RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 CCDC102BQ68D86 513 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 C7orf43Q8WVR3 580 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 STRN4Q9NRL3 753 aa7.16□□□□□ -1.26
CBX3-207ENST00000481300 EML1O00423 815 aa7.15□□□□□ -1.26
CBX3-207ENST00000481300 EFSO43281 561 aa7.15□□□□□ -1.26
CBX3-207ENST00000481300 SAMD5Q5TGI4 173 aa7.15□□□□□ -1.26
CBX3-207ENST00000481300 VRTNQ9H8Y1 702 aa7.15□□□□□ -1.26
CBX3-207ENST00000481300 RRAGCQ9HB90 399 aa7.15□□□□□ -1.26
CBX3-207ENST00000481300 LOC100996750A0A140TA64 210 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 COL8A1P27658 744 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 ATP1A2P50993 1020 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 LINC00114Q6XXX2 140 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 BICDL1Q6ZP65 573 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 OGFOD1Q8N543 542 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 BTBD6Q96KE9 485 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 MKRN1Q9UHC7 482 aaKnown RBP7.14□□□□□ -1.27
CBX3-207ENST00000481300 MKL2Q9ULH7 1088 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 GJA3Q9Y6H8 435 aa7.14□□□□□ -1.27
CBX3-207ENST00000481300 DKK1O94907 266 aa7.13□□□□□ -1.27
CBX3-207ENST00000481300 AMPD1P23109 780 aa7.13□□□□□ -1.27
CBX3-207ENST00000481300 CDCA8Q53HL2 280 aa7.13□□□□□ -1.27
CBX3-207ENST00000481300 FCHSD1Q86WN1 690 aa7.13□□□□□ -1.27
CBX3-207ENST00000481300 TSPAN10Q9H1Z9 355 aaPredicted RBP7.13□□□□□ -1.27
CBX3-207ENST00000481300 ZNF232Q9UNY5 417 aa7.13□□□□□ -1.27
CBX3-207ENST00000481300 SERTM1A2A2V5 107 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 KRBA1A5PL33 1030 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 ADH6P28332 368 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 POTEAQ6S8J7 498 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 LRRC69Q6ZNQ3 347 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 SIX5Q8N196 739 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 LARGE2Q8N3Y3 721 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 SPOCK3Q9BQ16 436 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 SUV39H2Q9H5I1 410 aa7.12□□□□□ -1.27
CBX3-207ENST00000481300 AVENQ9NQS1 362 aaPredicted RBP7.12□□□□□ -1.27
CBX3-207ENST00000481300 M0R2N6 131 aa7.11□□□□□ -1.27
CBX3-207ENST00000481300 MSTNO14793 375 aa7.11□□□□□ -1.27
CBX3-207ENST00000481300 PROCP04070 461 aa7.11□□□□□ -1.27
CBX3-207ENST00000481300 DGKGP49619 791 aa7.11□□□□□ -1.27
CBX3-207ENST00000481300 PCBP4P57723 403 aaKnown RBP7.11□□□□□ -1.27
CBX3-207ENST00000481300 PSMA6P60900 246 aaKnown RBP7.11□□□□□ -1.27
CBX3-207ENST00000481300 LAMC2Q13753 1193 aa7.11□□□□□ -1.27
CBX3-207ENST00000481300 GRIN2CQ14957 1233 aa7.11□□□□□ -1.27
CBX3-207ENST00000481300 ZNF468Q5VIY5 522 aaPredicted RBP7.11□□□□□ -1.27
CBX3-207ENST00000481300 TSEN2Q8NCE0 465 aaKnown RBP7.11□□□□□ -1.27
CBX3-207ENST00000481300 ZNF594Q96JF6 807 aaPredicted RBP7.11□□□□□ -1.27
CBX3-207ENST00000481300 MARK1Q9P0L2 795 aa7.11□□□□□ -1.27
CBX3-207ENST00000481300 SFI1A8K8P3 1242 aa7.1□□□□□ -1.27
CBX3-207ENST00000481300 RASA1P20936 1047 aa7.1□□□□□ -1.27
CBX3-207ENST00000481300 HIRAP54198 1017 aaPredicted RBP7.1□□□□□ -1.27
CBX3-207ENST00000481300 LARP1Q6PKG0 1096 aaKnown RBP7.1□□□□□ -1.27
CBX3-207ENST00000481300 CHSY3Q70JA7 882 aa7.1□□□□□ -1.27
CBX3-207ENST00000481300 GPC6Q9Y625 555 aaPredicted RBP7.1□□□□□ -1.27
CBX3-207ENST00000481300 C21orf2O43822 256 aa7.09□□□□□ -1.27
CBX3-207ENST00000481300 SRPK2P78362 688 aaKnown RBP7.09□□□□□ -1.27
CBX3-207ENST00000481300 PDE4CQ08493 712 aa7.09□□□□□ -1.27
CBX3-207ENST00000481300 KANK4Q5T7N3 995 aaPredicted RBP7.09□□□□□ -1.27
CBX3-207ENST00000481300 RHPN1Q8TCX5 695 aa7.09□□□□□ -1.27
CBX3-207ENST00000481300 PRR12Q9ULL5 1215 aa7.09□□□□□ -1.27
CBX3-207ENST00000481300 HCN4Q9Y3Q4 1203 aa7.09□□□□□ -1.27
CBX3-207ENST00000481300 GNB5O14775 395 aa7.08□□□□□ -1.28
CBX3-207ENST00000481300 ATG7O95352 703 aa7.08□□□□□ -1.28
CBX3-207ENST00000481300 PDIA4P13667 645 aaKnown RBP7.08□□□□□ -1.28
CBX3-207ENST00000481300 SFSWAPQ12872 951 aaKnown RBP7.08□□□□□ -1.28
CBX3-207ENST00000481300 C1orf53Q5VUE5 145 aa7.08□□□□□ -1.28
CBX3-207ENST00000481300 RETREG2Q8NC44 543 aa7.08□□□□□ -1.28
CBX3-207ENST00000481300 MDFIQ99750 246 aa7.08□□□□□ -1.28
CBX3-207ENST00000481300 RBM19Q9Y4C8 960 aaKnown RBP7.08□□□□□ -1.28
CBX3-207ENST00000481300 FAM196BA6NMK8 535 aa7.07□□□□□ -1.28
CBX3-207ENST00000481300 ALYREFQ86V81 257 aaKnown RBP7.07□□□□□ -1.28
CBX3-207ENST00000481300 HSH2DQ96JZ2 352 aa7.07□□□□□ -1.28
CBX3-207ENST00000481300 SLC30A3Q99726 388 aa7.07□□□□□ -1.28
CBX3-207ENST00000481300 PHACTR1Q9C0D0 580 aa7.07□□□□□ -1.28
CBX3-207ENST00000481300 USP17L15C9J2P7 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L10C9JJH3 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L13C9JLJ4 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L12C9JPN9 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L11C9JVI0 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L21D6R901 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L18D6R9N7 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L22D6RA61 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L17D6RBQ6 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L19D6RCP7 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L20D6RJB6 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 USP17L24Q0WX57 530 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 SYT9Q86SS6 491 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 ZNF280CQ8ND82 737 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 NEUROD4Q9HD90 331 aa7.06□□□□□ -1.28
CBX3-207ENST00000481300 NOVA2Q9UNW9 492 aaKnown RBP7.06□□□□□ -1.28
CBX3-207ENST00000481300 PPP1R12BO60237 982 aaPredicted RBP7.05□□□□□ -1.28
CBX3-207ENST00000481300 CRTC2Q53ET0 693 aaPredicted RBP7.05□□□□□ -1.28
CBX3-207ENST00000481300 C2orf49Q9BVC5 232 aaPredicted RBP7.05□□□□□ -1.28
CBX3-207ENST00000481300 CHMP3Q9Y3E7 222 aa7.05□□□□□ -1.28
CBX3-207ENST00000481300 ELOA3CA0A087WX78 387 aaPredicted RBP7.04□□□□□ -1.28
CBX3-207ENST00000481300 ELOA3DA6NLF2 546 aaPredicted RBP7.04□□□□□ -1.28
CBX3-207ENST00000481300 PIK3R2O00459 728 aa7.04□□□□□ -1.28
CBX3-207ENST00000481300 SIN3BO75182 1162 aa7.04□□□□□ -1.28
CBX3-207ENST00000481300 SEC13P55735 322 aa7.04□□□□□ -1.28
CBX3-207ENST00000481300 TYRO3Q06418 890 aa7.04□□□□□ -1.28
CBX3-207ENST00000481300 PTK7Q13308 1070 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms