RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 SOWAHBA6NEL2 793 aa10.59□□□□□ -0.71
LSM5-210ENST00000480956 ZBTB24O43167 697 aaPredicted RBP10.59□□□□□ -0.71
LSM5-210ENST00000480956 SLC10A3P09131 477 aa10.59□□□□□ -0.71
LSM5-210ENST00000480956 PTPN12Q05209 780 aaKnown RBP10.59□□□□□ -0.71
LSM5-210ENST00000480956 THSD4Q6ZMP0 1018 aa10.59□□□□□ -0.71
LSM5-210ENST00000480956 FAM129BQ96TA1 746 aa10.59□□□□□ -0.71
LSM5-210ENST00000480956 NEUROD4Q9HD90 331 aa10.59□□□□□ -0.71
LSM5-210ENST00000480956 FANCLQ9NW38 375 aa10.59□□□□□ -0.71
LSM5-210ENST00000480956 PAK2Q13177 524 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 OXLD1Q5BKU9 147 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 RNF166Q96A37 237 aaPredicted RBP10.58□□□□□ -0.72
LSM5-210ENST00000480956 GPRASP2Q96D09 838 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 CCDC87Q9NVE4 849 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 GGT7Q9UJ14 662 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 CCDC189A1A4V9 331 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 SSBP05455 408 aaKnown RBP eCLIP10.58□□□□□ -0.72
LSM5-210ENST00000480956 FUT2Q10981 343 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 ARSHQ5FYA8 562 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 RELTQ969Z4 430 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 SCYL1Q96KG9 808 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
LSM5-210ENST00000480956 MAP9Q49MG5 647 aa10.57□□□□□ -0.72
LSM5-210ENST00000480956 KRBA2Q6ZNG9 492 aa10.57□□□□□ -0.72
LSM5-210ENST00000480956 AK5Q9Y6K8 562 aa10.57□□□□□ -0.72
LSM5-210ENST00000480956 SAFB2Q14151 953 aaKnown RBP eCLIP10.56□□□□□ -0.72
LSM5-210ENST00000480956 TRIM55Q9BYV6 548 aa10.56□□□□□ -0.72
LSM5-210ENST00000480956 HOMER2Q9NSB8 354 aa10.56□□□□□ -0.72
LSM5-210ENST00000480956 GPSM3Q9Y4H4 160 aa10.56□□□□□ -0.72
LSM5-210ENST00000480956 PLIN1O60240 522 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 EVA1CP58658 441 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 PTK2Q05397 1052 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 CBLBQ13191 982 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 ALKBH2Q6NS38 261 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 TSEN2Q8NCE0 465 aaKnown RBP10.55□□□□□ -0.72
LSM5-210ENST00000480956 APPBP2Q92624 585 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 C12orf49Q9H741 205 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 SNTG2Q9NY99 539 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 FZD6O60353 706 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 MZF1P28698 734 aaPredicted RBP10.55□□□□□ -0.72
LSM5-210ENST00000480956 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 ZNF408Q9H9D4 720 aa10.55□□□□□ -0.72
LSM5-210ENST00000480956 THRAP3Q9Y2W1 955 aaKnown RBP10.55□□□□□ -0.72
LSM5-210ENST00000480956 TNFRSF10BO14763 440 aa10.54□□□□□ -0.72
LSM5-210ENST00000480956 NR1I2O75469 434 aa10.54□□□□□ -0.72
LSM5-210ENST00000480956 EIF1AXP47813 144 aaKnown RBP10.54□□□□□ -0.72
LSM5-210ENST00000480956 GYS2P54840 703 aa10.54□□□□□ -0.72
LSM5-210ENST00000480956 SH3TC2Q8TF17 1288 aa10.54□□□□□ -0.72
LSM5-210ENST00000480956 DEPDC7Q96QD5 511 aa10.54□□□□□ -0.72
LSM5-210ENST00000480956 NIF3L1Q9GZT8 377 aa10.54□□□□□ -0.72
LSM5-210ENST00000480956 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.54□□□□□ -0.72
LSM5-210ENST00000480956 GOLGA8CPA6NN73 597 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 KIF3BO15066 747 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 VIL1P09327 827 aaKnown RBP10.53□□□□□ -0.72
LSM5-210ENST00000480956 RNF20Q5VTR2 975 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 WDR75Q8IWA0 830 aaKnown RBP10.53□□□□□ -0.72
LSM5-210ENST00000480956 WBP1LQ9NX94 342 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 NFX1Q12986 1120 aaKnown RBP10.53□□□□□ -0.72
LSM5-210ENST00000480956 IL17RAQ96F46 866 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 LRCH3Q96II8 777 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 PCDHGA11Q9Y5H2 935 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 RPS6KL1Q9Y6S9 549 aa10.53□□□□□ -0.72
LSM5-210ENST00000480956 FOXO3O43524 673 aa10.52□□□□□ -0.73
LSM5-210ENST00000480956 KIF4AO95239 1232 aa10.52□□□□□ -0.73
LSM5-210ENST00000480956 GNALP38405 381 aa10.52□□□□□ -0.73
LSM5-210ENST00000480956 FBF1Q8TES7 1133 aa10.52□□□□□ -0.73
LSM5-210ENST00000480956 CCDC85AQ96PX6 553 aaPredicted RBP10.52□□□□□ -0.73
LSM5-210ENST00000480956 SENP7Q9BQF6 1050 aa10.52□□□□□ -0.73
LSM5-210ENST00000480956 M0R2N6 131 aa10.51□□□□□ -0.73
LSM5-210ENST00000480956 HDAC1Q13547 482 aaPredicted RBP10.51□□□□□ -0.73
LSM5-210ENST00000480956 RASA3Q14644 834 aa10.51□□□□□ -0.73
LSM5-210ENST00000480956 ANKS3Q6ZW76 656 aa10.51□□□□□ -0.73
LSM5-210ENST00000480956 KIAA0907Q7Z7F0 614 aaPredicted RBP10.51□□□□□ -0.73
LSM5-210ENST00000480956 HOMER1Q86YM7 354 aa10.51□□□□□ -0.73
LSM5-210ENST00000480956 GAS2L2Q8NHY3 880 aa10.51□□□□□ -0.73
LSM5-210ENST00000480956 TSR2Q969E8 191 aaKnown RBP10.51□□□□□ -0.73
LSM5-210ENST00000480956 MPHOSPH6Q99547 160 aaKnown RBP10.51□□□□□ -0.73
LSM5-210ENST00000480956 F12P00748 615 aaPredicted RBP10.5□□□□□ -0.73
LSM5-210ENST00000480956 ATP6V1AP38606 617 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 PTPN5P54829 565 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 DHX8Q14562 1220 aaKnown RBP10.5□□□□□ -0.73
LSM5-210ENST00000480956 RASGRP4Q8TDF6 673 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 SEC16BQ96JE7 1060 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 HPS5Q9UPZ3 1129 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 LDHAP00338 332 aaKnown RBP10.5□□□□□ -0.73
LSM5-210ENST00000480956 HCLS1P14317 486 aaPredicted RBP10.5□□□□□ -0.73
LSM5-210ENST00000480956 EIF4BP23588 611 aaKnown RBP10.5□□□□□ -0.73
LSM5-210ENST00000480956 MASP1P48740 699 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 WDR78Q5VTH9 848 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 QTRT2Q9H974 415 aaKnown RBP10.5□□□□□ -0.73
LSM5-210ENST00000480956 MAP10Q9P2G4 905 aa10.5□□□□□ -0.73
LSM5-210ENST00000480956 CAND2O75155 1236 aa10.49□□□□□ -0.73
LSM5-210ENST00000480956 IGFBP4P22692 258 aa10.49□□□□□ -0.73
LSM5-210ENST00000480956 EXOSC10Q01780 885 aaKnown RBP10.49□□□□□ -0.73
LSM5-210ENST00000480956 RAB33AQ14088 237 aa10.49□□□□□ -0.73
LSM5-210ENST00000480956 PDXDC2PQ6P474 469 aa10.49□□□□□ -0.73
LSM5-210ENST00000480956 APBA2Q99767 749 aa10.49□□□□□ -0.73
LSM5-210ENST00000480956 KANSL2Q9H9L4 492 aa10.49□□□□□ -0.73
LSM5-210ENST00000480956 SFMBT1Q9UHJ3 866 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms