RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 TRPM2O94759 1503 aa9.37□□□□□ -0.91
HOXB3-209ENST00000478644 ITGAEP38570 1179 aa9.37□□□□□ -0.91
HOXB3-209ENST00000478644 SCARF1Q14162 830 aa9.37□□□□□ -0.91
HOXB3-209ENST00000478644 GJD4Q96KN9 370 aaPredicted RBP9.37□□□□□ -0.91
HOXB3-209ENST00000478644 TERTO14746 1132 aaKnown RBP9.36□□□□□ -0.91
HOXB3-209ENST00000478644 WFS1O76024 890 aa9.36□□□□□ -0.91
HOXB3-209ENST00000478644 ZNF326Q5BKZ1 582 aaKnown RBP9.36□□□□□ -0.91
HOXB3-209ENST00000478644 NPAS3Q8IXF0 933 aa9.36□□□□□ -0.91
HOXB3-209ENST00000478644 MEIOBQ8N635 442 aa9.36□□□□□ -0.91
HOXB3-209ENST00000478644 ADAM32Q8TC27 787 aa9.36□□□□□ -0.91
HOXB3-209ENST00000478644 SLC10A4Q96EP9 437 aa9.36□□□□□ -0.91
HOXB3-209ENST00000478644 KCTD15Q96SI1 283 aaPredicted RBP9.36□□□□□ -0.91
HOXB3-209ENST00000478644 DCCP43146 1447 aa9.36□□□□□ -0.91
HOXB3-209ENST00000478644 AMOTL2Q9Y2J4 779 aa9.35□□□□□ -0.91
HOXB3-209ENST00000478644 XIRP1Q702N8 1843 aaKnown RBP9.35□□□□□ -0.91
HOXB3-209ENST00000478644 JCADQ9P266 1359 aa9.35□□□□□ -0.91
HOXB3-209ENST00000478644 SPATA31A6Q5VVP1 1343 aa9.34□□□□□ -0.91
HOXB3-209ENST00000478644 HFM1A2PYH4 1435 aa9.34□□□□□ -0.91
HOXB3-209ENST00000478644 ADAMTS13Q76LX8 1427 aa9.34□□□□□ -0.91
HOXB3-209ENST00000478644 NAIPQ13075 1403 aa9.33□□□□□ -0.92
HOXB3-209ENST00000478644 DHX9Q08211 1270 aaKnown RBP9.33□□□□□ -0.92
HOXB3-209ENST00000478644 PPP1R26Q5T8A7 1209 aaPredicted RBP9.33□□□□□ -0.92
HOXB3-209ENST00000478644 Q6ZVU0 165 aa9.33□□□□□ -0.92
HOXB3-209ENST00000478644 PURBQ96QR8 312 aaKnown RBP9.33□□□□□ -0.92
HOXB3-209ENST00000478644 NXF1Q9UBU9 619 aaKnown RBP9.33□□□□□ -0.92
HOXB3-209ENST00000478644 SPHKAPQ2M3C7 1700 aa9.33□□□□□ -0.92
HOXB3-209ENST00000478644 SETBP1Q9Y6X0 1596 aa9.33□□□□□ -0.92
HOXB3-209ENST00000478644 ROBO1Q9Y6N7 1651 aa9.32□□□□□ -0.92
HOXB3-209ENST00000478644 TRIM52Q96A61 297 aa9.32□□□□□ -0.92
HOXB3-209ENST00000478644 PGPEP1Q9NXJ5 209 aa9.32□□□□□ -0.92
HOXB3-209ENST00000478644 WIPF1O43516 503 aa9.31□□□□□ -0.92
HOXB3-209ENST00000478644 NBPF20Q3BBV1 942 aa9.31□□□□□ -0.92
HOXB3-209ENST00000478644 ZNF772Q68DY9 489 aaPredicted RBP9.31□□□□□ -0.92
HOXB3-209ENST00000478644 LINC00528Q8N1L1 170 aa9.31□□□□□ -0.92
HOXB3-209ENST00000478644 TSEN34Q9BSV6 310 aaKnown RBP9.31□□□□□ -0.92
HOXB3-209ENST00000478644 MYO5BQ9ULV0 1848 aa9.31□□□□□ -0.92
HOXB3-209ENST00000478644 ZBBXA8MT70 800 aa9.3□□□□□ -0.92
HOXB3-209ENST00000478644 ESPNB1AK53 854 aa9.3□□□□□ -0.92
HOXB3-209ENST00000478644 INTS6LQ5JSJ4 861 aaKnown RBP9.3□□□□□ -0.92
HOXB3-209ENST00000478644 LCE2CQ5TA81 110 aa9.3□□□□□ -0.92
HOXB3-209ENST00000478644 LRRC59Q96AG4 307 aaKnown RBP9.3□□□□□ -0.92
HOXB3-209ENST00000478644 KIF1BO60333 1816 aa9.3□□□□□ -0.92
HOXB3-209ENST00000478644 UPP2O95045 317 aa9.29□□□□□ -0.92
HOXB3-209ENST00000478644 SOS2Q07890 1332 aaPredicted RBP9.29□□□□□ -0.92
HOXB3-209ENST00000478644 PHLPP1O60346 1717 aa9.28□□□□□ -0.92
HOXB3-209ENST00000478644 DZIP3Q86Y13 1208 aaKnown RBP9.28□□□□□ -0.92
HOXB3-209ENST00000478644 SEPT12Q8IYM1 358 aa9.28□□□□□ -0.92
HOXB3-209ENST00000478644 MTMR14Q8NCE2 650 aa9.28□□□□□ -0.92
HOXB3-209ENST00000478644 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.28□□□□□ -0.92
HOXB3-209ENST00000478644 AHDC1Q5TGY3 1603 aaPredicted RBP9.27□□□□□ -0.92
HOXB3-209ENST00000478644 GPR37L1O60883 481 aa9.27□□□□□ -0.93
HOXB3-209ENST00000478644 MEX3CQ5U5Q3 659 aaKnown RBP9.27□□□□□ -0.93
HOXB3-209ENST00000478644 SLC16A10Q8TF71 515 aa9.27□□□□□ -0.93
HOXB3-209ENST00000478644 PTCH1Q13635 1447 aa9.27□□□□□ -0.93
HOXB3-209ENST00000478644 PRAG1Q86YV5 1406 aa9.27□□□□□ -0.93
HOXB3-209ENST00000478644 ANKRD30BQ9BXX2 1392 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 CCDC144AA2RUR9 1427 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 H3BM21 787 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 BMP2P12643 396 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 MCCD1P59942 119 aaPredicted RBP9.26□□□□□ -0.93
HOXB3-209ENST00000478644 C6orf118Q5T5N4 469 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 BRINP3Q76B58 766 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 CCDC125Q86Z20 511 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 NEXMIFQ5QGS0 1516 aa9.26□□□□□ -0.93
HOXB3-209ENST00000478644 XRN1Q8IZH2 1706 aaKnown RBP9.25□□□□□ -0.93
HOXB3-209ENST00000478644 PTPRUQ92729 1446 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 ADGRL3Q9HAR2 1447 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 APBB1O00213 710 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 SPINT1O43278 529 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 FBXO45P0C2W1 286 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 CBLBQ13191 982 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 SIRT1Q96EB6 747 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 SNRKQ9NRH2 765 aa9.25□□□□□ -0.93
HOXB3-209ENST00000478644 METP08581 1390 aa9.24□□□□□ -0.93
HOXB3-209ENST00000478644 LRPPRCP42704 1394 aaKnown RBP9.24□□□□□ -0.93
HOXB3-209ENST00000478644 CLTCL1P53675 1640 aa9.24□□□□□ -0.93
HOXB3-209ENST00000478644 MPHOSPH9Q99550 1183 aa9.24□□□□□ -0.93
HOXB3-209ENST00000478644 RGS17Q9UGC6 210 aaPredicted RBP9.24□□□□□ -0.93
HOXB3-209ENST00000478644 NDUFB9Q9Y6M9 179 aa9.24□□□□□ -0.93
HOXB3-209ENST00000478644 COL16A1Q07092 1604 aaPredicted RBP9.23□□□□□ -0.93
HOXB3-209ENST00000478644 NRXN3Q9Y4C0 1643 aa9.23□□□□□ -0.93
HOXB3-209ENST00000478644 SHPRHQ149N8 1683 aa9.23□□□□□ -0.93
HOXB3-209ENST00000478644 ERVH48-1M5A8F1 160 aa9.23□□□□□ -0.93
HOXB3-209ENST00000478644 LILRA1O75019 489 aa9.23□□□□□ -0.93
HOXB3-209ENST00000478644 NR1H3Q13133 447 aa9.23□□□□□ -0.93
HOXB3-209ENST00000478644 PODXL2Q9NZ53 605 aa9.23□□□□□ -0.93
HOXB3-209ENST00000478644 MST1RQ04912 1400 aa9.22□□□□□ -0.93
HOXB3-209ENST00000478644 SOBPA7XYQ1 873 aa9.22□□□□□ -0.93
HOXB3-209ENST00000478644 MAN1A2O60476 641 aa9.22□□□□□ -0.93
HOXB3-209ENST00000478644 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
HOXB3-209ENST00000478644 IRF7Q92985 503 aa9.22□□□□□ -0.93
HOXB3-209ENST00000478644 TMPRSS4Q9NRS4 437 aa9.22□□□□□ -0.93
HOXB3-209ENST00000478644 DNMT3LQ9UJW3 386 aa9.22□□□□□ -0.93
HOXB3-209ENST00000478644 ASXL1Q8IXJ9 1541 aa9.21□□□□□ -0.93
HOXB3-209ENST00000478644 VSIG8P0DPA2 414 aa9.21□□□□□ -0.94
HOXB3-209ENST00000478644 RXRBP28702 533 aa9.21□□□□□ -0.94
HOXB3-209ENST00000478644 ZNF784Q8NCA9 323 aaPredicted RBP9.21□□□□□ -0.94
HOXB3-209ENST00000478644 CDK12Q9NYV4 1490 aaPredicted RBP9.21□□□□□ -0.94
HOXB3-209ENST00000478644 TTLL8A6PVC2 850 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms