RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 COX20Q5RI15 118 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 LRRC69Q6ZNQ3 347 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 TXNDC2Q86VQ3 553 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 NLRP8Q86W28 1048 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 GTF3C2Q8WUA4 911 aaPredicted RBP7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 SAP130Q9H0E3 1048 aa7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 CUEDC1Q9NWM3 386 aaPredicted RBP7.23□□□□□ -1.25
SMARCA1-204ENST00000478420 ABL1P00519 1130 aa7.22□□□□□ -1.25
SMARCA1-204ENST00000478420 VEGFBP49765 207 aa7.22□□□□□ -1.25
SMARCA1-204ENST00000478420 FIGNL1Q6PIW4 674 aa7.22□□□□□ -1.25
SMARCA1-204ENST00000478420 SUSD3Q96L08 255 aa7.22□□□□□ -1.25
SMARCA1-204ENST00000478420 KLK14Q9P0G3 267 aa7.22□□□□□ -1.25
SMARCA1-204ENST00000478420 LRFN2Q9ULH4 789 aa7.22□□□□□ -1.25
SMARCA1-204ENST00000478420 H3BM21 787 aa7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 TERTO14746 1132 aaKnown RBP7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 BRD2P25440 801 aaKnown RBP7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 FOXR1Q6PIV2 292 aa7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 SV2AQ7L0J3 742 aa7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 VWA5B2Q8N398 1253 aa7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 HELQQ8TDG4 1101 aa7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 SLC16A10Q8TF71 515 aa7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 NANOS1Q8WY41 292 aaKnown RBP7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 ZNF837Q96EG3 531 aaPredicted RBP7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 HSH2DQ96JZ2 352 aa7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 GNEQ9Y223 722 aaKnown RBP7.21□□□□□ -1.26
SMARCA1-204ENST00000478420 TGFBR3LH3BV60 316 aa7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 SERPINB4P48594 390 aa7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 ZNF280CQ8ND82 737 aa7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 GTPBP3Q969Y2 492 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 KLRG1Q96E93 195 aa7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 IFT43Q96FT9 208 aa7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 ZCCHC2Q9C0B9 1178 aaKnown RBP7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 STIM2Q9P246 746 aa7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 EGFL7Q9UHF1 273 aa7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
SMARCA1-204ENST00000478420 THBS1P07996 1170 aa7.19□□□□□ -1.26
SMARCA1-204ENST00000478420 SF3B2Q13435 895 aaKnown RBP7.19□□□□□ -1.26
SMARCA1-204ENST00000478420 SAMD5Q5TGI4 173 aa7.19□□□□□ -1.26
SMARCA1-204ENST00000478420 IER5Q5VY09 327 aa7.19□□□□□ -1.26
SMARCA1-204ENST00000478420 TRERF1Q96PN7 1200 aa7.19□□□□□ -1.26
SMARCA1-204ENST00000478420 PCDHGC4Q9Y5F7 938 aa7.19□□□□□ -1.26
SMARCA1-204ENST00000478420 IVNS1ABPQ9Y6Y0 642 aa7.19□□□□□ -1.26
SMARCA1-204ENST00000478420 TNFRSF10BO14763 440 aa7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 ATXN7O15265 892 aaPredicted RBP7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 FKBP4Q02790 459 aaKnown RBP eCLIP7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 ZNF211Q13398 564 aaPredicted RBP7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 ABTB2Q8N961 1025 aa7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 CEP63Q96MT8 703 aa7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 ANO2Q9NQ90 1003 aa7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 PHF24Q9UPV7 400 aa7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 BCS1LQ9Y276 419 aa7.18□□□□□ -1.26
SMARCA1-204ENST00000478420 ICMTO60725 284 aa7.17□□□□□ -1.26
SMARCA1-204ENST00000478420 FAM157BP0CG42 384 aa7.17□□□□□ -1.26
SMARCA1-204ENST00000478420 MTMR3Q13615 1198 aa7.17□□□□□ -1.26
SMARCA1-204ENST00000478420 UBAP2LQ14157 1087 aaKnown RBP7.17□□□□□ -1.26
SMARCA1-204ENST00000478420 BTLAQ7Z6A9 289 aa7.17□□□□□ -1.26
SMARCA1-204ENST00000478420 DCDC2BA2VCK2 349 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 H3BRB1 525 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 GPR25O00155 361 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 KHNYNO15037 678 aaKnown RBP7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 MICAL2O94851 1124 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 FAM13AO94988 1023 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 IDH3AP50213 366 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 TREML1Q86YW5 311 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 GLYCTKQ8IVS8 523 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 ETFBKMTQ8IXQ9 262 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 IRF7Q92985 503 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 CFHR5Q9BXR6 569 aa7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 TUT1Q9H6E5 874 aaKnown RBP7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 ATXN7L1Q9ULK2 861 aaPredicted RBP7.16□□□□□ -1.26
SMARCA1-204ENST00000478420 BNIP3LO60238 219 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 VSIG8P0DPA2 414 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 MPSTP25325 297 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 TYRO3Q06418 890 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 NOM1Q5C9Z4 860 aaKnown RBP7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 ALKBH2Q6NS38 261 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 ABHD17AQ96GS6 310 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 BRD7Q9NPI1 651 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 NDFIP2Q9NV92 336 aa7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 DMGDHQ9UI17 866 aaKnown RBP7.15□□□□□ -1.26
SMARCA1-204ENST00000478420 ZBTB7CA1YPR0 619 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 SOWAHDA6NJG2 315 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 MAPTP10636 758 aaKnown RBP7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 EPB42P16452 691 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 NPR3P17342 541 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 ARSDP51689 593 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 TNP2Q05952 138 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 NFX1Q12986 1120 aaKnown RBP7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 FAM26DQ5JW98 314 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 FAM13BQ9NYF5 915 aa7.14□□□□□ -1.27
SMARCA1-204ENST00000478420 ERBB4Q15303 1308 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 ZBTB39O15060 712 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 EFSO43281 561 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 WFS1O76024 890 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 INPP5BP32019 993 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 ZAP70P43403 619 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 EIF1AXP47813 144 aaKnown RBP7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 AAMPQ13685 434 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 LAMC2Q13753 1193 aa7.13□□□□□ -1.27
SMARCA1-204ENST00000478420 GPR161Q8N6U8 529 aaKnown RBP7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms