RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
ACTN4-205ENST00000477174 TTLL7Q6ZT98 887 aa17.42■□□□□ 0.38
ACTN4-205ENST00000477174 SENP3-EIF4A1A0A087X0R7 540 aa17.41■□□□□ 0.38
ACTN4-205ENST00000477174 KCNA3P22001 575 aa17.41■□□□□ 0.38
ACTN4-205ENST00000477174 BRIP1Q9BX63 1249 aa17.41■□□□□ 0.38
ACTN4-205ENST00000477174 PIM2Q9P1W9 311 aa17.41■□□□□ 0.38
ACTN4-205ENST00000477174 DBF4Q9UBU7 674 aaPredicted RBP17.41■□□□□ 0.38
ACTN4-205ENST00000477174 NIP7Q9Y221 180 aaKnown RBP eCLIP17.41■□□□□ 0.38
ACTN4-205ENST00000477174 PXDNLA1KZ92 1463 aa17.4■□□□□ 0.38
ACTN4-205ENST00000477174 PROSER3Q2NL68 480 aa17.4■□□□□ 0.38
ACTN4-205ENST00000477174 TPTE2Q6XPS3 522 aa17.4■□□□□ 0.38
ACTN4-205ENST00000477174 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
ACTN4-205ENST00000477174 PDZRN3Q9UPQ7 1066 aa17.4■□□□□ 0.38
ACTN4-205ENST00000477174 PRR5LQ6MZQ0 368 aa17.39■□□□□ 0.37
ACTN4-205ENST00000477174 GIGYF2Q6Y7W6 1299 aaKnown RBP17.39■□□□□ 0.37
ACTN4-205ENST00000477174 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
ACTN4-205ENST00000477174 NBPF5PQ86XG9 351 aaPredicted RBP17.39■□□□□ 0.37
ACTN4-205ENST00000477174 CNBD1Q8NA66 436 aa17.39■□□□□ 0.37
ACTN4-205ENST00000477174 C8orf58Q8NAV2 365 aa17.39■□□□□ 0.37
ACTN4-205ENST00000477174 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
ACTN4-205ENST00000477174 H0YIN7 160 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 ELL2O00472 640 aaPredicted RBP17.38■□□□□ 0.37
ACTN4-205ENST00000477174 NPHP1O15259 732 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 ANXA1P04083 346 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 YY1P25490 414 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 PDE6BP35913 854 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 DIEXFQ68CQ4 756 aaKnown RBP17.38■□□□□ 0.37
ACTN4-205ENST00000477174 ZBTB3Q9H5J0 574 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 LAMB4A4D0S4 1761 aa17.38■□□□□ 0.37
ACTN4-205ENST00000477174 CHRNA5P30532 468 aa17.37■□□□□ 0.37
ACTN4-205ENST00000477174 ST5P78524 1137 aa17.37■□□□□ 0.37
ACTN4-205ENST00000477174 DALRD3Q5D0E6 543 aaKnown RBP17.37■□□□□ 0.37
ACTN4-205ENST00000477174 XAGE3Q8WTP9 111 aa17.37■□□□□ 0.37
ACTN4-205ENST00000477174 WWC3Q9ULE0 1092 aa17.37■□□□□ 0.37
ACTN4-205ENST00000477174 BCS1LQ9Y276 419 aa17.37■□□□□ 0.37
ACTN4-205ENST00000477174 KIF13BQ9NQT8 1826 aa17.37■□□□□ 0.37
ACTN4-205ENST00000477174 AIMP1Q12904 312 aaKnown RBP17.36■□□□□ 0.37
ACTN4-205ENST00000477174 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
ACTN4-205ENST00000477174 ZNF34Q8IZ26 560 aa17.36■□□□□ 0.37
ACTN4-205ENST00000477174 TSR2Q969E8 191 aaKnown RBP17.36■□□□□ 0.37
ACTN4-205ENST00000477174 CCDC30Q5VVM6 783 aa17.35■□□□□ 0.37
ACTN4-205ENST00000477174 NYXQ9GZU5 481 aa17.35■□□□□ 0.37
ACTN4-205ENST00000477174 SCN7AQ01118 1682 aa17.35■□□□□ 0.37
ACTN4-205ENST00000477174 GTF2E1P29083 439 aaPredicted RBP17.34■□□□□ 0.37
ACTN4-205ENST00000477174 PARP10Q53GL7 1025 aa17.34■□□□□ 0.37
ACTN4-205ENST00000477174 HSP90AB3PQ58FF7 597 aa17.34■□□□□ 0.37
ACTN4-205ENST00000477174 ANKRD13DQ6ZTN6 518 aa17.34■□□□□ 0.37
ACTN4-205ENST00000477174 TSPYL6Q8N831 410 aa17.34■□□□□ 0.37
ACTN4-205ENST00000477174 ATP10DQ9P241 1426 aa17.34■□□□□ 0.37
ACTN4-205ENST00000477174 NRXN2Q9P2S2 1712 aa17.33■□□□□ 0.37
ACTN4-205ENST00000477174 GOLGA2Q08379 1002 aa17.33■□□□□ 0.36
ACTN4-205ENST00000477174 CCDC24Q8N4L8 307 aa17.33■□□□□ 0.36
ACTN4-205ENST00000477174 TTLL6Q8N841 843 aa17.33■□□□□ 0.36
ACTN4-205ENST00000477174 PLBD2Q8NHP8 589 aa17.33■□□□□ 0.36
ACTN4-205ENST00000477174 MYH16Q9H6N6 1097 aa17.33■□□□□ 0.36
ACTN4-205ENST00000477174 KLRG2A4D1S0 409 aaPredicted RBP17.32■□□□□ 0.36
ACTN4-205ENST00000477174 FAM177BA6PVY3 158 aa17.32■□□□□ 0.36
ACTN4-205ENST00000477174 GPTP24298 496 aa17.32■□□□□ 0.36
ACTN4-205ENST00000477174 TCIRG1Q13488 830 aa17.32■□□□□ 0.36
ACTN4-205ENST00000477174 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
ACTN4-205ENST00000477174 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
ACTN4-205ENST00000477174 FANCIQ9NVI1 1328 aa17.31■□□□□ 0.36
ACTN4-205ENST00000477174 SRGNP10124 158 aa17.31■□□□□ 0.36
ACTN4-205ENST00000477174 SUSD4Q5VX71 490 aa17.31■□□□□ 0.36
ACTN4-205ENST00000477174 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
ACTN4-205ENST00000477174 BCORQ6W2J9 1755 aa17.3■□□□□ 0.36
ACTN4-205ENST00000477174 UBN2Q6ZU65 1347 aa17.3■□□□□ 0.36
ACTN4-205ENST00000477174 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
ACTN4-205ENST00000477174 STYK1Q6J9G0 422 aa17.3■□□□□ 0.36
ACTN4-205ENST00000477174 MIER1Q8N108 512 aa17.3■□□□□ 0.36
ACTN4-205ENST00000477174 ZNF622Q969S3 477 aaKnown RBP eCLIP17.3■□□□□ 0.36
ACTN4-205ENST00000477174 SPINK5Q9NQ38 1064 aaPredicted RBP17.3■□□□□ 0.36
ACTN4-205ENST00000477174 AFDNP55196 1824 aaKnown RBP17.3■□□□□ 0.36
ACTN4-205ENST00000477174 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
ACTN4-205ENST00000477174 CNKSR1Q969H4 720 aa17.29■□□□□ 0.36
ACTN4-205ENST00000477174 MASTLQ96GX5 879 aa17.29■□□□□ 0.36
ACTN4-205ENST00000477174 UTP14AQ9BVJ6 771 aaKnown RBP17.29■□□□□ 0.36
ACTN4-205ENST00000477174 STK31Q9BXU1 1019 aa17.29■□□□□ 0.36
ACTN4-205ENST00000477174 KIAA1551Q9HCM1 1747 aa17.28■□□□□ 0.36
ACTN4-205ENST00000477174 VAMP4O75379 141 aa17.28■□□□□ 0.36
ACTN4-205ENST00000477174 NPR1P16066 1061 aa17.28■□□□□ 0.36
ACTN4-205ENST00000477174 ERFEQ4G0M1 354 aa17.28■□□□□ 0.36
ACTN4-205ENST00000477174 SLC10A5Q5PT55 438 aa17.28■□□□□ 0.36
ACTN4-205ENST00000477174 NLRP10Q86W26 655 aa17.28■□□□□ 0.36
ACTN4-205ENST00000477174 NUTM1Q86Y26 1132 aa17.28■□□□□ 0.36
ACTN4-205ENST00000477174 PHAXQ9H814 394 aaKnown RBP17.28■□□□□ 0.36
ACTN4-205ENST00000477174 N4BP2Q86UW6 1770 aaPredicted RBP17.28■□□□□ 0.36
ACTN4-205ENST00000477174 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
ACTN4-205ENST00000477174 NTSR2O95665 410 aa17.27■□□□□ 0.36
ACTN4-205ENST00000477174 DDX58O95786 925 aaKnown RBP17.27■□□□□ 0.36
ACTN4-205ENST00000477174 EXOSC9Q06265 439 aaKnown RBP17.27■□□□□ 0.36
ACTN4-205ENST00000477174 TRIM28Q13263 835 aaKnown RBP17.27■□□□□ 0.36
ACTN4-205ENST00000477174 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
ACTN4-205ENST00000477174 SLC4A2P04920 1241 aa17.26■□□□□ 0.35
ACTN4-205ENST00000477174 CRY2Q49AN0 593 aa17.26■□□□□ 0.35
ACTN4-205ENST00000477174 ALDH1B1P30837 517 aa17.25■□□□□ 0.35
ACTN4-205ENST00000477174 ISCA1Q9BUE6 129 aa17.25■□□□□ 0.35
ACTN4-205ENST00000477174 NUP98P52948 1817 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms