RNA–Protein interactions for RNA: ENST00000479136.5

GSDMB-209, Transcript of gasdermin B, humanhuman

TSL 1 (best)

Gene GSDMB, Length 2,209 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMB-209ENST00000479136 HOXB7P09629 217 aa13.41□□□□□ -0.26
GSDMB-209ENST00000479136 SETQ01105 290 aaPredicted RBP13.41□□□□□ -0.26
GSDMB-209ENST00000479136 NKX1-1Q15270 411 aaPredicted RBP13.41□□□□□ -0.26
GSDMB-209ENST00000479136 SPATA31A5Q5VU36 1347 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 SPATA31A7Q8IWB4 1347 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 CCDC66A2RUB6 948 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 SLIT2O94813 1529 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 A0A0G2JS52 829 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 GIGYF1O75420 1035 aaPredicted RBP13.4□□□□□ -0.26
GSDMB-209ENST00000479136 FKBP5Q13451 457 aaPredicted RBP13.4□□□□□ -0.26
GSDMB-209ENST00000479136 BECN1Q14457 450 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 DDB1Q16531 1140 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
GSDMB-209ENST00000479136 SKAP1Q86WV1 359 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 USP21Q9UK80 565 aa13.4□□□□□ -0.26
GSDMB-209ENST00000479136 KDM3BQ7LBC6 1761 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 SCN11AQ9UI33 1791 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 DISP2A7MBM2 1401 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 ZNF500O60304 480 aaPredicted RBP13.39□□□□□ -0.27
GSDMB-209ENST00000479136 CCDC173Q0VFZ6 552 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 G2E3Q7L622 706 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 EGFL6Q8IUX8 553 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 FMNL2Q96PY5 1086 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 PPP1R9BQ96SB3 815 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 TMOD3Q9NYL9 352 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 ADAMTS7Q9UKP4 1686 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 TULP2O00295 520 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 MSNP26038 577 aaKnown RBP13.39□□□□□ -0.27
GSDMB-209ENST00000479136 FLIIQ13045 1269 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 SLC4A10Q6U841 1118 aa13.39□□□□□ -0.27
GSDMB-209ENST00000479136 ABCC4O15439 1325 aa13.38□□□□□ -0.27
GSDMB-209ENST00000479136 ZBTB22O15209 634 aa13.38□□□□□ -0.27
GSDMB-209ENST00000479136 ZNF496Q96IT1 587 aaPredicted RBP13.38□□□□□ -0.27
GSDMB-209ENST00000479136 CHPF2Q9P2E5 772 aa13.38□□□□□ -0.27
GSDMB-209ENST00000479136 R3HCC1Q9Y3T6 440 aaKnown RBP13.38□□□□□ -0.27
GSDMB-209ENST00000479136 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
GSDMB-209ENST00000479136 VIRMAQ69YN4 1812 aaKnown RBP13.38□□□□□ -0.27
GSDMB-209ENST00000479136 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
GSDMB-209ENST00000479136 VPS72Q15906 364 aa13.37□□□□□ -0.27
GSDMB-209ENST00000479136 SASS6Q6UVJ0 657 aa13.37□□□□□ -0.27
GSDMB-209ENST00000479136 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
GSDMB-209ENST00000479136 MRC1P22897 1456 aa13.37□□□□□ -0.27
GSDMB-209ENST00000479136 NWD2Q9ULI1 1742 aa13.37□□□□□ -0.27
GSDMB-209ENST00000479136 FAM98CQ17RN3 349 aaKnown RBP13.37□□□□□ -0.27
GSDMB-209ENST00000479136 CENPQQ7L2Z9 268 aaPredicted RBP13.37□□□□□ -0.27
GSDMB-209ENST00000479136 FNBP4Q8N3X1 1017 aaPredicted RBP13.37□□□□□ -0.27
GSDMB-209ENST00000479136 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
GSDMB-209ENST00000479136 LRP6O75581 1613 aa13.37□□□□□ -0.27
GSDMB-209ENST00000479136 F6X3S4 739 aa13.36□□□□□ -0.27
GSDMB-209ENST00000479136 SNRPA1P09661 255 aaKnown RBP13.36□□□□□ -0.27
GSDMB-209ENST00000479136 KCNJ4P48050 445 aa13.36□□□□□ -0.27
GSDMB-209ENST00000479136 BARGINQ6ZT62 677 aa13.36□□□□□ -0.27
GSDMB-209ENST00000479136 ZNF592Q92610 1267 aa13.36□□□□□ -0.27
GSDMB-209ENST00000479136 ANXA1P04083 346 aa13.36□□□□□ -0.27
GSDMB-209ENST00000479136 PHAXQ9H814 394 aaKnown RBP13.36□□□□□ -0.27
GSDMB-209ENST00000479136 KIF3AQ9Y496 699 aa13.36□□□□□ -0.27
GSDMB-209ENST00000479136 SIPA1L3O60292 1781 aaPredicted RBP13.36□□□□□ -0.27
GSDMB-209ENST00000479136 TNS2Q63HR2 1409 aa13.36□□□□□ -0.27
GSDMB-209ENST00000479136 PTCD1O75127 700 aaKnown RBP13.35□□□□□ -0.27
GSDMB-209ENST00000479136 TIGD1Q96MW7 591 aa13.35□□□□□ -0.27
GSDMB-209ENST00000479136 BCL9LQ86UU0 1499 aa13.35□□□□□ -0.27
GSDMB-209ENST00000479136 HEG1Q9ULI3 1381 aa13.35□□□□□ -0.27
GSDMB-209ENST00000479136 HSP90AB3PQ58FF7 597 aa13.35□□□□□ -0.27
GSDMB-209ENST00000479136 RWDD1Q9H446 243 aaPredicted RBP13.35□□□□□ -0.27
GSDMB-209ENST00000479136 PCDHB15Q9Y5E8 787 aa13.35□□□□□ -0.27
GSDMB-209ENST00000479136 CCT4P50991 539 aaKnown RBP13.34□□□□□ -0.27
GSDMB-209ENST00000479136 INTS3Q68E01 1043 aaKnown RBP13.34□□□□□ -0.27
GSDMB-209ENST00000479136 AFF2P51816 1311 aa13.34□□□□□ -0.27
GSDMB-209ENST00000479136 SHANK3Q9BYB0 1731 aa13.34□□□□□ -0.27
GSDMB-209ENST00000479136 ZBTB7BO15156 539 aaPredicted RBP13.33□□□□□ -0.27
GSDMB-209ENST00000479136 MCM5P33992 734 aa13.33□□□□□ -0.27
GSDMB-209ENST00000479136 CERS3Q8IU89 383 aa13.33□□□□□ -0.27
GSDMB-209ENST00000479136 ZBTB40Q9NUA8 1239 aa13.33□□□□□ -0.27
GSDMB-209ENST00000479136 IGHDP01880 384 aa13.33□□□□□ -0.28
GSDMB-209ENST00000479136 MYL6BP14649 208 aa13.33□□□□□ -0.28
GSDMB-209ENST00000479136 GABPB1Q06547 395 aaPredicted RBP13.33□□□□□ -0.28
GSDMB-209ENST00000479136 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
GSDMB-209ENST00000479136 PIGBQ92521 554 aa13.33□□□□□ -0.28
GSDMB-209ENST00000479136 HYPKQ9NX55 129 aa13.33□□□□□ -0.28
GSDMB-209ENST00000479136 RGS12O14924 1447 aa13.33□□□□□ -0.28
GSDMB-209ENST00000479136 USP16Q9Y5T5 823 aa13.32□□□□□ -0.28
GSDMB-209ENST00000479136 PRIM1P49642 420 aaKnown RBP13.32□□□□□ -0.28
GSDMB-209ENST00000479136 AIMP1Q12904 312 aaKnown RBP13.32□□□□□ -0.28
GSDMB-209ENST00000479136 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
GSDMB-209ENST00000479136 MARCH10Q8NA82 808 aaPredicted RBP13.32□□□□□ -0.28
GSDMB-209ENST00000479136 ACSBG1Q96GR2 724 aa13.32□□□□□ -0.28
GSDMB-209ENST00000479136 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
GSDMB-209ENST00000479136 C1orf115Q9H7X2 142 aa13.32□□□□□ -0.28
GSDMB-209ENST00000479136 DDX21Q9NR30 783 aaKnown RBP eCLIP13.32□□□□□ -0.28
GSDMB-209ENST00000479136 KDM2BQ8NHM5 1336 aa13.32□□□□□ -0.28
GSDMB-209ENST00000479136 DDX58O95786 925 aaKnown RBP13.31□□□□□ -0.28
GSDMB-209ENST00000479136 ASAP1Q9ULH1 1129 aa13.31□□□□□ -0.28
GSDMB-209ENST00000479136 MCM4P33991 863 aa13.31□□□□□ -0.28
GSDMB-209ENST00000479136 CBX1P83916 185 aa13.31□□□□□ -0.28
GSDMB-209ENST00000479136 ANTXR1Q9H6X2 564 aa13.31□□□□□ -0.28
GSDMB-209ENST00000479136 WNK3Q9BYP7 1800 aa13.3□□□□□ -0.28
GSDMB-209ENST00000479136 BANK1Q8NDB2 785 aa13.3□□□□□ -0.28
GSDMB-209ENST00000479136 PI4KAP2A4QPH2 592 aa13.29□□□□□ -0.28
GSDMB-209ENST00000479136 PIP4K2AP48426 406 aaPredicted RBP13.29□□□□□ -0.28
GSDMB-209ENST00000479136 PI4KAP1Q8N8J0 262 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms