RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PHF14O94880 888 aa14.76□□□□□ -0.05
HPS4-212ENST00000481910 BRPF1P55201 1214 aaPredicted RBP14.76□□□□□ -0.05
HPS4-212ENST00000481910 FLIIQ13045 1269 aa14.76□□□□□ -0.05
HPS4-212ENST00000481910 XAGE3Q8WTP9 111 aa14.76□□□□□ -0.05
HPS4-212ENST00000481910 FRAT1Q92837 279 aaPredicted RBP14.76□□□□□ -0.05
HPS4-212ENST00000481910 STK32BQ9NY57 414 aa14.76□□□□□ -0.05
HPS4-212ENST00000481910 NUP188Q5SRE5 1749 aa14.76□□□□□ -0.05
HPS4-212ENST00000481910 SLC15A2Q16348 729 aa14.76□□□□□ -0.05
HPS4-212ENST00000481910 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
HPS4-212ENST00000481910 NOB1Q9ULX3 412 aaKnown RBP14.76□□□□□ -0.05
HPS4-212ENST00000481910 FKBP5Q13451 457 aaPredicted RBP14.75□□□□□ -0.05
HPS4-212ENST00000481910 AMIGO3Q86WK7 504 aa14.75□□□□□ -0.05
HPS4-212ENST00000481910 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
HPS4-212ENST00000481910 COL15A1P39059 1388 aa14.75□□□□□ -0.05
HPS4-212ENST00000481910 UBR3Q6ZT12 1888 aa14.75□□□□□ -0.05
HPS4-212ENST00000481910 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
HPS4-212ENST00000481910 DZIP3Q86Y13 1208 aaKnown RBP14.74□□□□□ -0.05
HPS4-212ENST00000481910 ARHGEF1Q92888 912 aaKnown RBP14.74□□□□□ -0.05
HPS4-212ENST00000481910 TBC1D2BQ9UPU7 963 aa14.74□□□□□ -0.05
HPS4-212ENST00000481910 A0A087WZG4 1122 aa14.74□□□□□ -0.05
HPS4-212ENST00000481910 IPO8O15397 1037 aaKnown RBP14.74□□□□□ -0.05
HPS4-212ENST00000481910 DDX58O95786 925 aaKnown RBP14.74□□□□□ -0.05
HPS4-212ENST00000481910 SSFA2P28290 1259 aa14.74□□□□□ -0.05
HPS4-212ENST00000481910 TTLL7Q6ZT98 887 aa14.74□□□□□ -0.05
HPS4-212ENST00000481910 ANKRD13DQ6ZTN6 518 aa14.74□□□□□ -0.05
HPS4-212ENST00000481910 CNKSR2Q8WXI2 1034 aa14.74□□□□□ -0.05
HPS4-212ENST00000481910 RFC4P35249 363 aa14.73□□□□□ -0.05
HPS4-212ENST00000481910 KIF6Q6ZMV9 814 aa14.73□□□□□ -0.05
HPS4-212ENST00000481910 PTPRCP08575 1304 aa14.73□□□□□ -0.05
HPS4-212ENST00000481910 FLAD1Q8NFF5 587 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 FBXO3Q9UK99 471 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 SUPT16HQ9Y5B9 1047 aaKnown RBP14.72□□□□□ -0.05
HPS4-212ENST00000481910 PI4KAP2A4QPH2 592 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 ZPR1O75312 459 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 ZKSCAN2Q63HK3 967 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 RIC3Q7Z5B4 369 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 PI4KAP1Q8N8J0 262 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 ARHGAP45Q92619 1136 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 ZBTB3Q9H5J0 574 aa14.72□□□□□ -0.05
HPS4-212ENST00000481910 PLIN1O60240 522 aa14.71□□□□□ -0.05
HPS4-212ENST00000481910 KSR2Q6VAB6 950 aa14.71□□□□□ -0.05
HPS4-212ENST00000481910 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.71□□□□□ -0.05
HPS4-212ENST00000481910 PLBD2Q8NHP8 589 aa14.71□□□□□ -0.05
HPS4-212ENST00000481910 ATF7IPQ6VMQ6 1270 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 COL23A1Q86Y22 540 aaPredicted RBP14.7□□□□□ -0.06
HPS4-212ENST00000481910 NARFQ9UHQ1 456 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 MAP3K2Q9Y2U5 619 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 MAP3K15Q6ZN16 1313 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 PNPLA7Q6ZV29 1317 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 TUBGCP6Q96RT7 1819 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 ERVV-1B6SEH8 477 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 F6X3S4 739 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 SOCS7O14512 581 aa14.7□□□□□ -0.06
HPS4-212ENST00000481910 API5Q9BZZ5 524 aaKnown RBP14.7□□□□□ -0.06
HPS4-212ENST00000481910 CAMTA2O94983 1202 aa14.69□□□□□ -0.06
HPS4-212ENST00000481910 TRIM27P14373 513 aa14.69□□□□□ -0.06
HPS4-212ENST00000481910 USPL1Q5W0Q7 1092 aa14.69□□□□□ -0.06
HPS4-212ENST00000481910 DNAAF4Q8WXU2 420 aa14.69□□□□□ -0.06
HPS4-212ENST00000481910 CLUAP1Q96AJ1 413 aa14.69□□□□□ -0.06
HPS4-212ENST00000481910 SRP68Q9UHB9 627 aaKnown RBP14.69□□□□□ -0.06
HPS4-212ENST00000481910 ADCY9O60503 1353 aa14.68□□□□□ -0.06
HPS4-212ENST00000481910 BRD2P25440 801 aaKnown RBP14.68□□□□□ -0.06
HPS4-212ENST00000481910 HLFQ16534 295 aa14.68□□□□□ -0.06
HPS4-212ENST00000481910 SLC4A10Q6U841 1118 aa14.68□□□□□ -0.06
HPS4-212ENST00000481910 USP42Q9H9J4 1324 aaKnown RBP14.68□□□□□ -0.06
HPS4-212ENST00000481910 RRP1P56182 461 aaKnown RBP14.68□□□□□ -0.06
HPS4-212ENST00000481910 GIGYF2Q6Y7W6 1299 aaKnown RBP14.68□□□□□ -0.06
HPS4-212ENST00000481910 C4AP0C0L4 1744 aa14.68□□□□□ -0.06
HPS4-212ENST00000481910 R3HDM1Q15032 1099 aaKnown RBP14.67□□□□□ -0.06
HPS4-212ENST00000481910 FTSJ3Q8IY81 847 aaKnown RBP14.67□□□□□ -0.06
HPS4-212ENST00000481910 METTL22Q9BUU2 404 aaPredicted RBP14.67□□□□□ -0.06
HPS4-212ENST00000481910 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
HPS4-212ENST00000481910 ZNF652Q9Y2D9 606 aa14.67□□□□□ -0.06
HPS4-212ENST00000481910 NEXNQ0ZGT2 675 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 CLEC4GQ6UXB4 293 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 DZIP1LQ8IYY4 767 aaKnown RBP14.66□□□□□ -0.06
HPS4-212ENST00000481910 NUP98P52948 1817 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 QSER1Q2KHR3 1735 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 ARFGEF2Q9Y6D5 1785 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 MS4A1P11836 297 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 TCIRG1Q13488 830 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 MYD88Q99836 296 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 BCL2L12Q9HB09 334 aa14.66□□□□□ -0.06
HPS4-212ENST00000481910 GYS1P13807 737 aa14.65□□□□□ -0.06
HPS4-212ENST00000481910 HSP90AB3PQ58FF7 597 aa14.65□□□□□ -0.06
HPS4-212ENST00000481910 PDGFDQ9GZP0 370 aaPredicted RBP14.65□□□□□ -0.06
HPS4-212ENST00000481910 RNF123Q5XPI4 1314 aa14.65□□□□□ -0.06
HPS4-212ENST00000481910 PSDA5PKW4 1024 aaPredicted RBP14.64□□□□□ -0.07
HPS4-212ENST00000481910 ATP5J2-PTCD1G3V325 749 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 RGL2O15211 777 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 BCORQ6W2J9 1755 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 ABCC4O15439 1325 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 RLBP1P12271 317 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 GPTP24298 496 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 BEND3Q5T5X7 828 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 BICDL1Q6ZP65 573 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 PANK1Q8TE04 598 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 SRCIN1Q9C0H9 1055 aa14.64□□□□□ -0.07
HPS4-212ENST00000481910 NIP7Q9Y221 180 aaKnown RBP eCLIP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms