RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 NDFIP2Q9NV92 336 aa7.43□□□□□ -1.22
PDZRN3-206ENST00000477434 ATXN7L1Q9ULK2 861 aaPredicted RBP7.43□□□□□ -1.22
PDZRN3-206ENST00000477434 NOVA2Q9UNW9 492 aaKnown RBP7.43□□□□□ -1.22
PDZRN3-206ENST00000477434 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 ADAMTS2O95450 1211 aa7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 MX2P20592 715 aa7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 SH3PXD2AQ5TCZ1 1133 aa7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 C1orf53Q5VUE5 145 aa7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 BICDL1Q6ZP65 573 aa7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 SCG3Q8WXD2 468 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 ZCCHC2Q9C0B9 1178 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 NSFL1CQ9UNZ2 370 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 PCDHGC4Q9Y5F7 938 aa7.42□□□□□ -1.22
PDZRN3-206ENST00000477434 BNIP3LO60238 219 aa7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 ATG7O95352 703 aa7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 IGFBP4P22692 258 aa7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 C7orf43Q8WVR3 580 aa7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 PBXIP1Q96AQ6 731 aa7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 C2orf49Q9BVC5 232 aaPredicted RBP7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 GJA3Q9Y6H8 435 aa7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 IGF1RP08069 1367 aa7.41□□□□□ -1.22
PDZRN3-206ENST00000477434 ATXN7O15265 892 aaPredicted RBP7.4□□□□□ -1.22
PDZRN3-206ENST00000477434 SAMD5Q5TGI4 173 aa7.4□□□□□ -1.22
PDZRN3-206ENST00000477434 CCDC82Q8N4S0 544 aa7.4□□□□□ -1.22
PDZRN3-206ENST00000477434 ABHD17AQ96GS6 310 aa7.4□□□□□ -1.22
PDZRN3-206ENST00000477434 HCN4Q9Y3Q4 1203 aa7.4□□□□□ -1.22
PDZRN3-206ENST00000477434 WDR62O43379 1518 aa7.4□□□□□ -1.22
PDZRN3-206ENST00000477434 ACIN1Q9UKV3 1341 aaKnown RBP7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 FAM157BP0CG42 384 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 FGFR3P22607 806 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 MAP2K3P46734 347 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 SWI5Q1ZZU3 235 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 ZNF385CQ66K41 422 aaPredicted RBP7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 RHPN1Q8TCX5 695 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 CHMP7Q8WUX9 453 aaPredicted RBP7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 PHACTR1Q9C0D0 580 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 C1orf115Q9H7X2 142 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 ZMIZ1Q9ULJ6 1067 aa7.39□□□□□ -1.23
PDZRN3-206ENST00000477434 WEE1P30291 646 aa7.38□□□□□ -1.23
PDZRN3-206ENST00000477434 ALDH16A1Q8IZ83 802 aa7.38□□□□□ -1.23
PDZRN3-206ENST00000477434 SVOPQ8N4V2 548 aa7.38□□□□□ -1.23
PDZRN3-206ENST00000477434 MRC2Q9UBG0 1479 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 CADPSQ9ULU8 1353 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 FOXO3O43524 673 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 LGR5O75473 907 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 MAPTP10636 758 aaKnown RBP7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 TNP2Q05952 138 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 LRRC69Q6ZNQ3 347 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 WHAMMQ8TF30 809 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 NEUROD4Q9HD90 331 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 ANKIB1Q9P2G1 1089 aa7.37□□□□□ -1.23
PDZRN3-206ENST00000477434 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 KHNYNO15037 678 aaKnown RBP7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 CELA2BP08218 269 aaPredicted RBP7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 LAMC2Q13753 1193 aa7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 HIF1AQ16665 826 aa7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 FAM182BQ5T319 152 aa7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 LYPD4Q6UWN0 246 aa7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 STK32AQ8WU08 396 aa7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 LRRC4BQ9NT99 713 aa7.36□□□□□ -1.23
PDZRN3-206ENST00000477434 EFSO43281 561 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 PPP1R15AO75807 674 aaPredicted RBP7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 ARHGEF15O94989 841 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 BMP4P12644 408 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 CTBSQ01459 385 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 MAP3K10Q02779 954 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 FAM69CQ0P6D2 419 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 RTN1Q16799 776 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 ACDQ96AP0 544 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 KLRG1Q96E93 195 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 OXCT2Q9BYC2 517 aaPredicted RBP7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 RSF1Q96T23 1441 aaPredicted RBP7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 PDS5BQ9NTI5 1447 aa7.35□□□□□ -1.23
PDZRN3-206ENST00000477434 C2CD2LO14523 706 aa7.34□□□□□ -1.23
PDZRN3-206ENST00000477434 BCRP11274 1271 aa7.34□□□□□ -1.23
PDZRN3-206ENST00000477434 TMEM164Q5U3C3 297 aa7.34□□□□□ -1.23
PDZRN3-206ENST00000477434 NGLY1Q96IV0 654 aa7.34□□□□□ -1.23
PDZRN3-206ENST00000477434 SUSD3Q96L08 255 aa7.34□□□□□ -1.23
PDZRN3-206ENST00000477434 GDF2Q9UK05 429 aaPredicted RBP7.34□□□□□ -1.23
PDZRN3-206ENST00000477434 HCN2Q9UL51 889 aa7.34□□□□□ -1.23
PDZRN3-206ENST00000477434 URB2Q14146 1524 aaKnown RBP7.33□□□□□ -1.24
PDZRN3-206ENST00000477434 VTI1AQ96AJ9 217 aa7.33□□□□□ -1.24
PDZRN3-206ENST00000477434 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
PDZRN3-206ENST00000477434 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDZRN3-206ENST00000477434 ENAMQ9NRM1 1142 aa7.33□□□□□ -1.24
PDZRN3-206ENST00000477434 MARK1Q9P0L2 795 aa7.33□□□□□ -1.24
PDZRN3-206ENST00000477434 ARHGEF11O15085 1522 aa7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 FANCD2Q9BXW9 1451 aa7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 CD33P20138 364 aa7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 OCLNQ16625 522 aa7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 GOLGA6L1Q8N7Z2 621 aa7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 ZNF280CQ8ND82 737 aa7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 AVENQ9NQS1 362 aaPredicted RBP7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 ADAMTS8Q9UP79 889 aa7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 TOP2AP11388 1531 aaKnown RBP7.32□□□□□ -1.24
PDZRN3-206ENST00000477434 CFTRP13569 1480 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 CEP164Q9UPV0 1460 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 OIP5O43482 229 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 PRMT3O60678 531 aa7.31□□□□□ -1.24
PDZRN3-206ENST00000477434 ARAFP10398 606 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms