RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 MSH6P52701 1360 aa16.89■□□□□ 0.29
COL20A1-206ENST00000479501 IPO7O95373 1038 aaKnown RBP16.88■□□□□ 0.29
COL20A1-206ENST00000479501 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
COL20A1-206ENST00000479501 SPC24Q8NBT2 197 aa16.88■□□□□ 0.29
COL20A1-206ENST00000479501 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 BABAM1Q9NWV8 329 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 MTMR7Q9Y216 660 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 IGHMBP2P38935 993 aaKnown RBP16.87■□□□□ 0.29
COL20A1-206ENST00000479501 KLHL40Q2TBA0 621 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 HSP90B2PQ58FF3 399 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 HSP90AB3PQ58FF7 597 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 SLC3A2P08195 630 aaKnown RBP16.87■□□□□ 0.29
COL20A1-206ENST00000479501 CABLES1Q8TDN4 633 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 AIDAQ96BJ3 306 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 TRIM34Q9BYJ4 488 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 GDPD2Q9HCC8 539 aa16.87■□□□□ 0.29
COL20A1-206ENST00000479501 TRMT112Q9UI30 125 aaKnown RBP16.87■□□□□ 0.29
COL20A1-206ENST00000479501 TET3O43151 1660 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 CCDC69A6NI79 296 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 HMGB1P09429 215 aaKnown RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 TDO2P48775 406 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 SCAND2PQ9GZW5 306 aaPredicted RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 LRP2BPQ9P2M1 347 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 KIF1BO60333 1816 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 OTUD7AQ8TE49 926 aaPredicted RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 TEX13AQ9BXU3 409 aaPredicted RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 PA2G4Q9UQ80 394 aaKnown RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 GOLIM4O00461 696 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 CDKL5O76039 1030 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 CWF19L2Q2TBE0 894 aaKnown RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 ZCRB1Q8TBF4 217 aaKnown RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 METP08581 1390 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 ARAP3Q8WWN8 1544 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 RNMTO43148 476 aaKnown RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 STX6O43752 255 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 GPTP24298 496 aa16.86■□□□□ 0.29
COL20A1-206ENST00000479501 RBM25P49756 843 aaKnown RBP16.86■□□□□ 0.29
COL20A1-206ENST00000479501 NOM1Q5C9Z4 860 aaKnown RBP16.85■□□□□ 0.29
COL20A1-206ENST00000479501 EXOC5O00471 708 aa16.85■□□□□ 0.29
COL20A1-206ENST00000479501 USP26Q9BXU7 913 aa16.85■□□□□ 0.29
COL20A1-206ENST00000479501 LRRIQ1Q96JM4 1722 aa16.85■□□□□ 0.29
COL20A1-206ENST00000479501 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
COL20A1-206ENST00000479501 MAP3K11Q16584 847 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 NUP133Q8WUM0 1156 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 PODXL2Q9NZ53 605 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 UNC13BO14795 1591 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 RAI14Q9P0K7 980 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 ABCF2Q9UG63 623 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 CCDC183Q5T5S1 534 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 ORAI2Q96SN7 254 aa16.84■□□□□ 0.29
COL20A1-206ENST00000479501 GJB2P29033 226 aa16.83■□□□□ 0.29
COL20A1-206ENST00000479501 PIP4K2AP48426 406 aaPredicted RBP16.83■□□□□ 0.29
COL20A1-206ENST00000479501 PDE4CQ08493 712 aa16.83■□□□□ 0.29
COL20A1-206ENST00000479501 LDHAL6AQ6ZMR3 332 aa16.83■□□□□ 0.29
COL20A1-206ENST00000479501 SMC2O95347 1197 aa16.83■□□□□ 0.28
COL20A1-206ENST00000479501 LMBR1LQ6UX01 489 aa16.83■□□□□ 0.28
COL20A1-206ENST00000479501 SNRKQ9NRH2 765 aa16.83■□□□□ 0.28
COL20A1-206ENST00000479501 EFCAB6Q5THR3 1501 aa16.83■□□□□ 0.28
COL20A1-206ENST00000479501 ANKRD18BA2A2Z9 1011 aa16.83■□□□□ 0.28
COL20A1-206ENST00000479501 CHMLP26374 656 aa16.83■□□□□ 0.28
COL20A1-206ENST00000479501 UBAC1Q9BSL1 405 aa16.83■□□□□ 0.28
COL20A1-206ENST00000479501 DDX21Q9NR30 783 aaKnown RBP eCLIP16.82■□□□□ 0.28
COL20A1-206ENST00000479501 HMG20BQ9P0W2 317 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 KIAA0232Q92628 1395 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 HECW2Q9P2P5 1572 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 BICDL1Q6ZP65 573 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 ACBD3Q9H3P7 528 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 LGR6Q9HBX8 967 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 TTC41PQ6P2S7 1318 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 HOXB7P09629 217 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 DDX46Q7L014 1031 aaKnown RBP16.82■□□□□ 0.28
COL20A1-206ENST00000479501 UBE2Q2Q8WVN8 375 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 PCMTD1Q96MG8 357 aaPredicted RBP16.82■□□□□ 0.28
COL20A1-206ENST00000479501 ABCC4O15439 1325 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 CCDC112Q8NEF3 446 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 NEK1Q96PY6 1258 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 CROCC2H7BZ55 1655 aa16.82■□□□□ 0.28
COL20A1-206ENST00000479501 ADAMTS2O95450 1211 aa16.81■□□□□ 0.28
COL20A1-206ENST00000479501 CAMK4Q16566 473 aa16.81■□□□□ 0.28
COL20A1-206ENST00000479501 CWC15Q9P013 229 aaKnown RBP16.81■□□□□ 0.28
COL20A1-206ENST00000479501 RBM8AQ9Y5S9 174 aaKnown RBP16.81■□□□□ 0.28
COL20A1-206ENST00000479501 AATKQ6ZMQ8 1374 aa16.81■□□□□ 0.28
COL20A1-206ENST00000479501 RAB3GAP1Q15042 981 aa16.81■□□□□ 0.28
COL20A1-206ENST00000479501 ZNF652Q9Y2D9 606 aa16.81■□□□□ 0.28
COL20A1-206ENST00000479501 CDC42BPBQ9Y5S2 1711 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 DCAF5Q96JK2 942 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 CLTCL1P53675 1640 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 ABCC3O15438 1527 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 ZNF213O14771 459 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 NBPF6Q5VWK0 638 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 NBPF4Q96M43 638 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 PIP4K2BP78356 416 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 PDCL3Q9H2J4 239 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 USP19O94966 1318 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 NAPBQ9H115 298 aa16.8■□□□□ 0.28
COL20A1-206ENST00000479501 MAP3K12Q12852 859 aa16.79■□□□□ 0.28
COL20A1-206ENST00000479501 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
COL20A1-206ENST00000479501 PDILTQ8N807 584 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms