RNA–Protein interactions for RNA: ENST00000478197.1

C2orf88-207, Transcript of chromosome 2 open reading frame 88, humanhuman

TSL 4

Gene C2orf88, Length 567 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-207ENST00000478197 ZNF330Q9Y3S2 320 aaPredicted RBP19.26■□□□□ 0.67
C2orf88-207ENST00000478197 KDM3BQ7LBC6 1761 aa19.26■□□□□ 0.67
C2orf88-207ENST00000478197 SERPINB2P05120 415 aa19.25■□□□□ 0.67
C2orf88-207ENST00000478197 IL6STP40189 918 aaPredicted RBP19.25■□□□□ 0.67
C2orf88-207ENST00000478197 TRMT2AQ8IZ69 625 aaKnown RBP19.25■□□□□ 0.67
C2orf88-207ENST00000478197 ZNF428Q96B54 188 aa19.25■□□□□ 0.67
C2orf88-207ENST00000478197 MBIPQ9NS73 344 aa19.25■□□□□ 0.67
C2orf88-207ENST00000478197 LAMB4A4D0S4 1761 aa19.24■□□□□ 0.67
C2orf88-207ENST00000478197 LAS1LQ9Y4W2 734 aaKnown RBP19.24■□□□□ 0.67
C2orf88-207ENST00000478197 ANKRD31Q8N7Z5 1873 aa19.24■□□□□ 0.67
C2orf88-207ENST00000478197 KCNQ3O43525 872 aa19.23■□□□□ 0.67
C2orf88-207ENST00000478197 EIF4A1P60842 406 aaKnown RBP19.23■□□□□ 0.67
C2orf88-207ENST00000478197 CCDC88AQ3V6T2 1871 aa19.22■□□□□ 0.67
C2orf88-207ENST00000478197 SNRPA1P09661 255 aaKnown RBP19.22■□□□□ 0.67
C2orf88-207ENST00000478197 BICDL1Q6ZP65 573 aa19.22■□□□□ 0.67
C2orf88-207ENST00000478197 TBC1D2BQ9UPU7 963 aa19.22■□□□□ 0.67
C2orf88-207ENST00000478197 FANCIQ9NVI1 1328 aa19.22■□□□□ 0.67
C2orf88-207ENST00000478197 A1BGP04217 495 aa19.21■□□□□ 0.67
C2orf88-207ENST00000478197 CACNA1SQ13698 1873 aa19.21■□□□□ 0.67
C2orf88-207ENST00000478197 DUSP27Q5VZP5 1158 aa19.2■□□□□ 0.66
C2orf88-207ENST00000478197 TBC1D9BQ66K14 1250 aa19.2■□□□□ 0.66
C2orf88-207ENST00000478197 CARMIL3Q8ND23 1372 aa19.19■□□□□ 0.66
C2orf88-207ENST00000478197 C9orf131Q5VYM1 1079 aa19.19■□□□□ 0.66
C2orf88-207ENST00000478197 USP16Q9Y5T5 823 aa19.19■□□□□ 0.66
C2orf88-207ENST00000478197 COL11A2P13942 1736 aaPredicted RBP19.19■□□□□ 0.66
C2orf88-207ENST00000478197 H0YIN7 160 aa19.18■□□□□ 0.66
C2orf88-207ENST00000478197 MIS18AQ9NYP9 233 aa19.18■□□□□ 0.66
C2orf88-207ENST00000478197 ERBB4Q15303 1308 aa19.18■□□□□ 0.66
C2orf88-207ENST00000478197 DZIP3Q86Y13 1208 aaKnown RBP19.17■□□□□ 0.66
C2orf88-207ENST00000478197 C2CD5Q86YS7 1000 aa19.17■□□□□ 0.66
C2orf88-207ENST00000478197 YTHDC1Q96MU7 727 aaKnown RBP19.17■□□□□ 0.66
C2orf88-207ENST00000478197 SPINK5Q9NQ38 1064 aaPredicted RBP19.17■□□□□ 0.66
C2orf88-207ENST00000478197 TNRC6CQ9HCJ0 1690 aaKnown RBP19.17■□□□□ 0.66
C2orf88-207ENST00000478197 KIF3CO14782 793 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 NPHP1O15259 732 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 TTLL6Q8N841 843 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
C2orf88-207ENST00000478197 SETDB2Q96T68 719 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 RNF181Q9P0P0 153 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 PDZRN3Q9UPQ7 1066 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 TIAM2Q8IVF5 1701 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 ARFGEF2Q9Y6D5 1785 aa19.16■□□□□ 0.66
C2orf88-207ENST00000478197 PRAMEF22A3QJZ6 481 aa19.15■□□□□ 0.66
C2orf88-207ENST00000478197 CAMTA2O94983 1202 aa19.15■□□□□ 0.66
C2orf88-207ENST00000478197 PDE6BP35913 854 aa19.15■□□□□ 0.66
C2orf88-207ENST00000478197 PIP4K2AP48426 406 aaPredicted RBP19.15■□□□□ 0.66
C2orf88-207ENST00000478197 CDCA7LQ96GN5 454 aa19.15■□□□□ 0.66
C2orf88-207ENST00000478197 TWISTNBQ3B726 338 aaPredicted RBP19.14■□□□□ 0.65
C2orf88-207ENST00000478197 PRR5LQ6MZQ0 368 aa19.14■□□□□ 0.65
C2orf88-207ENST00000478197 BRIP1Q9BX63 1249 aa19.14■□□□□ 0.65
C2orf88-207ENST00000478197 ZNF652Q9Y2D9 606 aa19.14■□□□□ 0.65
C2orf88-207ENST00000478197 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
C2orf88-207ENST00000478197 CCDC30Q5VVM6 783 aa19.13■□□□□ 0.65
C2orf88-207ENST00000478197 CNBD1Q8NA66 436 aa19.13■□□□□ 0.65
C2orf88-207ENST00000478197 KDM2BQ8NHM5 1336 aa19.13■□□□□ 0.65
C2orf88-207ENST00000478197 FER1L6Q2WGJ9 1857 aa19.13■□□□□ 0.65
C2orf88-207ENST00000478197 DICER1Q9UPY3 1922 aaKnown RBP19.13■□□□□ 0.65
C2orf88-207ENST00000478197 CACNA1FO60840 1977 aa19.12■□□□□ 0.65
C2orf88-207ENST00000478197 HSPA6P17066 643 aa19.12■□□□□ 0.65
C2orf88-207ENST00000478197 ST5P78524 1137 aa19.12■□□□□ 0.65
C2orf88-207ENST00000478197 CLEC4GQ6UXB4 293 aa19.12■□□□□ 0.65
C2orf88-207ENST00000478197 NMRK2Q9NPI5 230 aa19.12■□□□□ 0.65
C2orf88-207ENST00000478197 NUP98P52948 1817 aa19.11■□□□□ 0.65
C2orf88-207ENST00000478197 TOMM70O94826 608 aa19.11■□□□□ 0.65
C2orf88-207ENST00000478197 ALDH1L2Q3SY69 923 aa19.11■□□□□ 0.65
C2orf88-207ENST00000478197 CCDC24Q8N4L8 307 aa19.11■□□□□ 0.65
C2orf88-207ENST00000478197 C8orf58Q8NAV2 365 aa19.11■□□□□ 0.65
C2orf88-207ENST00000478197 ZNF622Q969S3 477 aaKnown RBP eCLIP19.11■□□□□ 0.65
C2orf88-207ENST00000478197 ZC3H4Q9UPT8 1303 aaKnown RBP19.1■□□□□ 0.65
C2orf88-207ENST00000478197 VAMP4O75379 141 aa19.1■□□□□ 0.65
C2orf88-207ENST00000478197 RASSF7Q02833 373 aa19.1■□□□□ 0.65
C2orf88-207ENST00000478197 HDGFL1Q5TGJ6 251 aa19.1■□□□□ 0.65
C2orf88-207ENST00000478197 STK31Q9BXU1 1019 aa19.1■□□□□ 0.65
C2orf88-207ENST00000478197 DBF4Q9UBU7 674 aaPredicted RBP19.1■□□□□ 0.65
C2orf88-207ENST00000478197 NBPF26B4DH59 902 aa19.09■□□□□ 0.65
C2orf88-207ENST00000478197 LMNB1P20700 586 aa19.09■□□□□ 0.65
C2orf88-207ENST00000478197 NBPF10Q6P3W6 841 aaKnown RBP19.09■□□□□ 0.65
C2orf88-207ENST00000478197 C16orf71Q8IYS4 520 aaPredicted RBP19.09■□□□□ 0.65
C2orf88-207ENST00000478197 NBPF15Q8N660 670 aa19.09■□□□□ 0.65
C2orf88-207ENST00000478197 SLX4Q8IY92 1834 aa19.09■□□□□ 0.65
C2orf88-207ENST00000478197 RGL2O15211 777 aa19.08■□□□□ 0.64
C2orf88-207ENST00000478197 NBPF5PQ86XG9 351 aaPredicted RBP19.08■□□□□ 0.64
C2orf88-207ENST00000478197 BRPF1P55201 1214 aaPredicted RBP19.07■□□□□ 0.64
C2orf88-207ENST00000478197 DDX21Q9NR30 783 aaKnown RBP eCLIP19.07■□□□□ 0.64
C2orf88-207ENST00000478197 HYPKQ9NX55 129 aa19.07■□□□□ 0.64
C2orf88-207ENST00000478197 TSPYL6Q8N831 410 aa19.06■□□□□ 0.64
C2orf88-207ENST00000478197 CNKSR1Q969H4 720 aa19.06■□□□□ 0.64
C2orf88-207ENST00000478197 NIP7Q9Y221 180 aaKnown RBP eCLIP19.06■□□□□ 0.64
C2orf88-207ENST00000478197 NFKBIEO00221 500 aa19.05■□□□□ 0.64
C2orf88-207ENST00000478197 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
C2orf88-207ENST00000478197 C21orf2O43822 256 aa19.05■□□□□ 0.64
C2orf88-207ENST00000478197 SRGNP10124 158 aa19.05■□□□□ 0.64
C2orf88-207ENST00000478197 STYK1Q6J9G0 422 aa19.05■□□□□ 0.64
C2orf88-207ENST00000478197 TPTE2Q6XPS3 522 aa19.05■□□□□ 0.64
C2orf88-207ENST00000478197 EIF2S2P20042 333 aaKnown RBP19.04■□□□□ 0.64
C2orf88-207ENST00000478197 KRT24Q2M2I5 525 aa19.04■□□□□ 0.64
C2orf88-207ENST00000478197 RBM46Q8TBY0 533 aaKnown RBP19.04■□□□□ 0.64
C2orf88-207ENST00000478197 MASTLQ96GX5 879 aa19.04■□□□□ 0.64
C2orf88-207ENST00000478197 WDR90Q96KV7 1748 aa19.04■□□□□ 0.64
C2orf88-207ENST00000478197 ZNF219Q9P2Y4 722 aaPredicted RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms