RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 SERPINB2P05120 415 aa24.39■■□□□ 1.49
AGRN-208ENST00000479707 LRP10Q7Z4F1 713 aa24.39■■□□□ 1.49
AGRN-208ENST00000479707 ZNF652Q9Y2D9 606 aa24.39■■□□□ 1.49
AGRN-208ENST00000479707 ZNF521Q96K83 1311 aa24.38■■□□□ 1.49
AGRN-208ENST00000479707 AFDNP55196 1824 aaKnown RBP24.38■■□□□ 1.49
AGRN-208ENST00000479707 GOLGA2Q08379 1002 aa24.38■■□□□ 1.49
AGRN-208ENST00000479707 COPS6Q7L5N1 327 aa24.38■■□□□ 1.49
AGRN-208ENST00000479707 XAGE3Q8WTP9 111 aa24.38■■□□□ 1.49
AGRN-208ENST00000479707 SETDB2Q96T68 719 aa24.38■■□□□ 1.49
AGRN-208ENST00000479707 MAP3K15Q6ZN16 1313 aa24.37■■□□□ 1.49
AGRN-208ENST00000479707 TWISTNBQ3B726 338 aaPredicted RBP24.37■■□□□ 1.49
AGRN-208ENST00000479707 CLEC4GQ6UXB4 293 aa24.37■■□□□ 1.49
AGRN-208ENST00000479707 DBF4Q9UBU7 674 aaPredicted RBP24.37■■□□□ 1.49
AGRN-208ENST00000479707 NUP98P52948 1817 aa24.36■■□□□ 1.49
AGRN-208ENST00000479707 TCERG1O14776 1098 aaKnown RBP24.36■■□□□ 1.49
AGRN-208ENST00000479707 EXOSC9Q06265 439 aaKnown RBP24.36■■□□□ 1.49
AGRN-208ENST00000479707 MYH16Q9H6N6 1097 aa24.36■■□□□ 1.49
AGRN-208ENST00000479707 ERVV-1B6SEH8 477 aa24.35■■□□□ 1.49
AGRN-208ENST00000479707 PELP1Q8IZL8 1130 aaKnown RBP24.35■■□□□ 1.49
AGRN-208ENST00000479707 NIP7Q9Y221 180 aaKnown RBP eCLIP24.35■■□□□ 1.498e-14■□□□□ 9.2
AGRN-208ENST00000479707 FAM177BA6PVY3 158 aa24.34■■□□□ 1.49
AGRN-208ENST00000479707 CCDC30Q5VVM6 783 aa24.34■■□□□ 1.49
AGRN-208ENST00000479707 CCDC24Q8N4L8 307 aa24.34■■□□□ 1.49
AGRN-208ENST00000479707 WWC3Q9ULE0 1092 aa24.34■■□□□ 1.49
AGRN-208ENST00000479707 HYPKQ9NX55 129 aa24.33■■□□□ 1.49
AGRN-208ENST00000479707 C10orf71Q711Q0 1435 aa24.33■■□□□ 1.49
AGRN-208ENST00000479707 KIF13BQ9NQT8 1826 aa24.33■■□□□ 1.48
AGRN-208ENST00000479707 CARMIL3Q8ND23 1372 aa24.32■■□□□ 1.48
AGRN-208ENST00000479707 N4BP2Q86UW6 1770 aaPredicted RBP24.32■■□□□ 1.48
AGRN-208ENST00000479707 DCAF8L1A6NGE4 600 aa24.32■■□□□ 1.48
AGRN-208ENST00000479707 NPHP1O15259 732 aa24.32■■□□□ 1.48
AGRN-208ENST00000479707 PHAXQ9H814 394 aaKnown RBP24.32■■□□□ 1.48
AGRN-208ENST00000479707 A0A0G2JLW4 131 aa24.31■■□□□ 1.48
AGRN-208ENST00000479707 GPTP24298 496 aa24.31■■□□□ 1.48
AGRN-208ENST00000479707 GIGYF2Q6Y7W6 1299 aaKnown RBP24.31■■□□□ 1.48
AGRN-208ENST00000479707 CDCA7LQ96GN5 454 aa24.31■■□□□ 1.48
AGRN-208ENST00000479707 NRXN2Q9P2S2 1712 aa24.3■■□□□ 1.48
AGRN-208ENST00000479707 VAMP4O75379 141 aa24.3■■□□□ 1.48
AGRN-208ENST00000479707 GPR162Q16538 588 aa24.3■■□□□ 1.48
AGRN-208ENST00000479707 CHMP4AQ9BY43 222 aa24.3■■□□□ 1.48
AGRN-208ENST00000479707 RGL2O15211 777 aa24.29■■□□□ 1.48
AGRN-208ENST00000479707 DPEP1P16444 411 aa24.29■■□□□ 1.48
AGRN-208ENST00000479707 TGFB2P61812 414 aa24.29■■□□□ 1.48
AGRN-208ENST00000479707 PRR5LQ6MZQ0 368 aa24.29■■□□□ 1.48
AGRN-208ENST00000479707 NBPF5PQ86XG9 351 aaPredicted RBP24.29■■□□□ 1.48
AGRN-208ENST00000479707 E9PSI1 815 aa24.28■■□□□ 1.48
AGRN-208ENST00000479707 HNRNPUQ00839 825 aaKnown RBP eCLIP24.28■■□□□ 1.48
AGRN-208ENST00000479707 SLFN5Q08AF3 891 aa24.28■■□□□ 1.48
AGRN-208ENST00000479707 CNBD1Q8NA66 436 aa24.28■■□□□ 1.48
AGRN-208ENST00000479707 STK31Q9BXU1 1019 aa24.28■■□□□ 1.48
AGRN-208ENST00000479707 CHRNA5P30532 468 aa24.27■■□□□ 1.48
AGRN-208ENST00000479707 ANKRD13DQ6ZTN6 518 aa24.27■■□□□ 1.48
AGRN-208ENST00000479707 KIAA1551Q9HCM1 1747 aa24.27■■□□□ 1.48
AGRN-208ENST00000479707 PXDNLA1KZ92 1463 aa24.26■■□□□ 1.47
AGRN-208ENST00000479707 SLC4A2P04920 1241 aa24.26■■□□□ 1.47
AGRN-208ENST00000479707 ZNF34Q8IZ26 560 aa24.26■■□□□ 1.47
AGRN-208ENST00000479707 PLBD2Q8NHP8 589 aa24.26■■□□□ 1.47
AGRN-208ENST00000479707 ST5P78524 1137 aa24.25■■□□□ 1.47
AGRN-208ENST00000479707 TPTE2Q6XPS3 522 aa24.25■■□□□ 1.47
AGRN-208ENST00000479707 UBN2Q6ZU65 1347 aa24.25■■□□□ 1.47
AGRN-208ENST00000479707 ATP10DQ9P241 1426 aa24.25■■□□□ 1.47
AGRN-208ENST00000479707 GTF2E1P29083 439 aaPredicted RBP24.24■■□□□ 1.47
AGRN-208ENST00000479707 SUSD4Q5VX71 490 aa24.24■■□□□ 1.47
AGRN-208ENST00000479707 RIC3Q7Z5B4 369 aa24.24■■□□□ 1.47
AGRN-208ENST00000479707 ZNF428Q96B54 188 aa24.24■■□□□ 1.47
AGRN-208ENST00000479707 YBX3P16989 372 aaKnown RBP eCLIP24.23■■□□□ 1.475e-7■□□□□ 9.2
AGRN-208ENST00000479707 TCIRG1Q13488 830 aa24.23■■□□□ 1.47
AGRN-208ENST00000479707 G2E3Q7L622 706 aa24.23■■□□□ 1.47
AGRN-208ENST00000479707 NUTM1Q86Y26 1132 aa24.23■■□□□ 1.47
AGRN-208ENST00000479707 ANKRD31Q8N7Z5 1873 aa24.23■■□□□ 1.47
AGRN-208ENST00000479707 KCNA3P22001 575 aa24.22■■□□□ 1.47
AGRN-208ENST00000479707 HSP90AB3PQ58FF7 597 aa24.22■■□□□ 1.47
AGRN-208ENST00000479707 C2CD5Q86YS7 1000 aa24.22■■□□□ 1.47
AGRN-208ENST00000479707 BRIP1Q9BX63 1249 aa24.22■■□□□ 1.47
AGRN-208ENST00000479707 ANKRD36CQ5JPF3 1778 aa24.21■■□□□ 1.47
AGRN-208ENST00000479707 ATP5J2-PTCD1G3V325 749 aa24.2■■□□□ 1.46
AGRN-208ENST00000479707 PDE6BP35913 854 aa24.2■■□□□ 1.46
AGRN-208ENST00000479707 PARP10Q53GL7 1025 aa24.2■■□□□ 1.46
AGRN-208ENST00000479707 NYXQ9GZU5 481 aa24.2■■□□□ 1.46
AGRN-208ENST00000479707 BCS1LQ9Y276 419 aa24.2■■□□□ 1.46
AGRN-208ENST00000479707 ARFGEF2Q9Y6D5 1785 aa24.2■■□□□ 1.46
AGRN-208ENST00000479707 H0YIN7 160 aa24.19■■□□□ 1.46
AGRN-208ENST00000479707 DDX58O95786 925 aaKnown RBP24.19■■□□□ 1.46
AGRN-208ENST00000479707 ERFEQ4G0M1 354 aa24.19■■□□□ 1.46
AGRN-208ENST00000479707 PPP1R42Q7Z4L9 355 aa24.19■■□□□ 1.46
AGRN-208ENST00000479707 PIM2Q9P1W9 311 aa24.19■■□□□ 1.46
AGRN-208ENST00000479707 NLRP10Q86W26 655 aa24.18■■□□□ 1.46
AGRN-208ENST00000479707 TRMT2AQ8IZ69 625 aaKnown RBP24.18■■□□□ 1.46
AGRN-208ENST00000479707 CACNA1FO60840 1977 aa24.18■■□□□ 1.46
AGRN-208ENST00000479707 NTSR2O95665 410 aa24.17■■□□□ 1.46
AGRN-208ENST00000479707 ZNF622Q969S3 477 aaKnown RBP eCLIP24.17■■□□□ 1.46
AGRN-208ENST00000479707 MYD88Q99836 296 aa24.17■■□□□ 1.46
AGRN-208ENST00000479707 UTP14AQ9BVJ6 771 aaKnown RBP24.17■■□□□ 1.46
AGRN-208ENST00000479707 MAP3K2Q9Y2U5 619 aa24.17■■□□□ 1.46
AGRN-208ENST00000479707 BRCA1P38398 1863 aaKnown RBP24.16■■□□□ 1.46
AGRN-208ENST00000479707 PI4KAP2A4QPH2 592 aa24.16■■□□□ 1.46
AGRN-208ENST00000479707 FLIIQ13045 1269 aa24.16■■□□□ 1.46
AGRN-208ENST00000479707 PI4KAP1Q8N8J0 262 aa24.16■■□□□ 1.46
AGRN-208ENST00000479707 DALRD3Q5D0E6 543 aaKnown RBP24.15■■□□□ 1.46
AGRN-208ENST00000479707 KSR2Q6VAB6 950 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms