RNA–Protein interactions for RNA: ENST00000479107.1

HLA-DPA1-247, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 5,025 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-247ENST00000479107 BICDL1Q6ZP65 573 aa10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CCDC191Q8NCU4 936 aa10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 C16orf45Q96MC5 204 aaPredicted RBP10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 FSD1Q9BTV5 496 aa10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 STARD3NLO95772 234 aa10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 LARP1Q6PKG0 1096 aaKnown RBP10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SMC5Q8IY18 1101 aa10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SSH1Q8WYL5 1049 aa10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ZNF219Q9P2Y4 722 aaPredicted RBP10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ZNF652Q9Y2D9 606 aa10.14□□□□□ -0.79
HLA-DPA1-247ENST00000479107 BMS1Q14692 1282 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 RAB3GAP1Q15042 981 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 UPF3BQ9BZI7 483 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 DCCP43146 1447 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 TBC1D9Q6ZT07 1266 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SLC16A10Q8TF71 515 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 RBM27Q9P2N5 1060 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 METP08581 1390 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ATP6V1AP38606 617 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 RBM25P49756 843 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 NOL10Q9BSC4 688 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SLC12A5Q9H2X9 1139 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 PRDM15P57071 1507 aaPredicted RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 A0A087WZG4 1122 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ME1P48163 572 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CEBPZQ03701 1054 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CCDC30Q5VVM6 783 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ZNF530Q6P9A1 599 aaPredicted RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 FNBP4Q8N3X1 1017 aaPredicted RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 JMYQ8N9B5 988 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 GBP3Q9H0R5 595 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 PDRG1Q9NUG6 133 aa10.13□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SFPQP23246 707 aaKnown RBP eCLIP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 HDAC1Q13547 482 aaPredicted RBP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 RALYLQ86SE5 291 aaKnown RBP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SCAND2PQ9GZW5 306 aaPredicted RBP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ABCC11Q96J66 1382 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 TMPOP42166 694 aaKnown RBP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 MSL1Q68DK7 614 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CLIP2Q9UDT6 1046 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CFAP65Q6ZU64 1925 aaKnown RBP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 C1orf167Q5SNV9 1468 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SMTNL1A8MU46 457 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 KIF20AO95235 890 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 TTLL5Q6EMB2 1281 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 MTFR1LQ9H019 292 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 YTHDC2Q9H6S0 1430 aaKnown RBP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 KIAA0232Q92628 1395 aa10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 DHX16O60231 1041 aaKnown RBP10.12□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CLSTN1O94985 981 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ERC1Q8IUD2 1116 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 NOL7Q9UMY1 257 aaKnown RBP10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SOS2Q07890 1332 aaPredicted RBP10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 GTF2F1P35269 517 aaKnown RBP eCLIP10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 FAM177A1Q8N128 213 aaPredicted RBP10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 REREQ9P2R6 1566 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 TXNRD1Q16881 649 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 BLOC1S2Q6QNY1 142 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 JDP2Q8WYK2 163 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CCDC102AQ96A19 550 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 GNPATO15228 680 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ZSCAN12O43309 604 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 TRIM27P14373 513 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 NFXL1Q6ZNB6 911 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 PPFIBP1Q86W92 1011 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 FEZ1Q99689 392 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 DACH1Q9UI36 760 aa10.11□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SLC4A2P04920 1241 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 PIP4K2AP48426 406 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ST5P78524 1137 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 KDM2BQ8NHM5 1336 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CAMK4Q16566 473 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 JAKMIP1Q96N16 626 aaKnown RBP10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 TRERF1Q96PN7 1200 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 TNS3Q68CZ2 1445 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CAVIN2O95810 425 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 PRIM1P49642 420 aaKnown RBP10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 UBE2HP62256 183 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 ANO10Q9NW15 660 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 PCDHB15Q9Y5E8 787 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 MED1Q15648 1581 aaPredicted RBP10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 NAP1L1P55209 391 aaKnown RBP10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 GSDMDP57764 484 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SKIDA1Q1XH10 827 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 FAM107BQ9H098 131 aa10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 DDX19AQ9NUU7 478 aaKnown RBP10.1□□□□□ -0.79
HLA-DPA1-247ENST00000479107 IFNL2Q8IZJ0 200 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SH2B1Q9NRF2 756 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 RICTORQ6R327 1708 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 POLR3GO15318 223 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 HSP90AB3PQ58FF7 597 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 SBNO1A3KN83 1393 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 HCLS1P14317 486 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CEP135Q66GS9 1140 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 KIF6Q6ZMV9 814 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CCDC171Q6TFL3 1326 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 CTAGE5O15320 804 aa10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 URI1O94763 535 aaPredicted RBP10.09□□□□□ -0.79
HLA-DPA1-247ENST00000479107 NUCB1Q02818 461 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms