RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 POLMQ9NP87 494 aaPredicted RBP6.69□□□□□ -1.34
SF3B6-202ENST00000478050 GPRASP1Q5JY77 1395 aa6.69□□□□□ -1.34
SF3B6-202ENST00000478050 ABCA9Q8IUA7 1624 aa6.68□□□□□ -1.34
SF3B6-202ENST00000478050 PHF20L1A8MW92 1017 aa6.68□□□□□ -1.34
SF3B6-202ENST00000478050 CTSOP43234 321 aaPredicted RBP6.68□□□□□ -1.34
SF3B6-202ENST00000478050 RELBQ01201 579 aa6.68□□□□□ -1.34
SF3B6-202ENST00000478050 SRSF11Q05519 484 aaKnown RBP6.68□□□□□ -1.34
SF3B6-202ENST00000478050 DHX9Q08211 1270 aaKnown RBP6.68□□□□□ -1.34
SF3B6-202ENST00000478050 CCDC184Q52MB2 194 aa6.68□□□□□ -1.34
SF3B6-202ENST00000478050 HELBQ8NG08 1087 aaPredicted RBP6.68□□□□□ -1.34
SF3B6-202ENST00000478050 AGBL1Q96MI9 1066 aa6.68□□□□□ -1.34
SF3B6-202ENST00000478050 INSM2Q96T92 566 aaPredicted RBP6.68□□□□□ -1.34
SF3B6-202ENST00000478050 TET3O43151 1660 aa6.68□□□□□ -1.34
SF3B6-202ENST00000478050 RTEL1-TNFRSF6BF6WH68 1400 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 A2MP01023 1474 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 PLA2R1Q13018 1463 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 ERFEQ4G0M1 354 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 EFCAB2Q5VUJ9 269 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 FAM9BQ8IZU0 186 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 GPKOWQ92917 476 aaPredicted RBP eCLIP6.67□□□□□ -1.34
SF3B6-202ENST00000478050 AK7Q96M32 723 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 GPBP1L1Q9HC44 474 aaPredicted RBP6.67□□□□□ -1.34
SF3B6-202ENST00000478050 IQGAP1P46940 1657 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 KIAA1210Q9ULL0 1709 aa6.67□□□□□ -1.34
SF3B6-202ENST00000478050 TRPM2O94759 1503 aa6.66□□□□□ -1.34
SF3B6-202ENST00000478050 INO80Q9ULG1 1556 aaPredicted RBP6.66□□□□□ -1.34
SF3B6-202ENST00000478050 ADAM23O75077 832 aa6.66□□□□□ -1.34
SF3B6-202ENST00000478050 CELA2BP08218 269 aaPredicted RBP6.66□□□□□ -1.34
SF3B6-202ENST00000478050 PODNQ7Z5L7 613 aa6.66□□□□□ -1.34
SF3B6-202ENST00000478050 GALNT6Q8NCL4 622 aa6.66□□□□□ -1.34
SF3B6-202ENST00000478050 DCAF11Q8TEB1 546 aa6.66□□□□□ -1.34
SF3B6-202ENST00000478050 SLC10A4Q96EP9 437 aa6.66□□□□□ -1.34
SF3B6-202ENST00000478050 KCTD15Q96SI1 283 aaPredicted RBP6.66□□□□□ -1.34
SF3B6-202ENST00000478050 BRD4O60885 1362 aaPredicted RBP6.66□□□□□ -1.34
SF3B6-202ENST00000478050 SMG6Q86US8 1419 aaKnown RBP6.66□□□□□ -1.34
SF3B6-202ENST00000478050 NEURL4Q96JN8 1562 aa6.65□□□□□ -1.34
SF3B6-202ENST00000478050 KIF1BO60333 1816 aa6.65□□□□□ -1.34
SF3B6-202ENST00000478050 RALBP1Q15311 655 aa6.65□□□□□ -1.34
SF3B6-202ENST00000478050 PLA2G4EQ3MJ16 856 aa6.65□□□□□ -1.34
SF3B6-202ENST00000478050 BEND7Q8N7W2 519 aaPredicted RBP6.65□□□□□ -1.34
SF3B6-202ENST00000478050 DCAF5Q96JK2 942 aa6.65□□□□□ -1.34
SF3B6-202ENST00000478050 POLR3GLQ9BT43 218 aa6.65□□□□□ -1.34
SF3B6-202ENST00000478050 ZNF395Q9H8N7 513 aaPredicted RBP6.65□□□□□ -1.34
SF3B6-202ENST00000478050 CDV3Q9UKY7 258 aaKnown RBP6.65□□□□□ -1.34
SF3B6-202ENST00000478050 ST20-MTHFSA0A0A6YYL1 179 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 YY1P25490 414 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 ZBTB33Q86T24 672 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 NEDD1Q8NHV4 660 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 SPOCK3Q9BQ16 436 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 ARHGAP9Q9BRR9 750 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 PPP4R2Q9NY27 417 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 MYBBP1AQ9BQG0 1328 aaKnown RBP6.64□□□□□ -1.35
SF3B6-202ENST00000478050 ATP7AQ04656 1500 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 ZMYM4Q5VZL5 1548 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 VWDEQ8N2E2 1590 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 CFAP74Q9C0B2 1584 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 CLTCL1P53675 1640 aa6.64□□□□□ -1.35
SF3B6-202ENST00000478050 LRPPRCP42704 1394 aaKnown RBP6.63□□□□□ -1.35
SF3B6-202ENST00000478050 QPCTQ16769 361 aa6.63□□□□□ -1.35
SF3B6-202ENST00000478050 ZNF772Q68DY9 489 aaPredicted RBP6.63□□□□□ -1.35
SF3B6-202ENST00000478050 FOXR1Q6PIV2 292 aa6.63□□□□□ -1.35
SF3B6-202ENST00000478050 RICTORQ6R327 1708 aa6.63□□□□□ -1.35
SF3B6-202ENST00000478050 IL27Q8NEV9 243 aa6.63□□□□□ -1.35
SF3B6-202ENST00000478050 RNF217Q8TC41 542 aa6.63□□□□□ -1.35
SF3B6-202ENST00000478050 CNTNAP5Q8WYK1 1306 aa6.63□□□□□ -1.35
SF3B6-202ENST00000478050 IFT172Q9UG01 1749 aa6.63□□□□□ -1.35
SF3B6-202ENST00000478050 SIGLEC1Q9BZZ2 1709 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 INSRP06213 1382 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 PARD3Q8TEW0 1356 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 SPAG9O60271 1321 aaKnown RBP6.62□□□□□ -1.35
SF3B6-202ENST00000478050 WASHC2CQ9Y4E1 1318 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 SENP3-EIF4A1A0A087X0R7 540 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 PARP9Q8IXQ6 854 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 TMC1Q8TDI8 760 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 PNISRQ8TF01 805 aaKnown RBP6.62□□□□□ -1.35
SF3B6-202ENST00000478050 LIMD1Q9UGP4 676 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 NUDCQ9Y266 331 aa6.62□□□□□ -1.35
SF3B6-202ENST00000478050 KANK1Q14678 1352 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 LILRB3O75022 631 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 RXRBP28702 533 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 GAS6Q14393 721 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 PDXDC2PQ6P474 469 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 KDM4CQ9H3R0 1056 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 KDM5AP29375 1690 aaKnown RBP6.61□□□□□ -1.35
SF3B6-202ENST00000478050 MROH1Q8NDA8 1641 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 SYNMO15061 1565 aa6.61□□□□□ -1.35
SF3B6-202ENST00000478050 SCAPERQ9BY12 1400 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 KIDINS220Q9ULH0 1771 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 RNF123Q5XPI4 1314 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 PDE4DQ08499 809 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 RGL3Q3MIN7 710 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 INTS6LQ5JSJ4 861 aaKnown RBP6.6□□□□□ -1.35
SF3B6-202ENST00000478050 LCE3BQ5TA77 95 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 LYSMD3Q7Z3D4 306 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 NLRP13Q86W25 1043 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 RBM19Q9Y4C8 960 aaKnown RBP6.6□□□□□ -1.35
SF3B6-202ENST00000478050 C3P01024 1663 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 SETBP1Q9Y6X0 1596 aa6.6□□□□□ -1.35
SF3B6-202ENST00000478050 MYOM1P52179 1685 aa6.59□□□□□ -1.35
SF3B6-202ENST00000478050 ALKQ9UM73 1620 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms