RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 NBPF5PQ86XG9 351 aaPredicted RBP18.88■□□□□ 0.61
ATG4B-218ENST00000479554 NMRK2Q9NPI5 230 aa18.88■□□□□ 0.61
ATG4B-218ENST00000479554 RGL2O15211 777 aa18.87■□□□□ 0.61
ATG4B-218ENST00000479554 KDM2BQ8NHM5 1336 aa18.87■□□□□ 0.61
ATG4B-218ENST00000479554 ZC3H4Q9UPT8 1303 aaKnown RBP18.86■□□□□ 0.61
ATG4B-218ENST00000479554 LMNB1P20700 586 aa18.86■□□□□ 0.61
ATG4B-218ENST00000479554 RIPK4P57078 832 aa18.86■□□□□ 0.61
ATG4B-218ENST00000479554 LMOD3Q0VAK6 560 aa18.86■□□□□ 0.61
ATG4B-218ENST00000479554 TSPYL4Q9UJ04 414 aa18.86■□□□□ 0.61
ATG4B-218ENST00000479554 NIP7Q9Y221 180 aaKnown RBP eCLIP18.86■□□□□ 0.61
ATG4B-218ENST00000479554 TOMM70O94826 608 aa18.85■□□□□ 0.61
ATG4B-218ENST00000479554 HSPA6P17066 643 aa18.85■□□□□ 0.61
ATG4B-218ENST00000479554 TIAM2Q8IVF5 1701 aa18.85■□□□□ 0.61
ATG4B-218ENST00000479554 TNRC6CQ9HCJ0 1690 aaKnown RBP18.85■□□□□ 0.61
ATG4B-218ENST00000479554 NFKBIEO00221 500 aa18.84■□□□□ 0.61
ATG4B-218ENST00000479554 C21orf2O43822 256 aa18.84■□□□□ 0.61
ATG4B-218ENST00000479554 TMPOP42166 694 aaKnown RBP18.84■□□□□ 0.61
ATG4B-218ENST00000479554 STYK1Q6J9G0 422 aa18.84■□□□□ 0.61
ATG4B-218ENST00000479554 NGEFQ8N5V2 710 aa18.84■□□□□ 0.61
ATG4B-218ENST00000479554 CNKSR1Q969H4 720 aa18.84■□□□□ 0.61
ATG4B-218ENST00000479554 ZNF219Q9P2Y4 722 aaPredicted RBP18.84■□□□□ 0.61
ATG4B-218ENST00000479554 RRP7AQ9Y3A4 280 aaKnown RBP18.84■□□□□ 0.61
ATG4B-218ENST00000479554 CACNA1SQ13698 1873 aa18.84■□□□□ 0.61
ATG4B-218ENST00000479554 ARFGEF2Q9Y6D5 1785 aa18.83■□□□□ 0.61
ATG4B-218ENST00000479554 SRGNP10124 158 aa18.83■□□□□ 0.6
ATG4B-218ENST00000479554 WDR43Q15061 677 aaKnown RBP eCLIP18.83■□□□□ 0.6
ATG4B-218ENST00000479554 HLFQ16534 295 aa18.83■□□□□ 0.6
ATG4B-218ENST00000479554 CCDC146Q8IYE0 955 aa18.83■□□□□ 0.6
ATG4B-218ENST00000479554 MASTLQ96GX5 879 aa18.83■□□□□ 0.6
ATG4B-218ENST00000479554 FAM177BA6PVY3 158 aa18.82■□□□□ 0.6
ATG4B-218ENST00000479554 MYL6BP14649 208 aa18.82■□□□□ 0.6
ATG4B-218ENST00000479554 PRELPP51888 382 aa18.82■□□□□ 0.6
ATG4B-218ENST00000479554 TPTE2Q6XPS3 522 aa18.82■□□□□ 0.6
ATG4B-218ENST00000479554 KIF6Q6ZMV9 814 aa18.82■□□□□ 0.6
ATG4B-218ENST00000479554 C16orf71Q8IYS4 520 aaPredicted RBP18.82■□□□□ 0.6
ATG4B-218ENST00000479554 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
ATG4B-218ENST00000479554 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
ATG4B-218ENST00000479554 ERVV-1B6SEH8 477 aa18.81■□□□□ 0.6
ATG4B-218ENST00000479554 PRPF40BQ6NWY9 871 aaKnown RBP18.81■□□□□ 0.6
ATG4B-218ENST00000479554 BABAM1Q9NWV8 329 aa18.81■□□□□ 0.6
ATG4B-218ENST00000479554 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
ATG4B-218ENST00000479554 SLX4Q8IY92 1834 aa18.8■□□□□ 0.6
ATG4B-218ENST00000479554 CCDC88AQ3V6T2 1871 aa18.8■□□□□ 0.6
ATG4B-218ENST00000479554 NUP98P52948 1817 aa18.79■□□□□ 0.6
ATG4B-218ENST00000479554 NPR1P16066 1061 aa18.79■□□□□ 0.6
ATG4B-218ENST00000479554 GTF2E1P29083 439 aaPredicted RBP18.79■□□□□ 0.6
ATG4B-218ENST00000479554 NEUROD2Q15784 382 aa18.79■□□□□ 0.6
ATG4B-218ENST00000479554 SOGA3Q5TF21 947 aa18.79■□□□□ 0.6
ATG4B-218ENST00000479554 TTLL7Q6ZT98 887 aa18.79■□□□□ 0.6
ATG4B-218ENST00000479554 RBM46Q8TBY0 533 aaKnown RBP18.79■□□□□ 0.6
ATG4B-218ENST00000479554 RUNDC1Q96C34 613 aa18.79■□□□□ 0.6
ATG4B-218ENST00000479554 RRAGCQ9HB90 399 aa18.79■□□□□ 0.6
ATG4B-218ENST00000479554 LTBP3Q9NS15 1303 aa18.78■□□□□ 0.6
ATG4B-218ENST00000479554 NYXQ9GZU5 481 aa18.78■□□□□ 0.6
ATG4B-218ENST00000479554 TAOK3Q9H2K8 898 aa18.78■□□□□ 0.6
ATG4B-218ENST00000479554 ZBTB3Q9H5J0 574 aa18.78■□□□□ 0.6
ATG4B-218ENST00000479554 KLRG2A4D1S0 409 aaPredicted RBP18.77■□□□□ 0.6
ATG4B-218ENST00000479554 GLTPD2A6NH11 291 aa18.77■□□□□ 0.6
ATG4B-218ENST00000479554 PRKRIP1Q9H875 184 aaPredicted RBP18.77■□□□□ 0.6
ATG4B-218ENST00000479554 EIF2S2P20042 333 aaKnown RBP18.76■□□□□ 0.59
ATG4B-218ENST00000479554 ADAMTS8Q9UP79 889 aa18.76■□□□□ 0.59
ATG4B-218ENST00000479554 ABCC12Q96J65 1359 aa18.76■□□□□ 0.59
ATG4B-218ENST00000479554 IBTKQ9P2D0 1353 aaPredicted RBP18.76■□□□□ 0.59
ATG4B-218ENST00000479554 DICER1Q9UPY3 1922 aaKnown RBP18.75■□□□□ 0.59
ATG4B-218ENST00000479554 GPTP24298 496 aa18.75■□□□□ 0.59
ATG4B-218ENST00000479554 APLP1P51693 650 aa18.75■□□□□ 0.59
ATG4B-218ENST00000479554 ERFEQ4G0M1 354 aa18.75■□□□□ 0.59
ATG4B-218ENST00000479554 CCDC93Q567U6 631 aa18.75■□□□□ 0.59
ATG4B-218ENST00000479554 UBN2Q6ZU65 1347 aa18.74■□□□□ 0.59
ATG4B-218ENST00000479554 FSTL1Q12841 308 aa18.74■□□□□ 0.59
ATG4B-218ENST00000479554 GIGYF2Q6Y7W6 1299 aaKnown RBP18.74■□□□□ 0.59
ATG4B-218ENST00000479554 NUTM1Q86Y26 1132 aa18.74■□□□□ 0.59
ATG4B-218ENST00000479554 TRIM35Q9UPQ4 493 aa18.74■□□□□ 0.59
ATG4B-218ENST00000479554 RIC1Q4ADV7 1423 aa18.74■□□□□ 0.59
ATG4B-218ENST00000479554 VEGFAP15692 232 aaPredicted RBP18.73■□□□□ 0.59
ATG4B-218ENST00000479554 PDIA6Q15084 440 aa18.73■□□□□ 0.59
ATG4B-218ENST00000479554 C7orf43Q8WVR3 580 aa18.73■□□□□ 0.59
ATG4B-218ENST00000479554 LAS1LQ9Y4W2 734 aaKnown RBP18.73■□□□□ 0.59
ATG4B-218ENST00000479554 CHL1O00533 1208 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 ANXA1P04083 346 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 ALDH1B1P30837 517 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 PROSER3Q2NL68 480 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 DPY19L2Q6NUT2 758 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 LRP10Q7Z4F1 713 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 ZNF34Q8IZ26 560 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 NECTIN2Q92692 538 aa18.72■□□□□ 0.59
ATG4B-218ENST00000479554 WDR90Q96KV7 1748 aa18.71■□□□□ 0.59
ATG4B-218ENST00000479554 CRY2Q49AN0 593 aa18.71■□□□□ 0.59
ATG4B-218ENST00000479554 SUSD4Q5VX71 490 aa18.71■□□□□ 0.59
ATG4B-218ENST00000479554 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.59
ATG4B-218ENST00000479554 NTSR2O95665 410 aa18.7■□□□□ 0.58
ATG4B-218ENST00000479554 FKBP4Q02790 459 aaKnown RBP eCLIP18.7■□□□□ 0.58
ATG4B-218ENST00000479554 PARP10Q53GL7 1025 aa18.7■□□□□ 0.58
ATG4B-218ENST00000479554 PPP1R42Q7Z4L9 355 aa18.7■□□□□ 0.58
ATG4B-218ENST00000479554 SMC1BQ8NDV3 1235 aa18.7■□□□□ 0.58
ATG4B-218ENST00000479554 RPGRQ92834 1020 aaKnown RBP18.7■□□□□ 0.58
ATG4B-218ENST00000479554 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
ATG4B-218ENST00000479554 RTKN2Q8IZC4 609 aa18.69■□□□□ 0.58
ATG4B-218ENST00000479554 ANKRD36CQ5JPF3 1778 aa18.68■□□□□ 0.58
ATG4B-218ENST00000479554 AIMP1Q12904 312 aaKnown RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms