RNA–Protein interactions for RNA: ENST00000480023.1

C9orf78-205, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 2

Gene C9orf78, Length 2,143 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-205ENST00000480023 BBXQ8WY36 941 aaPredicted RBP16.1■□□□□ 0.17
C9orf78-205ENST00000480023 ZSWIM6Q9HCJ5 1215 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 DDX19AQ9NUU7 478 aaKnown RBP16.1■□□□□ 0.17
C9orf78-205ENST00000480023 TSPYL4Q9UJ04 414 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 LRRC37A3O60309 1634 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 CAVIN2O95810 425 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 LIG1P18858 919 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
C9orf78-205ENST00000480023 MAP3K5Q99683 1374 aa16.1■□□□□ 0.17
C9orf78-205ENST00000480023 NEO1Q92859 1461 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 POLA2Q14181 598 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 SLFNL1Q499Z3 407 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 ANO6Q4KMQ2 910 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 CREBRFQ8IUR6 639 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 TNMDQ9H2S6 317 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 NRBP1Q9UHY1 535 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 NALCNQ8IZF0 1738 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 CCDC66A2RUB6 948 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 LARP6Q9BRS8 491 aaKnown RBP16.09■□□□□ 0.17
C9orf78-205ENST00000480023 TRIM5Q9C035 493 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 IL1RAPL2Q9NP60 686 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 PDRG1Q9NUG6 133 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 NPHP3Q7Z494 1330 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 PEAK1Q9H792 1746 aa16.09■□□□□ 0.17
C9orf78-205ENST00000480023 NEMFO60524 1076 aa16.08■□□□□ 0.16
C9orf78-205ENST00000480023 RBM6P78332 1123 aaKnown RBP16.08■□□□□ 0.16
C9orf78-205ENST00000480023 NUTM1Q86Y26 1132 aa16.08■□□□□ 0.16
C9orf78-205ENST00000480023 CACTINQ8WUQ7 758 aaKnown RBP16.08■□□□□ 0.16
C9orf78-205ENST00000480023 SCAND2PQ9GZW5 306 aaPredicted RBP16.08■□□□□ 0.16
C9orf78-205ENST00000480023 USP44Q9H0E7 712 aa16.08■□□□□ 0.16
C9orf78-205ENST00000480023 CLSTN2Q9H4D0 955 aa16.08■□□□□ 0.16
C9orf78-205ENST00000480023 CCDC61Q9Y6R9 512 aa16.08■□□□□ 0.16
C9orf78-205ENST00000480023 OVOS2A0A0J9YW53 1432 aa16.08■□□□□ 0.16
C9orf78-205ENST00000480023 OVOS2Q6IE36 1432 aa16.08■□□□□ 0.16
C9orf78-205ENST00000480023 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
C9orf78-205ENST00000480023 NAA30Q147X3 362 aaPredicted RBP16.07■□□□□ 0.16
C9orf78-205ENST00000480023 CEP135Q66GS9 1140 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 NYAP1Q6ZVC0 841 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 DRC7Q8IY82 874 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 NUDT16Q96DE0 195 aaKnown RBP16.07■□□□□ 0.16
C9orf78-205ENST00000480023 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 TTC21BQ7Z4L5 1316 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 PDCP20941 246 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 TPD52L1Q16890 204 aaPredicted RBP16.07■□□□□ 0.16
C9orf78-205ENST00000480023 CCDC30Q5VVM6 783 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 SARM1Q6SZW1 724 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 RHPN1Q8TCX5 695 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 DACT1Q9NYF0 836 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 CYP46A1Q9Y6A2 500 aa16.07■□□□□ 0.16
C9orf78-205ENST00000480023 UBTFL1P0CB47 393 aaPredicted RBP16.06■□□□□ 0.16
C9orf78-205ENST00000480023 CPA1P15085 419 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 ME3Q16798 604 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 KMT5BQ4FZB7 885 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 KIF1BPQ96EK5 621 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 KCND1Q9NSA2 647 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 CLIP2Q9UDT6 1046 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 CAMK4Q16566 473 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 RUFY2Q8WXA3 655 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 JAKMIP1Q96N16 626 aaKnown RBP16.06■□□□□ 0.16
C9orf78-205ENST00000480023 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
C9orf78-205ENST00000480023 TTC41PQ6P2S7 1318 aa16.05■□□□□ 0.16
C9orf78-205ENST00000480023 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
C9orf78-205ENST00000480023 ZNF165P49910 485 aa16.05■□□□□ 0.16
C9orf78-205ENST00000480023 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
C9orf78-205ENST00000480023 CWC27Q6UX04 472 aaKnown RBP16.05■□□□□ 0.16
C9orf78-205ENST00000480023 ERO1AQ96HE7 468 aa16.05■□□□□ 0.16
C9orf78-205ENST00000480023 SPG7Q9UQ90 795 aa16.05■□□□□ 0.16
C9orf78-205ENST00000480023 KDRP35968 1356 aa16.05■□□□□ 0.16
C9orf78-205ENST00000480023 ADCK5Q3MIX3 580 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 CCDC144BQ3MJ40 725 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 CDC37L1Q7L3B6 337 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 LRRC8AQ8IWT6 810 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 CCDC144CPQ8IYA2 1237 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 CKAP2LQ8IYA6 745 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 MRFAP1L1Q96HT8 127 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 RICTORQ6R327 1708 aa16.04■□□□□ 0.16
C9orf78-205ENST00000480023 SURF6O75683 361 aaKnown RBP16.03■□□□□ 0.16
C9orf78-205ENST00000480023 SLC20A2Q08357 652 aa16.03■□□□□ 0.16
C9orf78-205ENST00000480023 NECTIN1Q15223 517 aa16.03■□□□□ 0.16
C9orf78-205ENST00000480023 MTHFSDQ2M296 383 aaKnown RBP16.03■□□□□ 0.16
C9orf78-205ENST00000480023 PPP1R42Q7Z4L9 355 aa16.03■□□□□ 0.16
C9orf78-205ENST00000480023 ZNF215Q9UL58 517 aaPredicted RBP16.03■□□□□ 0.16
C9orf78-205ENST00000480023 NRXN3Q9Y4C0 1643 aa16.03■□□□□ 0.16
C9orf78-205ENST00000480023 USP31Q70CQ4 1352 aa16.03■□□□□ 0.16
C9orf78-205ENST00000480023 A2ML1A8K2U0 1454 aa16.03■□□□□ 0.16
C9orf78-205ENST00000480023 GLRX3O76003 335 aaKnown RBP16.03■□□□□ 0.16
C9orf78-205ENST00000480023 TPCN1Q9ULQ1 816 aa16.03■□□□□ 0.16
C9orf78-205ENST00000480023 TECPR2O15040 1411 aa16.02■□□□□ 0.16
C9orf78-205ENST00000480023 MAP3K19Q56UN5 1328 aa16.02■□□□□ 0.16
C9orf78-205ENST00000480023 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
C9orf78-205ENST00000480023 GIGYF1O75420 1035 aaPredicted RBP16.02■□□□□ 0.16
C9orf78-205ENST00000480023 PTH1RQ03431 593 aa16.02■□□□□ 0.16
C9orf78-205ENST00000480023 PTPN14Q15678 1187 aa16.02■□□□□ 0.16
C9orf78-205ENST00000480023 RNF20Q5VTR2 975 aa16.02■□□□□ 0.16
C9orf78-205ENST00000480023 LEO1Q8WVC0 666 aaPredicted RBP16.02■□□□□ 0.16
C9orf78-205ENST00000480023 SIRT1Q96EB6 747 aa16.02■□□□□ 0.16
C9orf78-205ENST00000480023 SPATA32Q96LK8 384 aa16.02■□□□□ 0.16
C9orf78-205ENST00000480023 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.15
C9orf78-205ENST00000480023 ERBB3P21860 1342 aa16.02■□□□□ 0.15
C9orf78-205ENST00000480023 GOLGA6L4A6NEF3 574 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 1103.2 ms