RNA–Protein interactions for RNA: ENST00000478484.5

GPN1-207, Transcript of GPN-loop GTPase 1, humanhuman

TSL 3

Gene GPN1, Length 826 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-207ENST00000478484 SPG7Q9UQ90 795 aa9.53□□□□□ -0.88
GPN1-207ENST00000478484 WNK3Q9BYP7 1800 aa9.53□□□□□ -0.88
GPN1-207ENST00000478484 NBPF26B4DH59 902 aa9.52□□□□□ -0.89
GPN1-207ENST00000478484 NEFMP07197 916 aa9.52□□□□□ -0.89
GPN1-207ENST00000478484 RBM26Q5T8P6 1007 aaKnown RBP9.52□□□□□ -0.89
GPN1-207ENST00000478484 MARCH10Q8NA82 808 aaPredicted RBP9.52□□□□□ -0.89
GPN1-207ENST00000478484 TATDN2Q93075 761 aa9.52□□□□□ -0.89
GPN1-207ENST00000478484 ADAMTS8Q9UP79 889 aa9.52□□□□□ -0.89
GPN1-207ENST00000478484 MEGF6O75095 1541 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 RGPD1P0DJD0 1748 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 PARP4Q9UKK3 1724 aaKnown RBP9.51□□□□□ -0.89
GPN1-207ENST00000478484 DISP2A7MBM2 1401 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 C3orf80F5H4A9 247 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 FCHSD2O94868 740 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 PTGDRQ13258 359 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 ZNF530Q6P9A1 599 aaPredicted RBP9.51□□□□□ -0.89
GPN1-207ENST00000478484 NUDT18Q6ZVK8 323 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 CCDC146Q8IYE0 955 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 FAM9BQ8IZU0 186 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
GPN1-207ENST00000478484 THSD7AQ9UPZ6 1657 aa9.51□□□□□ -0.89
GPN1-207ENST00000478484 OVOS2A0A0G2JMS6 1433 aa9.5□□□□□ -0.89
GPN1-207ENST00000478484 AMOTQ4VCS5 1084 aa9.5□□□□□ -0.89
GPN1-207ENST00000478484 PHACTR3Q96KR7 559 aa9.5□□□□□ -0.89
GPN1-207ENST00000478484 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
GPN1-207ENST00000478484 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 SOWAHBA6NEL2 793 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 CYP27B1O15528 508 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 MTHFSDQ2M296 383 aaKnown RBP9.49□□□□□ -0.89
GPN1-207ENST00000478484 C1orf141Q5JVX7 400 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 PNISRQ8TF01 805 aaKnown RBP9.49□□□□□ -0.89
GPN1-207ENST00000478484 ACSBG1Q96GR2 724 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 LRCH3Q96II8 777 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 PCDH11XQ9BZA7 1347 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 PCDH11YQ9BZA8 1340 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 LRRC37A3O60309 1634 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 KDRP35968 1356 aa9.49□□□□□ -0.89
GPN1-207ENST00000478484 NCAPD2Q15021 1401 aa9.48□□□□□ -0.89
GPN1-207ENST00000478484 CCER2I3L3R5 266 aa9.48□□□□□ -0.89
GPN1-207ENST00000478484 NEUROD2Q15784 382 aa9.48□□□□□ -0.89
GPN1-207ENST00000478484 FAM196AQ6ZSG2 479 aa9.48□□□□□ -0.89
GPN1-207ENST00000478484 IFNL2Q8IZJ0 200 aa9.48□□□□□ -0.89
GPN1-207ENST00000478484 SYTL4Q96C24 671 aaPredicted RBP9.48□□□□□ -0.89
GPN1-207ENST00000478484 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.48□□□□□ -0.89
GPN1-207ENST00000478484 TNS2Q63HR2 1409 aa9.48□□□□□ -0.89
GPN1-207ENST00000478484 TRIM37O94972 964 aa9.47□□□□□ -0.89
GPN1-207ENST00000478484 PHKG2P15735 406 aa9.47□□□□□ -0.89
GPN1-207ENST00000478484 MPRIPQ6WCQ1 1025 aa9.47□□□□□ -0.89
GPN1-207ENST00000478484 TTC13Q8NBP0 860 aa9.47□□□□□ -0.89
GPN1-207ENST00000478484 RUNDC1Q96C34 613 aa9.47□□□□□ -0.89
GPN1-207ENST00000478484 PLA2G2EQ9NZK7 142 aa9.47□□□□□ -0.89
GPN1-207ENST00000478484 PKD1L3Q7Z443 1732 aa9.46□□□□□ -0.89
GPN1-207ENST00000478484 KCNQ2O43526 872 aa9.46□□□□□ -0.9
GPN1-207ENST00000478484 AKAP4Q5JQC9 854 aa9.46□□□□□ -0.9
GPN1-207ENST00000478484 SAMD7Q7Z3H4 446 aa9.46□□□□□ -0.9
GPN1-207ENST00000478484 GAS2L2Q8NHY3 880 aa9.46□□□□□ -0.9
GPN1-207ENST00000478484 PLEKHF1Q96S99 279 aa9.46□□□□□ -0.9
GPN1-207ENST00000478484 RRP7AQ9Y3A4 280 aaKnown RBP9.46□□□□□ -0.9
GPN1-207ENST00000478484 SHANK3Q9BYB0 1731 aa9.45□□□□□ -0.9
GPN1-207ENST00000478484 GNAT3A8MTJ3 354 aa9.45□□□□□ -0.9
GPN1-207ENST00000478484 HSP90AB1P08238 724 aaKnown RBP9.45□□□□□ -0.9
GPN1-207ENST00000478484 RIPK4P57078 832 aa9.45□□□□□ -0.9
GPN1-207ENST00000478484 SF3B2Q13435 895 aaKnown RBP9.45□□□□□ -0.9
GPN1-207ENST00000478484 PTF1AQ7RTS3 328 aa9.45□□□□□ -0.9
GPN1-207ENST00000478484 LGR6Q9HBX8 967 aa9.45□□□□□ -0.9
GPN1-207ENST00000478484 HPS5Q9UPZ3 1129 aa9.45□□□□□ -0.9
GPN1-207ENST00000478484 SALL2Q9Y467 1007 aaPredicted RBP9.45□□□□□ -0.9
GPN1-207ENST00000478484 APAF1O14727 1248 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 RNF40O75150 1001 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 APBA3O96018 575 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 TMPOP42166 694 aaKnown RBP9.44□□□□□ -0.9
GPN1-207ENST00000478484 CABP4P57796 275 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 NFE2L2Q16236 605 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 RTF1Q92541 710 aaKnown RBP9.44□□□□□ -0.9
GPN1-207ENST00000478484 DCAF5Q96JK2 942 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 WBP1LQ9NX94 342 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 SBF2Q86WG5 1849 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 DLG5Q8TDM6 1919 aa9.44□□□□□ -0.9
GPN1-207ENST00000478484 VIRMAQ69YN4 1812 aaKnown RBP9.43□□□□□ -0.9
GPN1-207ENST00000478484 MAP3K5Q99683 1374 aa9.43□□□□□ -0.9
GPN1-207ENST00000478484 TULP1O00294 542 aaPredicted RBP9.43□□□□□ -0.9
GPN1-207ENST00000478484 RNMTO43148 476 aaKnown RBP9.43□□□□□ -0.9
GPN1-207ENST00000478484 DCTN1Q14203 1278 aa9.43□□□□□ -0.9
GPN1-207ENST00000478484 FAM161AQ3B820 660 aa9.43□□□□□ -0.9
GPN1-207ENST00000478484 MCM10Q7L590 875 aa9.43□□□□□ -0.9
GPN1-207ENST00000478484 TMOD3Q9NYL9 352 aa9.43□□□□□ -0.9
GPN1-207ENST00000478484 ITGB4P16144 1822 aa9.42□□□□□ -0.9
GPN1-207ENST00000478484 TEFQ10587 303 aa9.42□□□□□ -0.9
GPN1-207ENST00000478484 NFATC2IPQ8NCF5 419 aa9.42□□□□□ -0.9
GPN1-207ENST00000478484 IL17REQ8NFR9 667 aa9.42□□□□□ -0.9
GPN1-207ENST00000478484 TSR3Q9UJK0 312 aaKnown RBP9.42□□□□□ -0.9
GPN1-207ENST00000478484 DOT1LQ8TEK3 1739 aa9.42□□□□□ -0.9
GPN1-207ENST00000478484 PLEKHG2Q9H7P9 1386 aa9.41□□□□□ -0.9
GPN1-207ENST00000478484 ERVV-2B6SEH9 535 aa9.41□□□□□ -0.9
GPN1-207ENST00000478484 PPP4CP60510 307 aa9.41□□□□□ -0.9
GPN1-207ENST00000478484 PIGBQ92521 554 aa9.41□□□□□ -0.9
GPN1-207ENST00000478484 THUMPD2Q9BTF0 503 aaKnown RBP9.41□□□□□ -0.9
GPN1-207ENST00000478484 SCN11AQ9UI33 1791 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms