RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 IGF1RP08069 1367 aa10.33□□□□□ -0.76
ITGA4-209ENST00000478440 GDF11O95390 407 aa10.32□□□□□ -0.76
ITGA4-209ENST00000478440 IGFBP4P22692 258 aa10.32□□□□□ -0.76
ITGA4-209ENST00000478440 TXLNAP40222 546 aa10.32□□□□□ -0.76
ITGA4-209ENST00000478440 UBAP2LQ14157 1087 aaKnown RBP10.32□□□□□ -0.76
ITGA4-209ENST00000478440 SCG3Q8WXD2 468 aaKnown RBP10.32□□□□□ -0.76
ITGA4-209ENST00000478440 ANKIB1Q9P2G1 1089 aa10.32□□□□□ -0.76
ITGA4-209ENST00000478440 FGFR3P22607 806 aa10.31□□□□□ -0.76
ITGA4-209ENST00000478440 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
ITGA4-209ENST00000478440 ARXQ96QS3 562 aa10.31□□□□□ -0.76
ITGA4-209ENST00000478440 LRRC4BQ9NT99 713 aa10.31□□□□□ -0.76
ITGA4-209ENST00000478440 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
ITGA4-209ENST00000478440 NOVA2Q9UNW9 492 aaKnown RBP10.31□□□□□ -0.76
ITGA4-209ENST00000478440 BNIP3LO60238 219 aa10.3□□□□□ -0.76
ITGA4-209ENST00000478440 PBXIP1Q96AQ6 731 aa10.3□□□□□ -0.76
ITGA4-209ENST00000478440 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
ITGA4-209ENST00000478440 C2orf49Q9BVC5 232 aaPredicted RBP10.3□□□□□ -0.76
ITGA4-209ENST00000478440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.3□□□□□ -0.76
ITGA4-209ENST00000478440 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.29□□□□□ -0.76
ITGA4-209ENST00000478440 FAM157BP0CG42 384 aa10.29□□□□□ -0.76
ITGA4-209ENST00000478440 LAMC2Q13753 1193 aa10.29□□□□□ -0.76
ITGA4-209ENST00000478440 SWI5Q1ZZU3 235 aa10.29□□□□□ -0.76
ITGA4-209ENST00000478440 CDCA8Q53HL2 280 aa10.29□□□□□ -0.76
ITGA4-209ENST00000478440 ZNF385CQ66K41 422 aaPredicted RBP10.29□□□□□ -0.76
ITGA4-209ENST00000478440 CHMP7Q8WUX9 453 aaPredicted RBP10.29□□□□□ -0.76
ITGA4-209ENST00000478440 ATG7O95352 703 aa10.28□□□□□ -0.76
ITGA4-209ENST00000478440 BMP4P12644 408 aa10.28□□□□□ -0.76
ITGA4-209ENST00000478440 RASSF7Q02833 373 aa10.28□□□□□ -0.76
ITGA4-209ENST00000478440 PHACTR1Q9C0D0 580 aa10.28□□□□□ -0.76
ITGA4-209ENST00000478440 GDF2Q9UK05 429 aaPredicted RBP10.28□□□□□ -0.76
ITGA4-209ENST00000478440 FOXO3O43524 673 aa10.27□□□□□ -0.77
ITGA4-209ENST00000478440 C21orf2O43822 256 aa10.27□□□□□ -0.77
ITGA4-209ENST00000478440 FAM182BQ5T319 152 aa10.27□□□□□ -0.77
ITGA4-209ENST00000478440 VTI1AQ96AJ9 217 aa10.27□□□□□ -0.77
ITGA4-209ENST00000478440 HCN4Q9Y3Q4 1203 aa10.27□□□□□ -0.77
ITGA4-209ENST00000478440 ACIN1Q9UKV3 1341 aaKnown RBP10.27□□□□□ -0.77
ITGA4-209ENST00000478440 ARID3CA6NKF2 412 aa10.26□□□□□ -0.77
ITGA4-209ENST00000478440 KHNYNO15037 678 aaKnown RBP10.26□□□□□ -0.77
ITGA4-209ENST00000478440 CELA2BP08218 269 aaPredicted RBP10.26□□□□□ -0.77
ITGA4-209ENST00000478440 BCRP11274 1271 aa10.26□□□□□ -0.77
ITGA4-209ENST00000478440 TNP2Q05952 138 aa10.26□□□□□ -0.77
ITGA4-209ENST00000478440 ALDH16A1Q8IZ83 802 aa10.26□□□□□ -0.77
ITGA4-209ENST00000478440 OXCT2Q9BYC2 517 aaPredicted RBP10.26□□□□□ -0.77
ITGA4-209ENST00000478440 KRTAP9-2Q9BYQ4 174 aa10.26□□□□□ -0.77
ITGA4-209ENST00000478440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.25□□□□□ -0.77
ITGA4-209ENST00000478440 RNF225M0QZC1 329 aaPredicted RBP10.25□□□□□ -0.77
ITGA4-209ENST00000478440 MAPTP10636 758 aaKnown RBP10.25□□□□□ -0.77
ITGA4-209ENST00000478440 WEE1P30291 646 aa10.25□□□□□ -0.77
ITGA4-209ENST00000478440 LRRC69Q6ZNQ3 347 aa10.25□□□□□ -0.77
ITGA4-209ENST00000478440 GOLGA6L1Q8N7Z2 621 aa10.25□□□□□ -0.77
ITGA4-209ENST00000478440 DCDC2BA2VCK2 349 aa10.24□□□□□ -0.77
ITGA4-209ENST00000478440 SRPK2P78362 688 aaKnown RBP10.24□□□□□ -0.77
ITGA4-209ENST00000478440 SH3PXD2AQ5TCZ1 1133 aa10.24□□□□□ -0.77
ITGA4-209ENST00000478440 LYPD4Q6UWN0 246 aa10.24□□□□□ -0.77
ITGA4-209ENST00000478440 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
ITGA4-209ENST00000478440 KLRG1Q96E93 195 aa10.24□□□□□ -0.77
ITGA4-209ENST00000478440 AVENQ9NQS1 362 aaPredicted RBP10.24□□□□□ -0.77
ITGA4-209ENST00000478440 MARK1Q9P0L2 795 aa10.24□□□□□ -0.77
ITGA4-209ENST00000478440 RTN1Q16799 776 aa10.23□□□□□ -0.77
ITGA4-209ENST00000478440 WHAMMQ8TF30 809 aa10.23□□□□□ -0.77
ITGA4-209ENST00000478440 ACDQ96AP0 544 aa10.23□□□□□ -0.77
ITGA4-209ENST00000478440 ADAMTS8Q9UP79 889 aa10.23□□□□□ -0.77
ITGA4-209ENST00000478440 EFSO43281 561 aa10.22□□□□□ -0.77
ITGA4-209ENST00000478440 PPP1R15AO75807 674 aaPredicted RBP10.22□□□□□ -0.77
ITGA4-209ENST00000478440 ARHGEF15O94989 841 aa10.22□□□□□ -0.77
ITGA4-209ENST00000478440 ARAFP10398 606 aa10.22□□□□□ -0.77
ITGA4-209ENST00000478440 MARSP56192 900 aaKnown RBP10.22□□□□□ -0.77
ITGA4-209ENST00000478440 CCDC82Q8N4S0 544 aa10.22□□□□□ -0.77
ITGA4-209ENST00000478440 NGLY1Q96IV0 654 aa10.22□□□□□ -0.77
ITGA4-209ENST00000478440 KRTAP9-6A0A140TA67 174 aa10.21□□□□□ -0.77
ITGA4-209ENST00000478440 OIP5O43482 229 aa10.21□□□□□ -0.77
ITGA4-209ENST00000478440 CTBSQ01459 385 aa10.21□□□□□ -0.77
ITGA4-209ENST00000478440 NEDD1Q8NHV4 660 aa10.21□□□□□ -0.77
ITGA4-209ENST00000478440 PRR12Q9ULL5 1215 aa10.21□□□□□ -0.77
ITGA4-209ENST00000478440 NEUROD1Q13562 356 aa10.2□□□□□ -0.78
ITGA4-209ENST00000478440 SCARF2Q96GP6 870 aaPredicted RBP10.2□□□□□ -0.78
ITGA4-209ENST00000478440 SUSD3Q96L08 255 aa10.2□□□□□ -0.78
ITGA4-209ENST00000478440 CEP63Q96MT8 703 aa10.2□□□□□ -0.78
ITGA4-209ENST00000478440 ZMIZ1Q9ULJ6 1067 aa10.2□□□□□ -0.78
ITGA4-209ENST00000478440 CD33P20138 364 aa10.19□□□□□ -0.78
ITGA4-209ENST00000478440 ADH6P28332 368 aa10.19□□□□□ -0.78
ITGA4-209ENST00000478440 IER5Q5VY09 327 aa10.19□□□□□ -0.78
ITGA4-209ENST00000478440 SLCO4C1Q6ZQN7 724 aa10.19□□□□□ -0.78
ITGA4-209ENST00000478440 PSMG3-AS1Q96PY0 264 aa10.19□□□□□ -0.78
ITGA4-209ENST00000478440 IGHA1P01876 353 aa10.18□□□□□ -0.78
ITGA4-209ENST00000478440 ERCC6Q03468 1493 aa10.17□□□□□ -0.78
ITGA4-209ENST00000478440 C2CD2LO14523 706 aa10.17□□□□□ -0.78
ITGA4-209ENST00000478440 LGR5O75473 907 aa10.17□□□□□ -0.78
ITGA4-209ENST00000478440 GPAT2Q6NUI2 795 aa10.17□□□□□ -0.78
ITGA4-209ENST00000478440 PODNQ7Z5L7 613 aa10.17□□□□□ -0.78
ITGA4-209ENST00000478440 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
ITGA4-209ENST00000478440 BRD7Q9NPI1 651 aa10.17□□□□□ -0.78
ITGA4-209ENST00000478440 TGFBR3LH3BV60 316 aa10.16□□□□□ -0.78
ITGA4-209ENST00000478440 KCNQ4P56696 695 aa10.16□□□□□ -0.78
ITGA4-209ENST00000478440 ZNF468Q5VIY5 522 aaPredicted RBP10.16□□□□□ -0.78
ITGA4-209ENST00000478440 GALNT6Q8NCL4 622 aa10.16□□□□□ -0.78
ITGA4-209ENST00000478440 EDARADDQ8WWZ3 215 aa10.16□□□□□ -0.78
ITGA4-209ENST00000478440 MYO19Q96H55 970 aa10.16□□□□□ -0.78
ITGA4-209ENST00000478440 HSH2DQ96JZ2 352 aa10.16□□□□□ -0.78
ITGA4-209ENST00000478440 GGA1Q9UJY5 639 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms