RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 MYH14Q7Z406 1995 aaKnown RBP13.25□□□□□ -0.29
LINC00173-203ENST00000480237 LY75O60449 1722 aa13.25□□□□□ -0.29
LINC00173-203ENST00000480237 EXOC5O00471 708 aa13.24□□□□□ -0.29
LINC00173-203ENST00000480237 EIF2S2P20042 333 aaKnown RBP13.24□□□□□ -0.29
LINC00173-203ENST00000480237 AAMPQ13685 434 aa13.24□□□□□ -0.29
LINC00173-203ENST00000480237 DDB1Q16531 1140 aa13.24□□□□□ -0.29
LINC00173-203ENST00000480237 RREB1Q92766 1687 aa13.23□□□□□ -0.29
LINC00173-203ENST00000480237 VPS72Q15906 364 aa13.23□□□□□ -0.29
LINC00173-203ENST00000480237 BARGINQ6ZT62 677 aa13.23□□□□□ -0.29
LINC00173-203ENST00000480237 TMOD3Q9NYL9 352 aa13.23□□□□□ -0.29
LINC00173-203ENST00000480237 USP21Q9UK80 565 aa13.23□□□□□ -0.29
LINC00173-203ENST00000480237 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
LINC00173-203ENST00000480237 FNBP4Q8N3X1 1017 aaPredicted RBP13.22□□□□□ -0.29
LINC00173-203ENST00000480237 EFCAB3Q8N7B9 438 aa13.22□□□□□ -0.29
LINC00173-203ENST00000480237 FMNL2Q96PY5 1086 aa13.22□□□□□ -0.29
LINC00173-203ENST00000480237 AFF2P51816 1311 aa13.21□□□□□ -0.29
LINC00173-203ENST00000480237 FLIIQ13045 1269 aa13.21□□□□□ -0.29
LINC00173-203ENST00000480237 FKBP5Q13451 457 aaPredicted RBP13.21□□□□□ -0.29
LINC00173-203ENST00000480237 G2E3Q7L622 706 aa13.21□□□□□ -0.29
LINC00173-203ENST00000480237 CHMP4BQ9H444 224 aaKnown RBP13.21□□□□□ -0.29
LINC00173-203ENST00000480237 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
LINC00173-203ENST00000480237 BCORQ6W2J9 1755 aa13.21□□□□□ -0.3
LINC00173-203ENST00000480237 MKRN3Q13064 507 aaKnown RBP13.2□□□□□ -0.3
LINC00173-203ENST00000480237 ZNF496Q96IT1 587 aaPredicted RBP13.2□□□□□ -0.3
LINC00173-203ENST00000480237 BCL9O00512 1426 aa13.2□□□□□ -0.3
LINC00173-203ENST00000480237 ATRNO75882 1429 aa13.2□□□□□ -0.3
LINC00173-203ENST00000480237 A0A0G2JS52 829 aa13.2□□□□□ -0.3
LINC00173-203ENST00000480237 MYT1Q01538 1121 aa13.2□□□□□ -0.3
LINC00173-203ENST00000480237 FAM98CQ17RN3 349 aaKnown RBP13.2□□□□□ -0.3
LINC00173-203ENST00000480237 PRAMEF22A3QJZ6 481 aa13.19□□□□□ -0.3
LINC00173-203ENST00000480237 SNRPA1P09661 255 aaKnown RBP13.19□□□□□ -0.3
LINC00173-203ENST00000480237 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
LINC00173-203ENST00000480237 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
LINC00173-203ENST00000480237 INTS3Q68E01 1043 aaKnown RBP13.18□□□□□ -0.3
LINC00173-203ENST00000480237 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
LINC00173-203ENST00000480237 KDM2BQ8NHM5 1336 aa13.17□□□□□ -0.3
LINC00173-203ENST00000480237 F6X3S4 739 aa13.17□□□□□ -0.3
LINC00173-203ENST00000480237 ANXA1P04083 346 aa13.17□□□□□ -0.3
LINC00173-203ENST00000480237 SYTL4Q96C24 671 aaPredicted RBP13.17□□□□□ -0.3
LINC00173-203ENST00000480237 PHAXQ9H814 394 aaKnown RBP13.17□□□□□ -0.3
LINC00173-203ENST00000480237 CCT4P50991 539 aaKnown RBP13.16□□□□□ -0.3
LINC00173-203ENST00000480237 BBXQ8WY36 941 aaPredicted RBP13.16□□□□□ -0.3
LINC00173-203ENST00000480237 DDX21Q9NR30 783 aaKnown RBP eCLIP13.16□□□□□ -0.3
LINC00173-203ENST00000480237 TUBGCP6Q96RT7 1819 aa13.16□□□□□ -0.3
LINC00173-203ENST00000480237 SPEF2Q9C093 1822 aa13.15□□□□□ -0.3
LINC00173-203ENST00000480237 MARCH10Q8NA82 808 aaPredicted RBP13.15□□□□□ -0.3
LINC00173-203ENST00000480237 PIGBQ92521 554 aa13.15□□□□□ -0.3
LINC00173-203ENST00000480237 ZBTB40Q9NUA8 1239 aa13.15□□□□□ -0.3
LINC00173-203ENST00000480237 HYPKQ9NX55 129 aa13.15□□□□□ -0.3
LINC00173-203ENST00000480237 PCDHB15Q9Y5E8 787 aa13.15□□□□□ -0.3
LINC00173-203ENST00000480237 LAMB2P55268 1798 aa13.15□□□□□ -0.3
LINC00173-203ENST00000480237 PTCD1O75127 700 aaKnown RBP13.15□□□□□ -0.3
LINC00173-203ENST00000480237 PROSER3Q2NL68 480 aa13.15□□□□□ -0.3
LINC00173-203ENST00000480237 C4AP0C0L4 1744 aa13.15□□□□□ -0.31
LINC00173-203ENST00000480237 C4BP0C0L5 1744 aa13.15□□□□□ -0.31
LINC00173-203ENST00000480237 ATP10DQ9P241 1426 aa13.14□□□□□ -0.31
LINC00173-203ENST00000480237 MYL6BP14649 208 aa13.14□□□□□ -0.31
LINC00173-203ENST00000480237 TRPC5Q9UL62 973 aaPredicted RBP13.14□□□□□ -0.31
LINC00173-203ENST00000480237 ADCY9O60503 1353 aa13.14□□□□□ -0.31
LINC00173-203ENST00000480237 ERBB4Q15303 1308 aa13.13□□□□□ -0.31
LINC00173-203ENST00000480237 SCN7AQ01118 1682 aa13.13□□□□□ -0.31
LINC00173-203ENST00000480237 ZBTB7BO15156 539 aaPredicted RBP13.13□□□□□ -0.31
LINC00173-203ENST00000480237 DDX58O95786 925 aaKnown RBP13.13□□□□□ -0.31
LINC00173-203ENST00000480237 PRIM1P49642 420 aaKnown RBP13.13□□□□□ -0.31
LINC00173-203ENST00000480237 ACSBG1Q96GR2 724 aa13.13□□□□□ -0.31
LINC00173-203ENST00000480237 GJD4Q96KN9 370 aaPredicted RBP13.13□□□□□ -0.31
LINC00173-203ENST00000480237 RWDD1Q9H446 243 aaPredicted RBP13.13□□□□□ -0.31
LINC00173-203ENST00000480237 C1orf115Q9H7X2 142 aa13.13□□□□□ -0.31
LINC00173-203ENST00000480237 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
LINC00173-203ENST00000480237 USP16Q9Y5T5 823 aa13.13□□□□□ -0.31
LINC00173-203ENST00000480237 DNAAF4Q8WXU2 420 aa13.12□□□□□ -0.31
LINC00173-203ENST00000480237 SLC39A7Q92504 469 aa13.12□□□□□ -0.31
LINC00173-203ENST00000480237 ATG3Q9NT62 314 aa13.12□□□□□ -0.31
LINC00173-203ENST00000480237 UBR3Q6ZT12 1888 aa13.12□□□□□ -0.31
LINC00173-203ENST00000480237 IGHDP01880 384 aa13.11□□□□□ -0.31
LINC00173-203ENST00000480237 AIMP1Q12904 312 aaKnown RBP13.11□□□□□ -0.31
LINC00173-203ENST00000480237 PDIA6Q15084 440 aa13.11□□□□□ -0.31
LINC00173-203ENST00000480237 PI4KAP2A4QPH2 592 aa13.11□□□□□ -0.31
LINC00173-203ENST00000480237 PIP4K2AP48426 406 aaPredicted RBP13.11□□□□□ -0.31
LINC00173-203ENST00000480237 IER5LQ5T953 404 aa13.11□□□□□ -0.31
LINC00173-203ENST00000480237 VSIG10Q8N0Z9 540 aa13.11□□□□□ -0.31
LINC00173-203ENST00000480237 PI4KAP1Q8N8J0 262 aa13.11□□□□□ -0.31
LINC00173-203ENST00000480237 MEIS3Q99687 375 aa13.11□□□□□ -0.31
LINC00173-203ENST00000480237 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.11□□□□□ -0.31
LINC00173-203ENST00000480237 TNS1Q9HBL0 1735 aaKnown RBP13.1□□□□□ -0.31
LINC00173-203ENST00000480237 KSR2Q6VAB6 950 aa13.1□□□□□ -0.31
LINC00173-203ENST00000480237 XAGE3Q8WTP9 111 aa13.1□□□□□ -0.31
LINC00173-203ENST00000480237 SRCIN1Q9C0H9 1055 aa13.1□□□□□ -0.31
LINC00173-203ENST00000480237 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
LINC00173-203ENST00000480237 MAP3K2Q9Y2U5 619 aa13.1□□□□□ -0.31
LINC00173-203ENST00000480237 C7P10643 843 aa13.09□□□□□ -0.31
LINC00173-203ENST00000480237 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
LINC00173-203ENST00000480237 TEX13AQ9BXU3 409 aaPredicted RBP13.09□□□□□ -0.31
LINC00173-203ENST00000480237 MFRPQ9BY79 579 aa13.09□□□□□ -0.31
LINC00173-203ENST00000480237 EP400Q96L91 3159 aa13.08□□□□□ -0.31
LINC00173-203ENST00000480237 PALLDQ8WX93 1383 aa13.08□□□□□ -0.31
LINC00173-203ENST00000480237 RGPD3A6NKT7 1758 aaPredicted RBP13.08□□□□□ -0.31
LINC00173-203ENST00000480237 RGPD4Q7Z3J3 1758 aa13.08□□□□□ -0.31
LINC00173-203ENST00000480237 SEC24BO95487 1268 aa13.08□□□□□ -0.32
LINC00173-203ENST00000480237 GNAI3P08754 354 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms