RNA–Protein interactions for RNA: ENST00000477413.1

CNIH4-208, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 5

Gene CNIH4, Length 820 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-208ENST00000477413 H0YIN7 160 aa29.67■■■□□ 2.34
CNIH4-208ENST00000477413 ARHGAP27Q6ZUM4 889 aa29.67■■■□□ 2.34
CNIH4-208ENST00000477413 LRP10Q7Z4F1 713 aa29.67■■■□□ 2.34
CNIH4-208ENST00000477413 C2CD5Q86YS7 1000 aa29.67■■■□□ 2.34
CNIH4-208ENST00000477413 TTLL6Q8N841 843 aa29.66■■■□□ 2.34
CNIH4-208ENST00000477413 IBTKQ9P2D0 1353 aaPredicted RBP29.65■■■□□ 2.34
CNIH4-208ENST00000477413 MAP3K15Q6ZN16 1313 aa29.65■■■□□ 2.34
CNIH4-208ENST00000477413 ST5P78524 1137 aa29.64■■■□□ 2.34
CNIH4-208ENST00000477413 FER1L6Q2WGJ9 1857 aa29.63■■■□□ 2.33
CNIH4-208ENST00000477413 C1QTNF8P60827 252 aa29.63■■■□□ 2.33
CNIH4-208ENST00000477413 GPBP1L1Q9HC44 474 aaPredicted RBP29.63■■■□□ 2.33
CNIH4-208ENST00000477413 RIC1Q4ADV7 1423 aa29.62■■■□□ 2.33
CNIH4-208ENST00000477413 KLRG2A4D1S0 409 aaPredicted RBP29.62■■■□□ 2.33
CNIH4-208ENST00000477413 ZNF316A6NFI3 1004 aaPredicted RBP29.62■■■□□ 2.33
CNIH4-208ENST00000477413 PDIA6Q15084 440 aa29.62■■■□□ 2.33
CNIH4-208ENST00000477413 HLFQ16534 295 aa29.62■■■□□ 2.33
CNIH4-208ENST00000477413 NBPF5PQ86XG9 351 aaPredicted RBP29.62■■■□□ 2.33
CNIH4-208ENST00000477413 NIP7Q9Y221 180 aaKnown RBP eCLIP29.62■■■□□ 2.33
CNIH4-208ENST00000477413 NEUROD2Q15784 382 aa29.61■■■□□ 2.33
CNIH4-208ENST00000477413 HOXB7P09629 217 aa29.6■■■□□ 2.33
CNIH4-208ENST00000477413 STYK1Q6J9G0 422 aa29.6■■■□□ 2.33
CNIH4-208ENST00000477413 ZC3H4Q9UPT8 1303 aaKnown RBP29.6■■■□□ 2.33
CNIH4-208ENST00000477413 ANKRD36CQ5JPF3 1778 aa29.59■■■□□ 2.33
CNIH4-208ENST00000477413 SRGNP10124 158 aa29.59■■■□□ 2.33
CNIH4-208ENST00000477413 KIF6Q6ZMV9 814 aa29.59■■■□□ 2.33
CNIH4-208ENST00000477413 TTLL7Q6ZT98 887 aa29.59■■■□□ 2.33
CNIH4-208ENST00000477413 TNRC6CQ9HCJ0 1690 aaKnown RBP29.59■■■□□ 2.33
CNIH4-208ENST00000477413 SLX4Q8IY92 1834 aa29.59■■■□□ 2.33
CNIH4-208ENST00000477413 CACNA1SQ13698 1873 aa29.59■■■□□ 2.33
CNIH4-208ENST00000477413 C9orf131Q5VYM1 1079 aa29.58■■■□□ 2.33
CNIH4-208ENST00000477413 TPTE2Q6XPS3 522 aa29.58■■■□□ 2.33
CNIH4-208ENST00000477413 CFAP44Q96MT7 982 aa29.58■■■□□ 2.33
CNIH4-208ENST00000477413 TIAM2Q8IVF5 1701 aa29.57■■■□□ 2.32
CNIH4-208ENST00000477413 ZNF853P0CG23 659 aa29.56■■■□□ 2.32
CNIH4-208ENST00000477413 MYL6BP14649 208 aa29.56■■■□□ 2.32
CNIH4-208ENST00000477413 CCDC24Q8N4L8 307 aa29.56■■■□□ 2.32
CNIH4-208ENST00000477413 DICER1Q9UPY3 1922 aaKnown RBP29.55■■■□□ 2.32
CNIH4-208ENST00000477413 APAF1O14727 1248 aa29.55■■■□□ 2.32
CNIH4-208ENST00000477413 NPHP1O15259 732 aa29.55■■■□□ 2.32
CNIH4-208ENST00000477413 GIGYF2Q6Y7W6 1299 aaKnown RBP29.55■■■□□ 2.32
CNIH4-208ENST00000477413 CNKSR1Q969H4 720 aa29.55■■■□□ 2.32
CNIH4-208ENST00000477413 MASTLQ96GX5 879 aa29.55■■■□□ 2.32
CNIH4-208ENST00000477413 NYXQ9GZU5 481 aa29.54■■■□□ 2.32
CNIH4-208ENST00000477413 CCDC88AQ3V6T2 1871 aa29.54■■■□□ 2.32
CNIH4-208ENST00000477413 UBN2Q6ZU65 1347 aa29.53■■■□□ 2.32
CNIH4-208ENST00000477413 LTBP3Q9NS15 1303 aa29.53■■■□□ 2.32
CNIH4-208ENST00000477413 NFKBIEO00221 500 aa29.53■■■□□ 2.32
CNIH4-208ENST00000477413 CCDC184Q52MB2 194 aa29.53■■■□□ 2.32
CNIH4-208ENST00000477413 ZNF34Q8IZ26 560 aa29.53■■■□□ 2.32
CNIH4-208ENST00000477413 CALD1Q05682 793 aaKnown RBP29.52■■■□□ 2.32
CNIH4-208ENST00000477413 PROSER3Q2NL68 480 aa29.52■■■□□ 2.32
CNIH4-208ENST00000477413 NGEFQ8N5V2 710 aa29.52■■■□□ 2.32
CNIH4-208ENST00000477413 ZNF622Q969S3 477 aaKnown RBP eCLIP29.52■■■□□ 2.32
CNIH4-208ENST00000477413 IFT57Q9NWB7 429 aa29.52■■■□□ 2.32
CNIH4-208ENST00000477413 RNF181Q9P0P0 153 aa29.52■■■□□ 2.32
CNIH4-208ENST00000477413 ABCC12Q96J65 1359 aa29.52■■■□□ 2.32
CNIH4-208ENST00000477413 KIF3CO14782 793 aa29.51■■■□□ 2.31
CNIH4-208ENST00000477413 EIF2S2P20042 333 aaKnown RBP29.51■■■□□ 2.31
CNIH4-208ENST00000477413 LMNB1P20700 586 aa29.51■■■□□ 2.31
CNIH4-208ENST00000477413 RASSF7Q02833 373 aa29.51■■■□□ 2.31
CNIH4-208ENST00000477413 KRT24Q2M2I5 525 aa29.51■■■□□ 2.31
CNIH4-208ENST00000477413 CRY2Q49AN0 593 aa29.51■■■□□ 2.31
CNIH4-208ENST00000477413 ZBTB3Q9H5J0 574 aa29.51■■■□□ 2.31
CNIH4-208ENST00000477413 DDX21Q9NR30 783 aaKnown RBP eCLIP29.51■■■□□ 2.31
CNIH4-208ENST00000477413 NPR1P16066 1061 aa29.5■■■□□ 2.31
CNIH4-208ENST00000477413 PRELPP51888 382 aa29.5■■■□□ 2.31
CNIH4-208ENST00000477413 PRPF40BQ6NWY9 871 aaKnown RBP29.5■■■□□ 2.31
CNIH4-208ENST00000477413 ZNF526Q8TF50 670 aaPredicted RBP29.5■■■□□ 2.31
CNIH4-208ENST00000477413 NCBP3Q53F19 620 aaKnown RBP29.49■■■□□ 2.31
CNIH4-208ENST00000477413 SOGA3Q5TF21 947 aa29.49■■■□□ 2.31
CNIH4-208ENST00000477413 MBIPQ9NS73 344 aa29.49■■■□□ 2.31
CNIH4-208ENST00000477413 PARP10Q53GL7 1025 aa29.48■■■□□ 2.31
CNIH4-208ENST00000477413 C7orf43Q8WVR3 580 aa29.48■■■□□ 2.31
CNIH4-208ENST00000477413 RNF123Q5XPI4 1314 aa29.47■■■□□ 2.31
CNIH4-208ENST00000477413 NTSR2O95665 410 aa29.47■■■□□ 2.31
CNIH4-208ENST00000477413 CCDC27Q2M243 656 aa29.47■■■□□ 2.31
CNIH4-208ENST00000477413 GNAI1P63096 354 aa29.46■■■□□ 2.31
CNIH4-208ENST00000477413 LAS1LQ9Y4W2 734 aaKnown RBP29.46■■■□□ 2.31
CNIH4-208ENST00000477413 ANP32CO43423 234 aa29.45■■■□□ 2.31
CNIH4-208ENST00000477413 C21orf2O43822 256 aa29.45■■■□□ 2.31
CNIH4-208ENST00000477413 ANXA1P04083 346 aa29.45■■■□□ 2.31
CNIH4-208ENST00000477413 HDGFL1Q5TGJ6 251 aa29.45■■■□□ 2.31
CNIH4-208ENST00000477413 SNED1Q8TER0 1413 aa29.45■■■□□ 2.3
CNIH4-208ENST00000477413 SUSD4Q5VX71 490 aa29.44■■■□□ 2.3
CNIH4-208ENST00000477413 CHPF2Q9P2E5 772 aa29.44■■■□□ 2.3
CNIH4-208ENST00000477413 KDM2BQ8NHM5 1336 aa29.44■■■□□ 2.3
CNIH4-208ENST00000477413 GPTP24298 496 aa29.43■■■□□ 2.3
CNIH4-208ENST00000477413 HSP90AB3PQ58FF7 597 aa29.43■■■□□ 2.3
CNIH4-208ENST00000477413 DUSP27Q5VZP5 1158 aa29.43■■■□□ 2.3
CNIH4-208ENST00000477413 COPS6Q7L5N1 327 aa29.43■■■□□ 2.3
CNIH4-208ENST00000477413 XAGE3Q8WTP9 111 aa29.43■■■□□ 2.3
CNIH4-208ENST00000477413 DBF4Q9UBU7 674 aaPredicted RBP29.43■■■□□ 2.3
CNIH4-208ENST00000477413 ERFEQ4G0M1 354 aa29.42■■■□□ 2.3
CNIH4-208ENST00000477413 CEP350Q5VT06 3117 aa29.41■■■□□ 2.3
CNIH4-208ENST00000477413 FAM177BA6PVY3 158 aa29.41■■■□□ 2.3
CNIH4-208ENST00000477413 GTF2E1P29083 439 aaPredicted RBP29.41■■■□□ 2.3
CNIH4-208ENST00000477413 PPP1R42Q7Z4L9 355 aa29.41■■■□□ 2.3
CNIH4-208ENST00000477413 NUTM1Q86Y26 1132 aa29.41■■■□□ 2.3
CNIH4-208ENST00000477413 TAOK3Q9H2K8 898 aa29.41■■■□□ 2.3
CNIH4-208ENST00000477413 LAMB2P55268 1798 aa29.4■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms