RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 RTN1Q16799 776 aa8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 SAMD5Q5TGI4 173 aa8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 RHPN1Q8TCX5 695 aa8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 TRERF1Q96PN7 1200 aa8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 CFHR5Q9BXR6 569 aa8.57□□□□□ -1.04
SMNDC1-205ENST00000477763 MYO19Q96H55 970 aa8.56□□□□□ -1.04
SMNDC1-205ENST00000477763 CNTNAP3BQ96NU0 1288 aa8.56□□□□□ -1.04
SMNDC1-205ENST00000477763 CNTNAP3Q9BZ76 1288 aa8.56□□□□□ -1.04
SMNDC1-205ENST00000477763 ANKIB1Q9P2G1 1089 aa8.56□□□□□ -1.04
SMNDC1-205ENST00000477763 PHF24Q9UPV7 400 aa8.56□□□□□ -1.04
SMNDC1-205ENST00000477763 PTCD1O75127 700 aaKnown RBP8.55□□□□□ -1.04
SMNDC1-205ENST00000477763 RETREG2Q8NC44 543 aa8.55□□□□□ -1.04
SMNDC1-205ENST00000477763 ZCCHC2Q9C0B9 1178 aaKnown RBP8.55□□□□□ -1.04
SMNDC1-205ENST00000477763 NDFIP2Q9NV92 336 aa8.55□□□□□ -1.04
SMNDC1-205ENST00000477763 PCDHGC4Q9Y5F7 938 aa8.55□□□□□ -1.04
SMNDC1-205ENST00000477763 GJA3Q9Y6H8 435 aa8.55□□□□□ -1.04
SMNDC1-205ENST00000477763 SSFA2P28290 1259 aa8.54□□□□□ -1.04
SMNDC1-205ENST00000477763 NGLY1Q96IV0 654 aa8.54□□□□□ -1.04
SMNDC1-205ENST00000477763 QTRT2Q9H974 415 aaKnown RBP8.54□□□□□ -1.04
SMNDC1-205ENST00000477763 NEUROD4Q9HD90 331 aa8.54□□□□□ -1.04
SMNDC1-205ENST00000477763 ATXN7L1Q9ULK2 861 aaPredicted RBP8.54□□□□□ -1.04
SMNDC1-205ENST00000477763 ATXN7O15265 892 aaPredicted RBP8.53□□□□□ -1.04
SMNDC1-205ENST00000477763 FAM157BP0CG42 384 aa8.53□□□□□ -1.04
SMNDC1-205ENST00000477763 PDIA4P13667 645 aaKnown RBP8.53□□□□□ -1.04
SMNDC1-205ENST00000477763 RNFT1Q5M7Z0 435 aa8.53□□□□□ -1.04
SMNDC1-205ENST00000477763 B4GALNT3Q6L9W6 998 aa8.53□□□□□ -1.04
SMNDC1-205ENST00000477763 COL25A1Q9BXS0 654 aaPredicted RBP8.53□□□□□ -1.04
SMNDC1-205ENST00000477763 KCNMA1Q12791 1236 aa8.52□□□□□ -1.05
SMNDC1-205ENST00000477763 GAS6Q14393 721 aa8.52□□□□□ -1.05
SMNDC1-205ENST00000477763 IER5Q5VY09 327 aa8.52□□□□□ -1.05
SMNDC1-205ENST00000477763 LRRC69Q6ZNQ3 347 aa8.52□□□□□ -1.05
SMNDC1-205ENST00000477763 SUSD3Q96L08 255 aa8.52□□□□□ -1.05
SMNDC1-205ENST00000477763 GPR25O00155 361 aa8.51□□□□□ -1.05
SMNDC1-205ENST00000477763 BNIP3LO60238 219 aa8.51□□□□□ -1.05
SMNDC1-205ENST00000477763 LAMC2Q13753 1193 aa8.51□□□□□ -1.05
SMNDC1-205ENST00000477763 MBIPQ9NS73 344 aa8.51□□□□□ -1.05
SMNDC1-205ENST00000477763 TGFBR3LH3BV60 316 aa8.5□□□□□ -1.05
SMNDC1-205ENST00000477763 EFSO43281 561 aa8.5□□□□□ -1.05
SMNDC1-205ENST00000477763 TNP2Q05952 138 aa8.5□□□□□ -1.05
SMNDC1-205ENST00000477763 C16orf46Q6P387 395 aa8.5□□□□□ -1.05
SMNDC1-205ENST00000477763 KLRG1Q96E93 195 aa8.5□□□□□ -1.05
SMNDC1-205ENST00000477763 ABHD17AQ96GS6 310 aa8.5□□□□□ -1.05
SMNDC1-205ENST00000477763 CARNS1A5YM72 827 aa8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 C11orf91Q3C1V1 193 aa8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 COX20Q5RI15 118 aa8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 ZNF385CQ66K41 422 aaPredicted RBP8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 PHLDB3Q6NSJ2 640 aa8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 ZNF280CQ8ND82 737 aa8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 HSH2DQ96JZ2 352 aa8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 ADAMTS8Q9UP79 889 aa8.49□□□□□ -1.05
SMNDC1-205ENST00000477763 MAPTP10636 758 aaKnown RBP8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 MX2P20592 715 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 FGFR3P22607 806 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 SRSF11Q05519 484 aaKnown RBP8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 DGKZQ13574 1117 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 FAM182BQ5T319 152 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 WHAMMQ8TF30 809 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 MKNK1Q9BUB5 465 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 LRFN2Q9ULH4 789 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 NSFL1CQ9UNZ2 370 aaKnown RBP8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 BCS1LQ9Y276 419 aa8.48□□□□□ -1.05
SMNDC1-205ENST00000477763 KHNYNO15037 678 aaKnown RBP8.47□□□□□ -1.05
SMNDC1-205ENST00000477763 TYRO3Q06418 890 aa8.47□□□□□ -1.05
SMNDC1-205ENST00000477763 CAPN12Q6ZSI9 719 aa8.47□□□□□ -1.05
SMNDC1-205ENST00000477763 BTLAQ7Z6A9 289 aa8.47□□□□□ -1.05
SMNDC1-205ENST00000477763 KLK14Q9P0G3 267 aa8.47□□□□□ -1.05
SMNDC1-205ENST00000477763 DMGDHQ9UI17 866 aaKnown RBP8.47□□□□□ -1.05
SMNDC1-205ENST00000477763 MTMR7Q9Y216 660 aa8.47□□□□□ -1.05
SMNDC1-205ENST00000477763 DCDC2BA2VCK2 349 aa8.46□□□□□ -1.06
SMNDC1-205ENST00000477763 SLURP2P0DP57 97 aa8.46□□□□□ -1.06
SMNDC1-205ENST00000477763 MAP2K3P46734 347 aa8.46□□□□□ -1.06
SMNDC1-205ENST00000477763 KCNQ4P56696 695 aa8.46□□□□□ -1.06
SMNDC1-205ENST00000477763 KCTD17Q8N5Z5 321 aa8.46□□□□□ -1.06
SMNDC1-205ENST00000477763 SAP130Q9H0E3 1048 aa8.46□□□□□ -1.06
SMNDC1-205ENST00000477763 BRD2P25440 801 aaKnown RBP8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 NAA30Q147X3 362 aaPredicted RBP8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 IFT43Q96FT9 208 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 CEP63Q96MT8 703 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 TRAIPQ9BWF2 469 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 BRD7Q9NPI1 651 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 MARK1Q9P0L2 795 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 SEPT3Q9UH03 358 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 HCN2Q9UL51 889 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 IGF1RP08069 1367 aa8.45□□□□□ -1.06
SMNDC1-205ENST00000477763 TNFRSF10BO14763 440 aa8.44□□□□□ -1.06
SMNDC1-205ENST00000477763 ARHGEF15O94989 841 aa8.44□□□□□ -1.06
SMNDC1-205ENST00000477763 LOC100996750A0A140TA64 210 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 MICAL2O94851 1124 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 ADAMTS2O95450 1211 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 BMP4P12644 408 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 CTBSQ01459 385 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 RASSF7Q02833 373 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 HELQQ8TDG4 1101 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 KRTAP4-6Q9BYQ5 205 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 C11orf16Q9NQ32 467 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 STIM2Q9P246 746 aa8.43□□□□□ -1.06
SMNDC1-205ENST00000477763 EPB42P16452 691 aa8.42□□□□□ -1.06
SMNDC1-205ENST00000477763 CD33P20138 364 aa8.42□□□□□ -1.06
SMNDC1-205ENST00000477763 ARID4AP29374 1257 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms