RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 BTG4Q9NY30 223 aa9.84□□□□□ -0.83
VMA21-203ENST00000477649 DAXXQ9UER7 740 aaPredicted RBP9.84□□□□□ -0.83
VMA21-203ENST00000477649 NOP58Q9Y2X3 529 aaKnown RBP9.84□□□□□ -0.83
VMA21-203ENST00000477649 UTYO14607 1347 aa9.83□□□□□ -0.84
VMA21-203ENST00000477649 UBAP1LF5GYI3 381 aa9.83□□□□□ -0.84
VMA21-203ENST00000477649 SSH3Q8TE77 659 aa9.83□□□□□ -0.84
VMA21-203ENST00000477649 ZNF496Q96IT1 587 aaPredicted RBP9.83□□□□□ -0.84
VMA21-203ENST00000477649 OSBPL3Q9H4L5 887 aa9.83□□□□□ -0.84
VMA21-203ENST00000477649 VIRMAQ69YN4 1812 aaKnown RBP9.83□□□□□ -0.84
VMA21-203ENST00000477649 ADCY9O60503 1353 aa9.83□□□□□ -0.84
VMA21-203ENST00000477649 AOX1Q06278 1338 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 DISP2A7MBM2 1401 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 TNS2Q63HR2 1409 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 LRP6O75581 1613 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 BECN1Q14457 450 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 PDIA6Q15084 440 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 CASC1Q6TDU7 716 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 SLAIN1Q8ND83 568 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 LRRCC1Q9C099 1032 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 TRPC6Q9Y210 931 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 MAP3K2Q9Y2U5 619 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 COL15A1P39059 1388 aa9.82□□□□□ -0.84
VMA21-203ENST00000477649 PLCH1Q4KWH8 1693 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 EXOC5O00471 708 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 TIE1P35590 1138 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 SLC39A6Q13433 755 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 RIC3Q7Z5B4 369 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 NPM2Q86SE8 214 aaKnown RBP9.81□□□□□ -0.84
VMA21-203ENST00000477649 ERC1Q8IUD2 1116 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 PLEKHM2Q8IWE5 1019 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 IL27Q8NEV9 243 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 TBC1D32Q96NH3 1257 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 METTL22Q9BUU2 404 aaPredicted RBP9.81□□□□□ -0.84
VMA21-203ENST00000477649 TMOD3Q9NYL9 352 aa9.81□□□□□ -0.84
VMA21-203ENST00000477649 C9orf78Q9NZ63 289 aaPredicted RBP9.81□□□□□ -0.84
VMA21-203ENST00000477649 LRRFIP2Q9Y608 721 aaKnown RBP9.81□□□□□ -0.84
VMA21-203ENST00000477649 GRM8O00222 908 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 CDC45O75419 566 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 SEC24BO95487 1268 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 HSPA1LP34931 641 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 TTC22Q5TAA0 569 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 ANKRD13DQ6ZTN6 518 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 PLBD2Q8NHP8 589 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 DDX54Q8TDD1 881 aaKnown RBP9.8□□□□□ -0.84
VMA21-203ENST00000477649 KIF12Q96FN5 646 aa9.8□□□□□ -0.84
VMA21-203ENST00000477649 TMEM121BQ9BXQ6 578 aaPredicted RBP9.8□□□□□ -0.84
VMA21-203ENST00000477649 COL16A1Q07092 1604 aaPredicted RBP9.8□□□□□ -0.84
VMA21-203ENST00000477649 PHLPP1O60346 1717 aa9.79□□□□□ -0.84
VMA21-203ENST00000477649 LAMB4A4D0S4 1761 aa9.79□□□□□ -0.84
VMA21-203ENST00000477649 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
VMA21-203ENST00000477649 COPS6Q7L5N1 327 aa9.79□□□□□ -0.84
VMA21-203ENST00000477649 KIF1BPQ96EK5 621 aa9.79□□□□□ -0.84
VMA21-203ENST00000477649 PAPPAQ13219 1627 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 SRGAP3O43295 1099 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 STARD3NLO95772 234 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 PROSER3Q2NL68 480 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 LRP10Q7Z4F1 713 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 PPP1R42Q7Z4L9 355 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 XAGE3Q8WTP9 111 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 STAP2Q9UGK3 403 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 USP16Q9Y5T5 823 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 SPATA31A1Q5TZJ5 1347 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 UBR2Q8IWV8 1755 aa9.78□□□□□ -0.84
VMA21-203ENST00000477649 KCPQ6ZWJ8 1503 aa9.77□□□□□ -0.84
VMA21-203ENST00000477649 JCADQ9P266 1359 aa9.77□□□□□ -0.84
VMA21-203ENST00000477649 PNMA6EA0A0J9YXQ4 647 aa9.77□□□□□ -0.85
VMA21-203ENST00000477649 NEURL1BA8MQ27 555 aa9.77□□□□□ -0.85
VMA21-203ENST00000477649 EPB41L2O43491 1005 aaKnown RBP9.77□□□□□ -0.85
VMA21-203ENST00000477649 NBPF7P0C2Y1 421 aaPredicted RBP9.77□□□□□ -0.85
VMA21-203ENST00000477649 RBM25P49756 843 aaKnown RBP9.77□□□□□ -0.85
VMA21-203ENST00000477649 GCKRQ14397 625 aa9.77□□□□□ -0.85
VMA21-203ENST00000477649 C22orf23Q9BZE7 217 aa9.77□□□□□ -0.85
VMA21-203ENST00000477649 NWD2Q9ULI1 1742 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 PRAMEF22A3QJZ6 481 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 SURF6O75683 361 aaKnown RBP9.76□□□□□ -0.85
VMA21-203ENST00000477649 ANXA1P04083 346 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 MYL6BP14649 208 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 PDE1AP54750 535 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 PIP4K2BP78356 416 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 SPATA31A6Q5VVP1 1343 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 SLIT2O94813 1529 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 SHANK3Q9BYB0 1731 aa9.76□□□□□ -0.85
VMA21-203ENST00000477649 GLI3P10071 1580 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 BCL9O00512 1426 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 C5P01031 1676 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 REC8O95072 547 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 IGKV5-2P06315 115 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 MX1P20591 662 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 AIMP1Q12904 312 aaKnown RBP9.75□□□□□ -0.85
VMA21-203ENST00000477649 TRIM28Q13263 835 aaKnown RBP9.75□□□□□ -0.85
VMA21-203ENST00000477649 DDB1Q16531 1140 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 HSP90AB3PQ58FF7 597 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 CLASRPQ8N2M8 674 aaKnown RBP9.75□□□□□ -0.85
VMA21-203ENST00000477649 CCDC191Q8NCU4 936 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 RHPN1Q8TCX5 695 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 GPATCH3Q96I76 525 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 ANP32EQ9BTT0 268 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 TSPYL2Q9H2G4 693 aaPredicted RBP9.75□□□□□ -0.85
VMA21-203ENST00000477649 EXOC6BQ9Y2D4 811 aa9.75□□□□□ -0.85
VMA21-203ENST00000477649 SPATA31A5Q5VU36 1347 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms