RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 NFIXQ14938 502 aa22.75■■□□□ 1.23
SMIM11A-205ENST00000481710 TWISTNBQ3B726 338 aaPredicted RBP22.75■■□□□ 1.23
SMIM11A-205ENST00000481710 MYH16Q9H6N6 1097 aa22.75■■□□□ 1.23
SMIM11A-205ENST00000481710 ANKRD31Q8N7Z5 1873 aa22.75■■□□□ 1.23
SMIM11A-205ENST00000481710 TBC1D9BQ66K14 1250 aa22.74■■□□□ 1.23
SMIM11A-205ENST00000481710 KLHL34Q8N239 644 aa22.74■■□□□ 1.23
SMIM11A-205ENST00000481710 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
SMIM11A-205ENST00000481710 POLRMTO00411 1230 aaKnown RBP22.73■■□□□ 1.23
SMIM11A-205ENST00000481710 DBF4Q9UBU7 674 aaPredicted RBP22.73■■□□□ 1.23
SMIM11A-205ENST00000481710 PARP3Q9Y6F1 533 aa22.73■■□□□ 1.23
SMIM11A-205ENST00000481710 MAP3K15Q6ZN16 1313 aa22.73■■□□□ 1.23
SMIM11A-205ENST00000481710 HNRNPUQ00839 825 aaKnown RBP eCLIP22.72■■□□□ 1.23
SMIM11A-205ENST00000481710 HLFQ16534 295 aa22.72■■□□□ 1.23
SMIM11A-205ENST00000481710 KIF6Q6ZMV9 814 aa22.72■■□□□ 1.23
SMIM11A-205ENST00000481710 BICDL1Q6ZP65 573 aa22.72■■□□□ 1.23
SMIM11A-205ENST00000481710 CDCA7LQ96GN5 454 aa22.72■■□□□ 1.23
SMIM11A-205ENST00000481710 E9PSI1 815 aa22.71■■□□□ 1.23
SMIM11A-205ENST00000481710 SLFN5Q08AF3 891 aa22.71■■□□□ 1.23
SMIM11A-205ENST00000481710 XAGE3Q8WTP9 111 aa22.71■■□□□ 1.23
SMIM11A-205ENST00000481710 ZBTB3Q9H5J0 574 aa22.71■■□□□ 1.23
SMIM11A-205ENST00000481710 BRCA1P38398 1863 aaKnown RBP22.71■■□□□ 1.23
SMIM11A-205ENST00000481710 COPS6Q7L5N1 327 aa22.7■■□□□ 1.22
SMIM11A-205ENST00000481710 SYT17Q9BSW7 474 aa22.7■■□□□ 1.22
SMIM11A-205ENST00000481710 ZNF652Q9Y2D9 606 aa22.7■■□□□ 1.22
SMIM11A-205ENST00000481710 DLEC1Q9Y238 1755 aa22.69■■□□□ 1.22
SMIM11A-205ENST00000481710 CARMIL3Q8ND23 1372 aa22.69■■□□□ 1.22
SMIM11A-205ENST00000481710 TCERG1O14776 1098 aaKnown RBP22.69■■□□□ 1.22
SMIM11A-205ENST00000481710 AIMP1Q12904 312 aaKnown RBP22.69■■□□□ 1.22
SMIM11A-205ENST00000481710 CCDC30Q5VVM6 783 aa22.69■■□□□ 1.22
SMIM11A-205ENST00000481710 CLEC4GQ6UXB4 293 aa22.69■■□□□ 1.22
SMIM11A-205ENST00000481710 COL11A2P13942 1736 aaPredicted RBP22.68■■□□□ 1.22
SMIM11A-205ENST00000481710 ATP10DQ9P241 1426 aa22.68■■□□□ 1.22
SMIM11A-205ENST00000481710 ERVV-1B6SEH8 477 aa22.68■■□□□ 1.22
SMIM11A-205ENST00000481710 RGL2O15211 777 aa22.68■■□□□ 1.22
SMIM11A-205ENST00000481710 VAMP4O75379 141 aa22.68■■□□□ 1.22
SMIM11A-205ENST00000481710 NLGN2Q8NFZ4 835 aa22.68■■□□□ 1.22
SMIM11A-205ENST00000481710 PHAXQ9H814 394 aaKnown RBP22.67■■□□□ 1.22
SMIM11A-205ENST00000481710 HYPKQ9NX55 129 aa22.67■■□□□ 1.22
SMIM11A-205ENST00000481710 SERPINB2P05120 415 aa22.66■■□□□ 1.22
SMIM11A-205ENST00000481710 TRMT2AQ8IZ69 625 aaKnown RBP22.66■■□□□ 1.22
SMIM11A-205ENST00000481710 CD2APQ9Y5K6 639 aa22.66■■□□□ 1.22
SMIM11A-205ENST00000481710 GIGYF2Q6Y7W6 1299 aaKnown RBP22.65■■□□□ 1.22
SMIM11A-205ENST00000481710 SETDB2Q96T68 719 aa22.65■■□□□ 1.22
SMIM11A-205ENST00000481710 NIP7Q9Y221 180 aaKnown RBP eCLIP22.65■■□□□ 1.22
SMIM11A-205ENST00000481710 PXDNLA1KZ92 1463 aa22.65■■□□□ 1.22
SMIM11A-205ENST00000481710 TNRC6CQ9HCJ0 1690 aaKnown RBP22.65■■□□□ 1.22
SMIM11A-205ENST00000481710 STK31Q9BXU1 1019 aa22.64■■□□□ 1.21
SMIM11A-205ENST00000481710 CHMP4AQ9BY43 222 aa22.64■■□□□ 1.21
SMIM11A-205ENST00000481710 CACNA1SQ13698 1873 aa22.64■■□□□ 1.21
SMIM11A-205ENST00000481710 UBN2Q6ZU65 1347 aa22.62■■□□□ 1.21
SMIM11A-205ENST00000481710 GPTP24298 496 aa22.62■■□□□ 1.21
SMIM11A-205ENST00000481710 LAMB2P55268 1798 aa22.61■■□□□ 1.21
SMIM11A-205ENST00000481710 PRR5LQ6MZQ0 368 aa22.61■■□□□ 1.21
SMIM11A-205ENST00000481710 G2E3Q7L622 706 aa22.61■■□□□ 1.21
SMIM11A-205ENST00000481710 PLBD2Q8NHP8 589 aa22.61■■□□□ 1.21
SMIM11A-205ENST00000481710 GOLGB1Q14789 3259 aaKnown RBP22.61■■□□□ 1.21
SMIM11A-205ENST00000481710 ZBED9Q6R2W3 1325 aa22.6■■□□□ 1.21
SMIM11A-205ENST00000481710 SLC4A2P04920 1241 aa22.6■■□□□ 1.21
SMIM11A-205ENST00000481710 ANKRD13DQ6ZTN6 518 aa22.6■■□□□ 1.21
SMIM11A-205ENST00000481710 ZNF34Q8IZ26 560 aa22.6■■□□□ 1.21
SMIM11A-205ENST00000481710 CCDC24Q8N4L8 307 aa22.6■■□□□ 1.21
SMIM11A-205ENST00000481710 FAM177BA6PVY3 158 aa22.59■■□□□ 1.21
SMIM11A-205ENST00000481710 CNBD1Q8NA66 436 aa22.59■■□□□ 1.21
SMIM11A-205ENST00000481710 DDX60Q8IY21 1712 aaKnown RBP22.59■■□□□ 1.21
SMIM11A-205ENST00000481710 NBPF5PQ86XG9 351 aaPredicted RBP22.58■■□□□ 1.21
SMIM11A-205ENST00000481710 ARFGEF1Q9Y6D6 1849 aa22.58■■□□□ 1.21
SMIM11A-205ENST00000481710 ADCY9O60503 1353 aa22.57■■□□□ 1.2
SMIM11A-205ENST00000481710 IBTKQ9P2D0 1353 aaPredicted RBP22.57■■□□□ 1.2
SMIM11A-205ENST00000481710 ABCC12Q96J65 1359 aa22.56■■□□□ 1.2
SMIM11A-205ENST00000481710 TCIRG1Q13488 830 aa22.56■■□□□ 1.2
SMIM11A-205ENST00000481710 HSP90AB3PQ58FF7 597 aa22.56■■□□□ 1.2
SMIM11A-205ENST00000481710 RIC3Q7Z5B4 369 aa22.56■■□□□ 1.2
SMIM11A-205ENST00000481710 NPHP1O15259 732 aa22.55■■□□□ 1.2
SMIM11A-205ENST00000481710 TGFB2P61812 414 aa22.55■■□□□ 1.2
SMIM11A-205ENST00000481710 FLIIQ13045 1269 aa22.55■■□□□ 1.2
SMIM11A-205ENST00000481710 SUSD4Q5VX71 490 aa22.55■■□□□ 1.2
SMIM11A-205ENST00000481710 A0A0G2JLW4 131 aa22.54■■□□□ 1.2
SMIM11A-205ENST00000481710 NTSR2O95665 410 aa22.54■■□□□ 1.2
SMIM11A-205ENST00000481710 DDX58O95786 925 aaKnown RBP22.54■■□□□ 1.2
SMIM11A-205ENST00000481710 DPEP1P16444 411 aa22.54■■□□□ 1.2
SMIM11A-205ENST00000481710 ST5P78524 1137 aa22.54■■□□□ 1.2
SMIM11A-205ENST00000481710 WWC3Q9ULE0 1092 aa22.54■■□□□ 1.2
SMIM11A-205ENST00000481710 ATP5J2-PTCD1G3V325 749 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 CHRNA5P30532 468 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 PARP10Q53GL7 1025 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 TPTE2Q6XPS3 522 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 NLRP10Q86W26 655 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 NUTM1Q86Y26 1132 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 ZNF428Q96B54 188 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 ISCA1Q9BUE6 129 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 MAP3K2Q9Y2U5 619 aa22.53■■□□□ 1.2
SMIM11A-205ENST00000481710 PI4KAP2A4QPH2 592 aa22.52■■□□□ 1.2
SMIM11A-205ENST00000481710 KSR2Q6VAB6 950 aa22.52■■□□□ 1.2
SMIM11A-205ENST00000481710 PI4KAP1Q8N8J0 262 aa22.52■■□□□ 1.2
SMIM11A-205ENST00000481710 MYD88Q99836 296 aa22.52■■□□□ 1.2
SMIM11A-205ENST00000481710 NYXQ9GZU5 481 aa22.52■■□□□ 1.2
SMIM11A-205ENST00000481710 RIC1Q4ADV7 1423 aa22.51■■□□□ 1.19
SMIM11A-205ENST00000481710 KCNA3P22001 575 aa22.51■■□□□ 1.19
SMIM11A-205ENST00000481710 FKBP5Q13451 457 aaPredicted RBP22.51■■□□□ 1.19
SMIM11A-205ENST00000481710 ERFEQ4G0M1 354 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms