73
MSH5-215ENST00000482280 COPS6Q7L5N1 327 aa25.82■■□□□ 1.72
MSH5-215ENST00000482280 NUTM1Q86Y26 1132 aa25.82■■□□□ 1.72
MSH5-215ENST00000482280 RPGRQ92834 1020 aaKnown RBP25.82■■□□□ 1.72
MSH5-215ENST00000482280 TAOK3Q9H2K8 898 aa25.82■■□□□ 1.72
MSH5-215ENST00000482280 IFT57Q9NWB7 429 aa25.82■■□□□ 1.72
MSH5-215ENST00000482280 IBTKQ9P2D0 1353 aaPredicted RBP25.82■■□□□ 1.72
MSH5-215ENST00000482280 PDIA6Q15084 440 aa25.81■■□□□ 1.72
MSH5-215ENST00000482280 KRT24Q2M2I5 525 aa25.81■■□□□ 1.72
MSH5-215ENST00000482280 PROSER3Q2NL68 480 aa25.81■■□□□ 1.72
MSH5-215ENST00000482280 XAGE3Q8WTP9 111 aa25.81■■□□□ 1.72
MSH5-215ENST00000482280 MBIPQ9NS73 344 aa25.81■■□□□ 1.72
MSH5-215ENST00000482280 DBF4Q9UBU7 674 aaPredicted RBP25.81■■□□□ 1.72
MSH5-215ENST00000482280 COL11A2P13942 1736 aaPredicted RBP25.8■■□□□ 1.72
MSH5-215ENST00000482280 KLRG2A4D1S0 409 aaPredicted RBP25.8■■□□□ 1.72
MSH5-215ENST00000482280 KIF3CO14782 793 aa25.8■■□□□ 1.72
MSH5-215ENST00000482280 ERFEQ4G0M1 354 aa25.8■■□□□ 1.72
MSH5-215ENST00000482280 ZNF34Q8IZ26 560 aa25.8■■□□□ 1.72
MSH5-215ENST00000482280 CHMP4AQ9BY43 222 aa25.8■■□□□ 1.72
MSH5-215ENST00000482280 CHPF2Q9P2E5 772 aa25.8■■□□□ 1.72
MSH5-215ENST00000482280 NFKBIEO00221 500 aa25.79■■□□□ 1.72
MSH5-215ENST00000482280 CCDC93Q567U6 631 aa25.79■■□□□ 1.72
MSH5-215ENST00000482280 SUSD4Q5VX71 490 aa25.79■■□□□ 1.72
MSH5-215ENST00000482280 DUSP27Q5VZP5 1158 aa25.79■■□□□ 1.72
MSH5-215ENST00000482280 NMRK2Q9NPI5 230 aa25.79■■□□□ 1.72
MSH5-215ENST00000482280 DPY19L2Q6NUT2 758 aa25.78■■□□□ 1.72
MSH5-215ENST00000482280 UTP14AQ9BVJ6 771 aaKnown RBP25.78■■□□□ 1.72
MSH5-215ENST00000482280 UBN2Q6ZU65 1347 aa25.78■■□□□ 1.72
MSH5-215ENST00000482280 NUP98P52948 1817 aa25.77■■□□□ 1.72
MSH5-215ENST00000482280 TOMM70O94826 608 aa25.77■■□□□ 1.72
MSH5-215ENST00000482280 HYPKQ9NX55 129 aa25.77■■□□□ 1.72
MSH5-215ENST00000482280 LRP10Q7Z4F1 713 aa25.76■■□□□ 1.71
MSH5-215ENST00000482280 TMX4Q9H1E5 349 aaPredicted RBP25.76■■□□□ 1.71
MSH5-215ENST00000482280 LTBP3Q9NS15 1303 aa25.76■■□□□ 1.71
MSH5-215ENST00000482280 ABCC12Q96J65 1359 aa25.75■■□□□ 1.71
MSH5-215ENST00000482280 CCDC184Q52MB2 194 aa25.75■■□□□ 1.71
MSH5-215ENST00000482280 RTKN2Q8IZC4 609 aa25.75■■□□□ 1.71
MSH5-215ENST00000482280 RBM17Q96I25 401 aaKnown RBP25.75■■□□□ 1.71
MSH5-215ENST00000482280 NLRP3Q96P20 1036 aa25.75■■□□□ 1.71
MSH5-215ENST00000482280 RNF123Q5XPI4 1314 aa25.74■■□□□ 1.71
MSH5-215ENST00000482280 NTSR2O95665 410 aa25.74■■□□□ 1.71
MSH5-215ENST00000482280 ZNF853P0CG23 659 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms