RNA–Protein interactions for RNA: ENST00000477988.1

NCKAP1-204, Transcript of NCK associated protein 1, humanhuman

TSL 2

Gene NCKAP1, Length 612 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-204ENST00000477988 NEUROD2Q15784 382 aa8.74□□□□□ -1.01
NCKAP1-204ENST00000477988 MCTP1Q6DN14 999 aa8.74□□□□□ -1.01
NCKAP1-204ENST00000477988 C20orf204Q6ZNR8 217 aa8.74□□□□□ -1.01
NCKAP1-204ENST00000477988 TXNRD3Q86VQ6 643 aa8.74□□□□□ -1.01
NCKAP1-204ENST00000477988 SLC4A9Q96Q91 983 aa8.74□□□□□ -1.01
NCKAP1-204ENST00000477988 USP3Q9Y6I4 520 aa8.74□□□□□ -1.01
NCKAP1-204ENST00000477988 EIF4G2P78344 907 aaKnown RBP eCLIP8.72□□□□□ -1.01
NCKAP1-204ENST00000477988 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
NCKAP1-204ENST00000477988 LENG1Q96BZ8 264 aaPredicted RBP8.72□□□□□ -1.01
NCKAP1-204ENST00000477988 SSBP4Q9BWG4 385 aaPredicted RBP8.72□□□□□ -1.01
NCKAP1-204ENST00000477988 SLC30A3Q99726 388 aa8.71□□□□□ -1.02
NCKAP1-204ENST00000477988 SNRKQ9NRH2 765 aa8.71□□□□□ -1.02
NCKAP1-204ENST00000477988 A6NJY4 79 aa8.7□□□□□ -1.02
NCKAP1-204ENST00000477988 TMEM229AB2RXF0 380 aa8.7□□□□□ -1.02
NCKAP1-204ENST00000477988 ELNP15502 786 aa8.7□□□□□ -1.02
NCKAP1-204ENST00000477988 SLFNL1Q499Z3 407 aa8.7□□□□□ -1.02
NCKAP1-204ENST00000477988 BICDL1Q6ZP65 573 aa8.7□□□□□ -1.02
NCKAP1-204ENST00000477988 PRM3Q9NNZ6 103 aa8.7□□□□□ -1.02
NCKAP1-204ENST00000477988 ADH7P40394 386 aa8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 NRG1Q02297 640 aaPredicted RBP8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 TRAPPC3LQ5T215 181 aa8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 KRTAP4-7Q9BYR0 210 aa8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 CABP1Q9NZU7 370 aa8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 SERTAD1Q9UHV2 236 aa8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 RNF112Q9ULX5 631 aa8.69□□□□□ -1.02
NCKAP1-204ENST00000477988 A0A0A0MRY4 1105 aa8.68□□□□□ -1.02
NCKAP1-204ENST00000477988 TXLNAP40222 546 aa8.68□□□□□ -1.02
NCKAP1-204ENST00000477988 SFSWAPQ12872 951 aaKnown RBP8.68□□□□□ -1.02
NCKAP1-204ENST00000477988 COL17A1Q9UMD9 1497 aaPredicted RBP8.68□□□□□ -1.02
NCKAP1-204ENST00000477988 C7orf43Q8WVR3 580 aa8.67□□□□□ -1.02
NCKAP1-204ENST00000477988 LCE1DQ5T752 114 aa8.66□□□□□ -1.02
NCKAP1-204ENST00000477988 SHISA2Q6UWI4 295 aa8.66□□□□□ -1.02
NCKAP1-204ENST00000477988 PARP3Q9Y6F1 533 aa8.66□□□□□ -1.02
NCKAP1-204ENST00000477988 EML1O00423 815 aa8.65□□□□□ -1.02
NCKAP1-204ENST00000477988 LILRB5O75023 590 aa8.65□□□□□ -1.02
NCKAP1-204ENST00000477988 LRRC69Q6ZNQ3 347 aa8.65□□□□□ -1.02
NCKAP1-204ENST00000477988 ILDR2Q71H61 639 aa8.65□□□□□ -1.02
NCKAP1-204ENST00000477988 ZDHHC1Q8WTX9 485 aa8.65□□□□□ -1.02
NCKAP1-204ENST00000477988 FMNL2Q96PY5 1086 aa8.65□□□□□ -1.02
NCKAP1-204ENST00000477988 SPEM2Q0P670 501 aa8.64□□□□□ -1.03
NCKAP1-204ENST00000477988 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
NCKAP1-204ENST00000477988 TBC1D2BQ9UPU7 963 aa8.64□□□□□ -1.03
NCKAP1-204ENST00000477988 PAX4O43316 350 aa8.63□□□□□ -1.03
NCKAP1-204ENST00000477988 TXKP42681 527 aa8.63□□□□□ -1.03
NCKAP1-204ENST00000477988 GPC6Q9Y625 555 aaPredicted RBP8.63□□□□□ -1.03
NCKAP1-204ENST00000477988 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
NCKAP1-204ENST00000477988 RAC1P63000 192 aa8.62□□□□□ -1.03
NCKAP1-204ENST00000477988 NEUROD1Q13562 356 aa8.61□□□□□ -1.03
NCKAP1-204ENST00000477988 IRF5Q13568 498 aa8.61□□□□□ -1.03
NCKAP1-204ENST00000477988 TEAD4Q15561 434 aa8.61□□□□□ -1.03
NCKAP1-204ENST00000477988 L3MBTL2Q969R5 705 aa8.61□□□□□ -1.03
NCKAP1-204ENST00000477988 COBLO75128 1261 aa8.6□□□□□ -1.03
NCKAP1-204ENST00000477988 YBX3P16989 372 aaKnown RBP eCLIP8.6□□□□□ -1.03
NCKAP1-204ENST00000477988 RAB44Q7Z6P3 723 aaPredicted RBP8.6□□□□□ -1.03
NCKAP1-204ENST00000477988 SCHIP1Q9P0W5 487 aaPredicted RBP8.6□□□□□ -1.03
NCKAP1-204ENST00000477988 NOS2P35228 1153 aa8.59□□□□□ -1.03
NCKAP1-204ENST00000477988 KCNQ4P56696 695 aa8.59□□□□□ -1.03
NCKAP1-204ENST00000477988 FMR1NBQ8N0W7 255 aaPredicted RBP8.59□□□□□ -1.03
NCKAP1-204ENST00000477988 PLPP7Q8NBV4 271 aa8.59□□□□□ -1.03
NCKAP1-204ENST00000477988 PCDHGA11Q9Y5H2 935 aa8.59□□□□□ -1.03
NCKAP1-204ENST00000477988 USP21Q9UK80 565 aa8.58□□□□□ -1.04
NCKAP1-204ENST00000477988 WASHC4Q2M389 1173 aa8.57□□□□□ -1.04
NCKAP1-204ENST00000477988 NEUROD4Q9HD90 331 aa8.57□□□□□ -1.04
NCKAP1-204ENST00000477988 BACH1O14867 736 aa8.56□□□□□ -1.04
NCKAP1-204ENST00000477988 SOX11P35716 441 aa8.56□□□□□ -1.04
NCKAP1-204ENST00000477988 AFF1P51825 1210 aaKnown RBP8.56□□□□□ -1.04
NCKAP1-204ENST00000477988 JPH1Q9HDC5 661 aaPredicted RBP8.56□□□□□ -1.04
NCKAP1-204ENST00000477988 EPHA4P54764 986 aa8.55□□□□□ -1.04
NCKAP1-204ENST00000477988 VAC14Q08AM6 782 aa8.55□□□□□ -1.04
NCKAP1-204ENST00000477988 WFDC12Q8WWY7 111 aa8.55□□□□□ -1.04
NCKAP1-204ENST00000477988 BRD7Q9NPI1 651 aa8.55□□□□□ -1.04
NCKAP1-204ENST00000477988 PCMTD2Q9NV79 361 aa8.55□□□□□ -1.04
NCKAP1-204ENST00000477988 ARID1BQ8NFD5 2236 aaPredicted RBP8.54□□□□□ -1.04
NCKAP1-204ENST00000477988 SLC6A14Q9UN76 642 aa8.54□□□□□ -1.04
NCKAP1-204ENST00000477988 KCNH4Q9UQ05 1017 aa8.54□□□□□ -1.04
NCKAP1-204ENST00000477988 SEMA3FQ13275 785 aa8.53□□□□□ -1.04
NCKAP1-204ENST00000477988 DMRTC2Q8IXT2 367 aaPredicted RBP8.53□□□□□ -1.04
NCKAP1-204ENST00000477988 NUDT8Q8WV74 236 aa8.53□□□□□ -1.04
NCKAP1-204ENST00000477988 NOS3P29474 1203 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 IREB2P48200 963 aaKnown RBP8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 SH3PXD2AQ5TCZ1 1133 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 PRR23CQ6ZRP0 262 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 SLC51AQ86UW1 340 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 RHPN1Q8TCX5 695 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 BHMTQ93088 406 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 CEP63Q96MT8 703 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 ZNF358Q9NW07 568 aa8.52□□□□□ -1.05
NCKAP1-204ENST00000477988 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
NCKAP1-204ENST00000477988 TYRO3Q06418 890 aa8.51□□□□□ -1.05
NCKAP1-204ENST00000477988 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.51□□□□□ -1.05
NCKAP1-204ENST00000477988 MEGF10Q96KG7 1140 aa8.51□□□□□ -1.05
NCKAP1-204ENST00000477988 UBE2OQ9C0C9 1292 aaKnown RBP8.51□□□□□ -1.05
NCKAP1-204ENST00000477988 ZNF232Q9UNY5 417 aa8.51□□□□□ -1.05
NCKAP1-204ENST00000477988 CD97P48960 835 aa8.5□□□□□ -1.05
NCKAP1-204ENST00000477988 C1orf53Q5VUE5 145 aa8.5□□□□□ -1.05
NCKAP1-204ENST00000477988 PSAPL1Q6NUJ1 521 aa8.5□□□□□ -1.05
NCKAP1-204ENST00000477988 FBXO11Q86XK2 927 aa8.5□□□□□ -1.05
NCKAP1-204ENST00000477988 SLC9A9Q8IVB4 645 aa8.5□□□□□ -1.05
NCKAP1-204ENST00000477988 DTWD1Q8N5C7 304 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 150.8 ms