RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 EIF4A1P60842 406 aaKnown RBP22.55■■□□□ 1.2
SMARCD3-210ENST00000477169 BCORQ6W2J9 1755 aa22.55■■□□□ 1.2
SMARCD3-210ENST00000477169 DLEC1Q9Y238 1755 aa22.55■■□□□ 1.2
SMARCD3-210ENST00000477169 KDM3BQ7LBC6 1761 aa22.54■■□□□ 1.2
SMARCD3-210ENST00000477169 NEUROD2Q15784 382 aa22.54■■□□□ 1.2
SMARCD3-210ENST00000477169 CNBD1Q8NA66 436 aa22.54■■□□□ 1.2
SMARCD3-210ENST00000477169 KIF3CO14782 793 aa22.52■■□□□ 1.2
SMARCD3-210ENST00000477169 NPHP1O15259 732 aa22.52■■□□□ 1.2
SMARCD3-210ENST00000477169 ST5P78524 1137 aa22.52■■□□□ 1.2
SMARCD3-210ENST00000477169 CCDC24Q8N4L8 307 aa22.52■■□□□ 1.2
SMARCD3-210ENST00000477169 ANKRD31Q8N7Z5 1873 aa22.51■■□□□ 1.19
SMARCD3-210ENST00000477169 ZNF622Q969S3 477 aaKnown RBP eCLIP22.51■■□□□ 1.19
SMARCD3-210ENST00000477169 RNF181Q9P0P0 153 aa22.51■■□□□ 1.19
SMARCD3-210ENST00000477169 TRIM35Q9UPQ4 493 aa22.51■■□□□ 1.19
SMARCD3-210ENST00000477169 LAMB4A4D0S4 1761 aa22.5■■□□□ 1.19
SMARCD3-210ENST00000477169 SBF1O95248 1867 aa22.5■■□□□ 1.19
SMARCD3-210ENST00000477169 LMOD3Q0VAK6 560 aa22.5■■□□□ 1.19
SMARCD3-210ENST00000477169 NBPF5PQ86XG9 351 aaPredicted RBP22.5■■□□□ 1.19
SMARCD3-210ENST00000477169 BABAM1Q9NWV8 329 aa22.5■■□□□ 1.19
SMARCD3-210ENST00000477169 TSPYL4Q9UJ04 414 aa22.49■■□□□ 1.19
SMARCD3-210ENST00000477169 TPTE2Q6XPS3 522 aa22.48■■□□□ 1.19
SMARCD3-210ENST00000477169 NIP7Q9Y221 180 aaKnown RBP eCLIP22.48■■□□□ 1.19
SMARCD3-210ENST00000477169 HLFQ16534 295 aa22.47■■□□□ 1.19
SMARCD3-210ENST00000477169 ERVV-1B6SEH8 477 aa22.46■■□□□ 1.19
SMARCD3-210ENST00000477169 SRGNP10124 158 aa22.46■■□□□ 1.19
SMARCD3-210ENST00000477169 LMNB1P20700 586 aa22.46■■□□□ 1.19
SMARCD3-210ENST00000477169 RASSF7Q02833 373 aa22.46■■□□□ 1.19
SMARCD3-210ENST00000477169 STYK1Q6J9G0 422 aa22.46■■□□□ 1.19
SMARCD3-210ENST00000477169 NGEFQ8N5V2 710 aa22.46■■□□□ 1.19
SMARCD3-210ENST00000477169 CNKSR1Q969H4 720 aa22.46■■□□□ 1.19
SMARCD3-210ENST00000477169 MASTLQ96GX5 879 aa22.45■■□□□ 1.18
SMARCD3-210ENST00000477169 NMRK2Q9NPI5 230 aa22.45■■□□□ 1.18
SMARCD3-210ENST00000477169 ERBB4Q15303 1308 aa22.45■■□□□ 1.18
SMARCD3-210ENST00000477169 KDM2BQ8NHM5 1336 aa22.45■■□□□ 1.18
SMARCD3-210ENST00000477169 ZC3H4Q9UPT8 1303 aaKnown RBP22.45■■□□□ 1.18
SMARCD3-210ENST00000477169 C21orf2O43822 256 aa22.44■■□□□ 1.18
SMARCD3-210ENST00000477169 TOMM70O94826 608 aa22.44■■□□□ 1.18
SMARCD3-210ENST00000477169 MYL6BP14649 208 aa22.44■■□□□ 1.18
SMARCD3-210ENST00000477169 COL11A2P13942 1736 aaPredicted RBP22.43■■□□□ 1.18
SMARCD3-210ENST00000477169 MAP3K15Q6ZN16 1313 aa22.43■■□□□ 1.18
SMARCD3-210ENST00000477169 KLRG2A4D1S0 409 aaPredicted RBP22.43■■□□□ 1.18
SMARCD3-210ENST00000477169 NFKBIEO00221 500 aa22.43■■□□□ 1.18
SMARCD3-210ENST00000477169 NCBP3Q53F19 620 aaKnown RBP22.43■■□□□ 1.18
SMARCD3-210ENST00000477169 KIF6Q6ZMV9 814 aa22.43■■□□□ 1.18
SMARCD3-210ENST00000477169 HSPA6P17066 643 aa22.42■■□□□ 1.18
SMARCD3-210ENST00000477169 PRELPP51888 382 aa22.42■■□□□ 1.18
SMARCD3-210ENST00000477169 CCDC27Q2M243 656 aa22.42■■□□□ 1.18
SMARCD3-210ENST00000477169 TTLL7Q6ZT98 887 aa22.42■■□□□ 1.18
SMARCD3-210ENST00000477169 ZNF219Q9P2Y4 722 aaPredicted RBP22.41■■□□□ 1.18
SMARCD3-210ENST00000477169 FAM177BA6PVY3 158 aa22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 NPR1P16066 1061 aa22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 GTF2E1P29083 439 aaPredicted RBP22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 SOGA3Q5TF21 947 aa22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 PRPF40BQ6NWY9 871 aaKnown RBP22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 NYXQ9GZU5 481 aa22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 SALL2Q9Y467 1007 aaPredicted RBP22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 NUP98P52948 1817 aa22.4■■□□□ 1.18
SMARCD3-210ENST00000477169 CHL1O00533 1208 aa22.39■■□□□ 1.17
SMARCD3-210ENST00000477169 EIF2S2P20042 333 aaKnown RBP22.39■■□□□ 1.17
SMARCD3-210ENST00000477169 WWC1Q8IX03 1113 aa22.39■■□□□ 1.17
SMARCD3-210ENST00000477169 CCDC88AQ3V6T2 1871 aa22.39■■□□□ 1.17
SMARCD3-210ENST00000477169 SLX4Q8IY92 1834 aa22.38■■□□□ 1.17
SMARCD3-210ENST00000477169 PDIA6Q15084 440 aa22.38■■□□□ 1.17
SMARCD3-210ENST00000477169 ZBTB3Q9H5J0 574 aa22.38■■□□□ 1.17
SMARCD3-210ENST00000477169 RRAGCQ9HB90 399 aa22.38■■□□□ 1.17
SMARCD3-210ENST00000477169 CEP350Q5VT06 3117 aa22.38■■□□□ 1.17
SMARCD3-210ENST00000477169 LTBP3Q9NS15 1303 aa22.37■■□□□ 1.17
SMARCD3-210ENST00000477169 FER1L6Q2WGJ9 1857 aa22.37■■□□□ 1.17
SMARCD3-210ENST00000477169 GLTPD2A6NH11 291 aa22.37■■□□□ 1.17
SMARCD3-210ENST00000477169 GIGYF2Q6Y7W6 1299 aaKnown RBP22.37■■□□□ 1.17
SMARCD3-210ENST00000477169 LRP10Q7Z4F1 713 aa22.37■■□□□ 1.17
SMARCD3-210ENST00000477169 C16orf71Q8IYS4 520 aaPredicted RBP22.37■■□□□ 1.17
SMARCD3-210ENST00000477169 ARFGEF2Q9Y6D5 1785 aa22.36■■□□□ 1.17
SMARCD3-210ENST00000477169 ZNF34Q8IZ26 560 aa22.36■■□□□ 1.17
SMARCD3-210ENST00000477169 RBM46Q8TBY0 533 aaKnown RBP22.36■■□□□ 1.17
SMARCD3-210ENST00000477169 C7orf43Q8WVR3 580 aa22.36■■□□□ 1.17
SMARCD3-210ENST00000477169 TAOK3Q9H2K8 898 aa22.36■■□□□ 1.17
SMARCD3-210ENST00000477169 ALDH1B1P30837 517 aa22.35■■□□□ 1.17
SMARCD3-210ENST00000477169 CALD1Q05682 793 aaKnown RBP22.35■■□□□ 1.17
SMARCD3-210ENST00000477169 LAS1LQ9Y4W2 734 aaKnown RBP22.34■■□□□ 1.17
SMARCD3-210ENST00000477169 CACNA1SQ13698 1873 aa22.34■■□□□ 1.17
SMARCD3-210ENST00000477169 IBTKQ9P2D0 1353 aaPredicted RBP22.34■■□□□ 1.17
SMARCD3-210ENST00000477169 TNRC6CQ9HCJ0 1690 aaKnown RBP22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 ZNF853P0CG23 659 aa22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 GPTP24298 496 aa22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 ERFEQ4G0M1 354 aa22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 SUSD4Q5VX71 490 aa22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 DPY19L2Q6NUT2 758 aa22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 NUTM1Q86Y26 1132 aa22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 CFAP44Q96MT7 982 aa22.33■■□□□ 1.17
SMARCD3-210ENST00000477169 UBN2Q6ZU65 1347 aa22.32■■□□□ 1.16
SMARCD3-210ENST00000477169 DICER1Q9UPY3 1922 aaKnown RBP22.32■■□□□ 1.16
SMARCD3-210ENST00000477169 PROSER3Q2NL68 480 aa22.32■■□□□ 1.16
SMARCD3-210ENST00000477169 CRY2Q49AN0 593 aa22.32■■□□□ 1.16
SMARCD3-210ENST00000477169 PARP10Q53GL7 1025 aa22.32■■□□□ 1.16
SMARCD3-210ENST00000477169 CCDC93Q567U6 631 aa22.32■■□□□ 1.16
SMARCD3-210ENST00000477169 IFT57Q9NWB7 429 aa22.32■■□□□ 1.16
SMARCD3-210ENST00000477169 TIAM2Q8IVF5 1701 aa22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 ANXA1P04083 346 aa22.31■■□□□ 1.16
SMARCD3-210ENST00000477169 VEGFAP15692 232 aaPredicted RBP22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms