RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 FBXO3Q9UK99 471 aa10.32□□□□□ -0.76
HMGCL-205ENST00000479458 ECE1P42892 770 aa10.31□□□□□ -0.76
HMGCL-205ENST00000479458 ZNF530Q6P9A1 599 aaPredicted RBP10.31□□□□□ -0.76
HMGCL-205ENST00000479458 CFAP53Q96M91 514 aa10.31□□□□□ -0.76
HMGCL-205ENST00000479458 MCOLN1Q9GZU1 580 aa10.31□□□□□ -0.76
HMGCL-205ENST00000479458 U2SURPO15042 1029 aaKnown RBP10.3□□□□□ -0.76
HMGCL-205ENST00000479458 DDNO94850 711 aaPredicted RBP10.3□□□□□ -0.76
HMGCL-205ENST00000479458 MAP2K2P36507 400 aa10.3□□□□□ -0.76
HMGCL-205ENST00000479458 LTBP1Q14766 1721 aa10.3□□□□□ -0.76
HMGCL-205ENST00000479458 H0YIN7 160 aa10.29□□□□□ -0.76
HMGCL-205ENST00000479458 HSP90AB1P08238 724 aaKnown RBP10.29□□□□□ -0.76
HMGCL-205ENST00000479458 CRKLP46109 303 aaKnown RBP10.29□□□□□ -0.76
HMGCL-205ENST00000479458 RALBP1Q15311 655 aa10.29□□□□□ -0.76
HMGCL-205ENST00000479458 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
HMGCL-205ENST00000479458 SPDYE1Q8NFV5 336 aaPredicted RBP10.29□□□□□ -0.76
HMGCL-205ENST00000479458 SRP68Q9UHB9 627 aaKnown RBP10.29□□□□□ -0.76
HMGCL-205ENST00000479458 TRPM7Q96QT4 1865 aa10.29□□□□□ -0.76
HMGCL-205ENST00000479458 ZNF316A6NFI3 1004 aaPredicted RBP10.28□□□□□ -0.76
HMGCL-205ENST00000479458 CNTROBQ8N137 903 aa10.28□□□□□ -0.76
HMGCL-205ENST00000479458 GCC1Q96CN9 775 aa10.28□□□□□ -0.76
HMGCL-205ENST00000479458 TAOK3Q9H2K8 898 aa10.28□□□□□ -0.76
HMGCL-205ENST00000479458 NUDCQ9Y266 331 aa10.28□□□□□ -0.76
HMGCL-205ENST00000479458 ARFGEF2Q9Y6D5 1785 aa10.27□□□□□ -0.77
HMGCL-205ENST00000479458 ZPR1O75312 459 aa10.27□□□□□ -0.77
HMGCL-205ENST00000479458 C1orf141Q5JVX7 400 aa10.27□□□□□ -0.77
HMGCL-205ENST00000479458 SOGA3Q5TF21 947 aa10.27□□□□□ -0.77
HMGCL-205ENST00000479458 CAPNS2Q96L46 248 aa10.27□□□□□ -0.77
HMGCL-205ENST00000479458 GPR101Q96P66 508 aaPredicted RBP10.27□□□□□ -0.77
HMGCL-205ENST00000479458 RSPH6AQ9H0K4 717 aa10.27□□□□□ -0.77
HMGCL-205ENST00000479458 TJP1Q07157 1748 aa10.27□□□□□ -0.77
HMGCL-205ENST00000479458 SCN11AQ9UI33 1791 aa10.26□□□□□ -0.77
HMGCL-205ENST00000479458 ANKRD31Q8N7Z5 1873 aa10.26□□□□□ -0.77
HMGCL-205ENST00000479458 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
HMGCL-205ENST00000479458 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
HMGCL-205ENST00000479458 NFIXQ14938 502 aa10.26□□□□□ -0.77
HMGCL-205ENST00000479458 MTHFSDQ2M296 383 aaKnown RBP10.26□□□□□ -0.77
HMGCL-205ENST00000479458 AKAP4Q5JQC9 854 aa10.26□□□□□ -0.77
HMGCL-205ENST00000479458 C2CD5Q86YS7 1000 aa10.26□□□□□ -0.77
HMGCL-205ENST00000479458 NARFQ9UHQ1 456 aa10.26□□□□□ -0.77
HMGCL-205ENST00000479458 HACL1Q9UJ83 578 aa10.26□□□□□ -0.77
HMGCL-205ENST00000479458 ABT1Q9ULW3 272 aaKnown RBP10.26□□□□□ -0.77
HMGCL-205ENST00000479458 MYBBP1AQ9BQG0 1328 aaKnown RBP10.26□□□□□ -0.77
HMGCL-205ENST00000479458 SERPINB2P05120 415 aa10.25□□□□□ -0.77
HMGCL-205ENST00000479458 PRKAR2BP31323 418 aa10.25□□□□□ -0.77
HMGCL-205ENST00000479458 INTS5Q6P9B9 1019 aaKnown RBP10.25□□□□□ -0.77
HMGCL-205ENST00000479458 HHIPL1Q96JK4 782 aa10.25□□□□□ -0.77
HMGCL-205ENST00000479458 CFAP44Q96MT7 982 aa10.25□□□□□ -0.77
HMGCL-205ENST00000479458 PRKRIP1Q9H875 184 aaPredicted RBP10.25□□□□□ -0.77
HMGCL-205ENST00000479458 DDX21Q9NR30 783 aaKnown RBP eCLIP10.25□□□□□ -0.77
HMGCL-205ENST00000479458 MRC1P22897 1456 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 PITPNM1O00562 1244 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 C21orf2O43822 256 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 EPHX2P34913 555 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 BRPF1P55201 1214 aaPredicted RBP10.24□□□□□ -0.77
HMGCL-205ENST00000479458 CABP4P57796 275 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 DGKZQ13574 1117 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 USPL1Q5W0Q7 1092 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 GAS2L2Q8NHY3 880 aa10.24□□□□□ -0.77
HMGCL-205ENST00000479458 SOS1Q07889 1333 aaPredicted RBP10.24□□□□□ -0.77
HMGCL-205ENST00000479458 SLX4Q8IY92 1834 aa10.23□□□□□ -0.77
HMGCL-205ENST00000479458 RNMTO43148 476 aaKnown RBP10.23□□□□□ -0.77
HMGCL-205ENST00000479458 PDE6BP35913 854 aa10.23□□□□□ -0.77
HMGCL-205ENST00000479458 PHACTR3Q96KR7 559 aa10.23□□□□□ -0.77
HMGCL-205ENST00000479458 BRIP1Q9BX63 1249 aa10.23□□□□□ -0.77
HMGCL-205ENST00000479458 TLL2Q9Y6L7 1015 aa10.23□□□□□ -0.77
HMGCL-205ENST00000479458 COL11A2P13942 1736 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-205ENST00000479458 EAPPQ56P03 285 aaPredicted RBP10.22□□□□□ -0.77
HMGCL-205ENST00000479458 CNKSR1Q969H4 720 aa10.22□□□□□ -0.77
HMGCL-205ENST00000479458 BCL2L12Q9HB09 334 aa10.22□□□□□ -0.77
HMGCL-205ENST00000479458 LGR6Q9HBX8 967 aa10.22□□□□□ -0.77
HMGCL-205ENST00000479458 CLEC11AQ9Y240 323 aa10.22□□□□□ -0.77
HMGCL-205ENST00000479458 CARMIL3Q8ND23 1372 aa10.22□□□□□ -0.77
HMGCL-205ENST00000479458 GNAT3A8MTJ3 354 aa10.21□□□□□ -0.77
HMGCL-205ENST00000479458 MAP1SQ66K74 1059 aaPredicted RBP10.21□□□□□ -0.77
HMGCL-205ENST00000479458 STYK1Q6J9G0 422 aa10.21□□□□□ -0.77
HMGCL-205ENST00000479458 CYP4F22Q6NT55 531 aa10.21□□□□□ -0.77
HMGCL-205ENST00000479458 NFATC2IPQ8NCF5 419 aa10.21□□□□□ -0.77
HMGCL-205ENST00000479458 SLC52A2Q9HAB3 445 aa10.21□□□□□ -0.77
HMGCL-205ENST00000479458 FZD9O00144 591 aa10.2□□□□□ -0.78
HMGCL-205ENST00000479458 COL15A1P39059 1388 aa10.2□□□□□ -0.78
HMGCL-205ENST00000479458 CST9Q5W186 159 aa10.2□□□□□ -0.78
HMGCL-205ENST00000479458 IL17REQ8NFR9 667 aa10.2□□□□□ -0.78
HMGCL-205ENST00000479458 ZNF622Q969S3 477 aaKnown RBP eCLIP10.2□□□□□ -0.78
HMGCL-205ENST00000479458 PLEKHF1Q96S99 279 aa10.2□□□□□ -0.78
HMGCL-205ENST00000479458 CEMIPQ8WUJ3 1361 aa10.19□□□□□ -0.78
HMGCL-205ENST00000479458 PTCD1O75127 700 aaKnown RBP10.19□□□□□ -0.78
HMGCL-205ENST00000479458 VASPP50552 380 aaPredicted RBP10.19□□□□□ -0.78
HMGCL-205ENST00000479458 SAPCD2Q86UD0 394 aa10.19□□□□□ -0.78
HMGCL-205ENST00000479458 GPC2Q8N158 579 aa10.19□□□□□ -0.78
HMGCL-205ENST00000479458 C7orf43Q8WVR3 580 aa10.19□□□□□ -0.78
HMGCL-205ENST00000479458 TSKSQ9UJT2 592 aa10.19□□□□□ -0.78
HMGCL-205ENST00000479458 CACNA1SQ13698 1873 aa10.19□□□□□ -0.78
HMGCL-205ENST00000479458 SIPA1L3O60292 1781 aaPredicted RBP10.19□□□□□ -0.78
HMGCL-205ENST00000479458 ZNF541Q9H0D2 1346 aa10.18□□□□□ -0.78
HMGCL-205ENST00000479458 SRGNP10124 158 aa10.18□□□□□ -0.78
HMGCL-205ENST00000479458 NBPF15Q8N660 670 aa10.18□□□□□ -0.78
HMGCL-205ENST00000479458 SAGE1Q9NXZ1 904 aa10.18□□□□□ -0.78
HMGCL-205ENST00000479458 DLG5Q8TDM6 1919 aa10.17□□□□□ -0.78
HMGCL-205ENST00000479458 NEFMP07197 916 aa10.17□□□□□ -0.78
HMGCL-205ENST00000479458 CYP19A1P11511 503 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms