RNA–Protein interactions for RNA: ENST00000480750.3

SRGAP3-206, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-206ENST00000480750 C2CD5Q86YS7 1000 aa11.94□□□□□ -0.5
SRGAP3-206ENST00000480750 RUNDC1Q96C34 613 aa11.94□□□□□ -0.5
SRGAP3-206ENST00000480750 GPBP1L1Q9HC44 474 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-206ENST00000480750 FAM177BA6PVY3 158 aa11.93□□□□□ -0.5
SRGAP3-206ENST00000480750 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
SRGAP3-206ENST00000480750 CNBD1Q8NA66 436 aa11.93□□□□□ -0.5
SRGAP3-206ENST00000480750 NECTIN2Q92692 538 aa11.93□□□□□ -0.5
SRGAP3-206ENST00000480750 COL11A2P13942 1736 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 ANXA1P04083 346 aa11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 MYL6BP14649 208 aa11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 EIF2S2P20042 333 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 PDE6BP35913 854 aa11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 CLEC4GQ6UXB4 293 aa11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 KIF6Q6ZMV9 814 aa11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 NBPF5PQ86XG9 351 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 TRIM35Q9UPQ4 493 aa11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 PDZRN3Q9UPQ7 1066 aa11.92□□□□□ -0.5
SRGAP3-206ENST00000480750 APAF1O14727 1248 aa11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 GTF2E1P29083 439 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 HLFQ16534 295 aa11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 PRR5LQ6MZQ0 368 aa11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 TTLL6Q8N841 843 aa11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 ZNF622Q969S3 477 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 BRIP1Q9BX63 1249 aa11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 BABAM1Q9NWV8 329 aa11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 ZNF219Q9P2Y4 722 aaPredicted RBP11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 ADCY9O60503 1353 aa11.91□□□□□ -0.5
SRGAP3-206ENST00000480750 ARFGEF2Q9Y6D5 1785 aa11.9□□□□□ -0.5
SRGAP3-206ENST00000480750 MAPK8IP2Q13387 824 aaPredicted RBP11.9□□□□□ -0.5
SRGAP3-206ENST00000480750 TTLL7Q6ZT98 887 aa11.9□□□□□ -0.5
SRGAP3-206ENST00000480750 ZNF428Q96B54 188 aa11.9□□□□□ -0.5
SRGAP3-206ENST00000480750 C1QTNF8P60827 252 aa11.89□□□□□ -0.51
SRGAP3-206ENST00000480750 PROSER3Q2NL68 480 aa11.89□□□□□ -0.51
SRGAP3-206ENST00000480750 TPTE2Q6XPS3 522 aa11.89□□□□□ -0.51
SRGAP3-206ENST00000480750 DICER1Q9UPY3 1922 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-206ENST00000480750 ANKRD36CQ5JPF3 1778 aa11.89□□□□□ -0.51
SRGAP3-206ENST00000480750 ERBB4Q15303 1308 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 SLX4Q8IY92 1834 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 RGL2O15211 777 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 ANP32CO43423 234 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 C9orf131Q5VYM1 1079 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 RNF181Q9P0P0 153 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 FER1L6Q2WGJ9 1857 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 TIAM2Q8IVF5 1701 aa11.88□□□□□ -0.51
SRGAP3-206ENST00000480750 MAP3K15Q6ZN16 1313 aa11.87□□□□□ -0.51
SRGAP3-206ENST00000480750 NYXQ9GZU5 481 aa11.87□□□□□ -0.51
SRGAP3-206ENST00000480750 ZBTB3Q9H5J0 574 aa11.87□□□□□ -0.51
SRGAP3-206ENST00000480750 SALL2Q9Y467 1007 aaPredicted RBP11.87□□□□□ -0.51
SRGAP3-206ENST00000480750 ERVV-1B6SEH8 477 aa11.86□□□□□ -0.51
SRGAP3-206ENST00000480750 GPTP24298 496 aa11.86□□□□□ -0.51
SRGAP3-206ENST00000480750 RASSF7Q02833 373 aa11.86□□□□□ -0.51
SRGAP3-206ENST00000480750 CALD1Q05682 793 aaKnown RBP11.86□□□□□ -0.51
SRGAP3-206ENST00000480750 CNKSR1Q969H4 720 aa11.86□□□□□ -0.51
SRGAP3-206ENST00000480750 MASTLQ96GX5 879 aa11.86□□□□□ -0.51
SRGAP3-206ENST00000480750 ELL2O00472 640 aaPredicted RBP11.85□□□□□ -0.51
SRGAP3-206ENST00000480750 CHL1O00533 1208 aa11.85□□□□□ -0.51
SRGAP3-206ENST00000480750 C21orf2O43822 256 aa11.85□□□□□ -0.51
SRGAP3-206ENST00000480750 AIMP1Q12904 312 aaKnown RBP11.85□□□□□ -0.51
SRGAP3-206ENST00000480750 PDIA6Q15084 440 aa11.85□□□□□ -0.51
SRGAP3-206ENST00000480750 STYK1Q6J9G0 422 aa11.85□□□□□ -0.51
SRGAP3-206ENST00000480750 MRS2Q9HD23 443 aa11.85□□□□□ -0.51
SRGAP3-206ENST00000480750 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 SRGNP10124 158 aa11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 NPR1P16066 1061 aa11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 LMNB1P20700 586 aa11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 HDGFL1Q5TGJ6 251 aa11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 C16orf71Q8IYS4 520 aaPredicted RBP11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 KDM2BQ8NHM5 1336 aa11.84□□□□□ -0.51
SRGAP3-206ENST00000480750 PRELPP51888 382 aa11.83□□□□□ -0.52
SRGAP3-206ENST00000480750 GNAI1P63096 354 aa11.83□□□□□ -0.52
SRGAP3-206ENST00000480750 SOGA3Q5TF21 947 aa11.83□□□□□ -0.52
SRGAP3-206ENST00000480750 PRPF40BQ6NWY9 871 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-206ENST00000480750 GIGYF2Q6Y7W6 1299 aaKnown RBP11.83□□□□□ -0.52
SRGAP3-206ENST00000480750 PPP1R42Q7Z4L9 355 aa11.83□□□□□ -0.52
SRGAP3-206ENST00000480750 MBIPQ9NS73 344 aa11.83□□□□□ -0.52
SRGAP3-206ENST00000480750 HSP90AB3PQ58FF7 597 aa11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 OLFM4Q6UX06 510 aa11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 COPS6Q7L5N1 327 aa11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 LRP10Q7Z4F1 713 aa11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 SLC51AQ86UW1 340 aa11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 XAGE3Q8WTP9 111 aa11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 RPGRQ92834 1020 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 DDX21Q9NR30 783 aaKnown RBP eCLIP11.82□□□□□ -0.52
SRGAP3-206ENST00000480750 TCERG1O14776 1098 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 HOXB7P09629 217 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 ALDH1B1P30837 517 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 ERFEQ4G0M1 354 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 PARP10Q53GL7 1025 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 SUSD4Q5VX71 490 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 DUSP27Q5VZP5 1158 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 TAOK3Q9H2K8 898 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 IFT57Q9NWB7 429 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 CHPF2Q9P2E5 772 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 LAMB2P55268 1798 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 UBN2Q6ZU65 1347 aa11.81□□□□□ -0.52
SRGAP3-206ENST00000480750 ZC3H4Q9UPT8 1303 aaKnown RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms