RNA–Protein interactions for RNA: ENST00000478369.5

VANGL1-206, Transcript of VANGL planar cell polarity protein 1, humanhuman

TSL 3

Gene VANGL1, Length 363 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-206ENST00000478369 CEP350Q5VT06 3117 aa14.29□□□□□ -0.12
VANGL1-206ENST00000478369 STYK1Q6J9G0 422 aa14.29□□□□□ -0.12
VANGL1-206ENST00000478369 TPTE2Q6XPS3 522 aa14.29□□□□□ -0.12
VANGL1-206ENST00000478369 NBPF5PQ86XG9 351 aaPredicted RBP14.29□□□□□ -0.12
VANGL1-206ENST00000478369 CNKSR1Q969H4 720 aa14.29□□□□□ -0.12
VANGL1-206ENST00000478369 ZNF622Q969S3 477 aaKnown RBP eCLIP14.29□□□□□ -0.12
VANGL1-206ENST00000478369 SBF1O95248 1867 aa14.29□□□□□ -0.12
VANGL1-206ENST00000478369 ERVV-1B6SEH8 477 aa14.28□□□□□ -0.12
VANGL1-206ENST00000478369 SRGNP10124 158 aa14.28□□□□□ -0.12
VANGL1-206ENST00000478369 RIPK4P57078 832 aa14.28□□□□□ -0.12
VANGL1-206ENST00000478369 ERBB4Q15303 1308 aa14.28□□□□□ -0.12
VANGL1-206ENST00000478369 SOGA3Q5TF21 947 aa14.28□□□□□ -0.12
VANGL1-206ENST00000478369 MASTLQ96GX5 879 aa14.28□□□□□ -0.12
VANGL1-206ENST00000478369 RASSF7Q02833 373 aa14.27□□□□□ -0.13
VANGL1-206ENST00000478369 NMRK2Q9NPI5 230 aa14.27□□□□□ -0.13
VANGL1-206ENST00000478369 NIP7Q9Y221 180 aaKnown RBP eCLIP14.27□□□□□ -0.13
VANGL1-206ENST00000478369 LTBP3Q9NS15 1303 aa14.26□□□□□ -0.13
VANGL1-206ENST00000478369 KLRG2A4D1S0 409 aaPredicted RBP14.26□□□□□ -0.13
VANGL1-206ENST00000478369 TMPOP42166 694 aaKnown RBP14.26□□□□□ -0.13
VANGL1-206ENST00000478369 C16orf71Q8IYS4 520 aaPredicted RBP14.26□□□□□ -0.13
VANGL1-206ENST00000478369 RBM46Q8TBY0 533 aaKnown RBP14.26□□□□□ -0.13
VANGL1-206ENST00000478369 THUMPD2Q9BTF0 503 aaKnown RBP14.26□□□□□ -0.13
VANGL1-206ENST00000478369 TSPYL4Q9UJ04 414 aa14.26□□□□□ -0.13
VANGL1-206ENST00000478369 MAP3K15Q6ZN16 1313 aa14.25□□□□□ -0.13
VANGL1-206ENST00000478369 COL11A2P13942 1736 aaPredicted RBP14.25□□□□□ -0.13
VANGL1-206ENST00000478369 NFKBIEO00221 500 aa14.25□□□□□ -0.13
VANGL1-206ENST00000478369 C21orf2O43822 256 aa14.25□□□□□ -0.13
VANGL1-206ENST00000478369 WDR43Q15061 677 aaKnown RBP eCLIP14.25□□□□□ -0.13
VANGL1-206ENST00000478369 KIF6Q6ZMV9 814 aa14.25□□□□□ -0.13
VANGL1-206ENST00000478369 CCDC24Q8N4L8 307 aa14.25□□□□□ -0.13
VANGL1-206ENST00000478369 NYXQ9GZU5 481 aa14.25□□□□□ -0.13
VANGL1-206ENST00000478369 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
VANGL1-206ENST00000478369 GLTPD2A6NH11 291 aa14.24□□□□□ -0.13
VANGL1-206ENST00000478369 NPR1P16066 1061 aa14.24□□□□□ -0.13
VANGL1-206ENST00000478369 FSTL1Q12841 308 aa14.24□□□□□ -0.13
VANGL1-206ENST00000478369 HLFQ16534 295 aa14.24□□□□□ -0.13
VANGL1-206ENST00000478369 PRPF40BQ6NWY9 871 aaKnown RBP14.24□□□□□ -0.13
VANGL1-206ENST00000478369 RRP7AQ9Y3A4 280 aaKnown RBP14.24□□□□□ -0.13
VANGL1-206ENST00000478369 APLP1P51693 650 aa14.23□□□□□ -0.13
VANGL1-206ENST00000478369 RUNDC1Q96C34 613 aa14.23□□□□□ -0.13
VANGL1-206ENST00000478369 ARFGEF2Q9Y6D5 1785 aa14.23□□□□□ -0.13
VANGL1-206ENST00000478369 IBTKQ9P2D0 1353 aaPredicted RBP14.22□□□□□ -0.13
VANGL1-206ENST00000478369 MYL6BP14649 208 aa14.22□□□□□ -0.13
VANGL1-206ENST00000478369 GTF2E1P29083 439 aaPredicted RBP14.22□□□□□ -0.13
VANGL1-206ENST00000478369 PRELPP51888 382 aa14.22□□□□□ -0.13
VANGL1-206ENST00000478369 DPY19L2Q6NUT2 758 aa14.22□□□□□ -0.13
VANGL1-206ENST00000478369 NGEFQ8N5V2 710 aa14.22□□□□□ -0.13
VANGL1-206ENST00000478369 TAOK3Q9H2K8 898 aa14.22□□□□□ -0.13
VANGL1-206ENST00000478369 PRKRIP1Q9H875 184 aaPredicted RBP14.22□□□□□ -0.13
VANGL1-206ENST00000478369 RRAGCQ9HB90 399 aa14.22□□□□□ -0.13
VANGL1-206ENST00000478369 FER1L6Q2WGJ9 1857 aa14.22□□□□□ -0.13
VANGL1-206ENST00000478369 VEGFAP15692 232 aaPredicted RBP14.21□□□□□ -0.13
VANGL1-206ENST00000478369 ALDH1B1P30837 517 aa14.21□□□□□ -0.13
VANGL1-206ENST00000478369 GIGYF2Q6Y7W6 1299 aaKnown RBP14.21□□□□□ -0.13
VANGL1-206ENST00000478369 C7orf43Q8WVR3 580 aa14.21□□□□□ -0.13
VANGL1-206ENST00000478369 RIC1Q4ADV7 1423 aa14.21□□□□□ -0.13
VANGL1-206ENST00000478369 SLX4Q8IY92 1834 aa14.2□□□□□ -0.14
VANGL1-206ENST00000478369 CHL1O00533 1208 aa14.2□□□□□ -0.14
VANGL1-206ENST00000478369 ERFEQ4G0M1 354 aa14.2□□□□□ -0.14
VANGL1-206ENST00000478369 CCDC93Q567U6 631 aa14.2□□□□□ -0.14
VANGL1-206ENST00000478369 TTLL7Q6ZT98 887 aa14.2□□□□□ -0.14
VANGL1-206ENST00000478369 ZNF219Q9P2Y4 722 aaPredicted RBP14.2□□□□□ -0.14
VANGL1-206ENST00000478369 TIAM2Q8IVF5 1701 aa14.2□□□□□ -0.14
VANGL1-206ENST00000478369 NUP98P52948 1817 aa14.2□□□□□ -0.14
VANGL1-206ENST00000478369 FAM177BA6PVY3 158 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 PDIA6Q15084 440 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 CRY2Q49AN0 593 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 PARP10Q53GL7 1025 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 LRP10Q7Z4F1 713 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 CCDC146Q8IYE0 955 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 ZNF34Q8IZ26 560 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 RTKN2Q8IZC4 609 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 SMC1BQ8NDV3 1235 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 ZBTB3Q9H5J0 574 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 ADAMTS8Q9UP79 889 aa14.19□□□□□ -0.14
VANGL1-206ENST00000478369 DICER1Q9UPY3 1922 aaKnown RBP14.19□□□□□ -0.14
VANGL1-206ENST00000478369 CCDC88AQ3V6T2 1871 aa14.18□□□□□ -0.14
VANGL1-206ENST00000478369 HOXB7P09629 217 aa14.18□□□□□ -0.14
VANGL1-206ENST00000478369 EIF2S2P20042 333 aaKnown RBP14.18□□□□□ -0.14
VANGL1-206ENST00000478369 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
VANGL1-206ENST00000478369 PPP1R42Q7Z4L9 355 aa14.18□□□□□ -0.14
VANGL1-206ENST00000478369 TRIM35Q9UPQ4 493 aa14.18□□□□□ -0.14
VANGL1-206ENST00000478369 UBN2Q6ZU65 1347 aa14.17□□□□□ -0.14
VANGL1-206ENST00000478369 FKBP4Q02790 459 aaKnown RBP eCLIP14.17□□□□□ -0.14
VANGL1-206ENST00000478369 GRIPAP1Q4V328 841 aa14.17□□□□□ -0.14
VANGL1-206ENST00000478369 WDR90Q96KV7 1748 aa14.17□□□□□ -0.14
VANGL1-206ENST00000478369 RNF123Q5XPI4 1314 aa14.16□□□□□ -0.14
VANGL1-206ENST00000478369 ZNF316A6NFI3 1004 aaPredicted RBP14.16□□□□□ -0.14
VANGL1-206ENST00000478369 HOXA10P31260 410 aaPredicted RBP14.16□□□□□ -0.14
VANGL1-206ENST00000478369 HSP90AB3PQ58FF7 597 aa14.16□□□□□ -0.14
VANGL1-206ENST00000478369 SUSD4Q5VX71 490 aa14.16□□□□□ -0.14
VANGL1-206ENST00000478369 CC2D2BQ6DHV5 1058 aa14.16□□□□□ -0.14
VANGL1-206ENST00000478369 NUTM1Q86Y26 1132 aa14.16□□□□□ -0.14
VANGL1-206ENST00000478369 CFAP44Q96MT7 982 aa14.16□□□□□ -0.14
VANGL1-206ENST00000478369 DDX21Q9NR30 783 aaKnown RBP eCLIP14.16□□□□□ -0.14
VANGL1-206ENST00000478369 CACNA1SQ13698 1873 aa14.16□□□□□ -0.14
VANGL1-206ENST00000478369 ABCC12Q96J65 1359 aa14.15□□□□□ -0.14
VANGL1-206ENST00000478369 NTSR2O95665 410 aa14.15□□□□□ -0.14
VANGL1-206ENST00000478369 GPTP24298 496 aa14.15□□□□□ -0.14
VANGL1-206ENST00000478369 RPGRQ92834 1020 aaKnown RBP14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms