RNA–Protein interactions for RNA: ENST00000477057.5

FDPS-211, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-211ENST00000477057 MYH16Q9H6N6 1097 aa16.34■□□□□ 0.21
FDPS-211ENST00000477057 NIP7Q9Y221 180 aaKnown RBP eCLIP16.34■□□□□ 0.21
FDPS-211ENST00000477057 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
FDPS-211ENST00000477057 CARMIL3Q8ND23 1372 aa16.34■□□□□ 0.21
FDPS-211ENST00000477057 TCERG1O14776 1098 aaKnown RBP16.33■□□□□ 0.2
FDPS-211ENST00000477057 TM4SF1P30408 202 aa16.33■□□□□ 0.2
FDPS-211ENST00000477057 GOLGA2Q08379 1002 aa16.33■□□□□ 0.2
FDPS-211ENST00000477057 NCBP3Q53F19 620 aaKnown RBP16.33■□□□□ 0.2
FDPS-211ENST00000477057 CCDC24Q8N4L8 307 aa16.33■□□□□ 0.2
FDPS-211ENST00000477057 XAGE3Q8WTP9 111 aa16.33■□□□□ 0.2
FDPS-211ENST00000477057 DBF4Q9UBU7 674 aaPredicted RBP16.33■□□□□ 0.2
FDPS-211ENST00000477057 MAP3K15Q6ZN16 1313 aa16.33■□□□□ 0.2
FDPS-211ENST00000477057 C10orf71Q711Q0 1435 aa16.33■□□□□ 0.2
FDPS-211ENST00000477057 GPTP24298 496 aa16.32■□□□□ 0.2
FDPS-211ENST00000477057 GTF2E1P29083 439 aaPredicted RBP16.32■□□□□ 0.2
FDPS-211ENST00000477057 HLFQ16534 295 aa16.32■□□□□ 0.2
FDPS-211ENST00000477057 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
FDPS-211ENST00000477057 COPS6Q7L5N1 327 aa16.32■□□□□ 0.2
FDPS-211ENST00000477057 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
FDPS-211ENST00000477057 TSPYL6Q8N831 410 aa16.32■□□□□ 0.2
FDPS-211ENST00000477057 CNBD1Q8NA66 436 aa16.32■□□□□ 0.2
FDPS-211ENST00000477057 DDX21Q9NR30 783 aaKnown RBP eCLIP16.32■□□□□ 0.2
FDPS-211ENST00000477057 ST5P78524 1137 aa16.31■□□□□ 0.2
FDPS-211ENST00000477057 PDIA6Q15084 440 aa16.31■□□□□ 0.2
FDPS-211ENST00000477057 CCDC30Q5VVM6 783 aa16.31■□□□□ 0.2
FDPS-211ENST00000477057 STK31Q9BXU1 1019 aa16.31■□□□□ 0.2
FDPS-211ENST00000477057 A0A0G2JLW4 131 aa16.3■□□□□ 0.2
FDPS-211ENST00000477057 EXOSC9Q06265 439 aaKnown RBP16.3■□□□□ 0.2
FDPS-211ENST00000477057 CLEC4GQ6UXB4 293 aa16.3■□□□□ 0.2
FDPS-211ENST00000477057 CHMP4AQ9BY43 222 aa16.3■□□□□ 0.2
FDPS-211ENST00000477057 AFDNP55196 1824 aaKnown RBP16.29■□□□□ 0.2
FDPS-211ENST00000477057 N4BP2Q86UW6 1770 aaPredicted RBP16.29■□□□□ 0.2
FDPS-211ENST00000477057 ERVV-1B6SEH8 477 aa16.29■□□□□ 0.2
FDPS-211ENST00000477057 SPINK5Q9NQ38 1064 aaPredicted RBP16.29■□□□□ 0.2
FDPS-211ENST00000477057 HYPKQ9NX55 129 aa16.29■□□□□ 0.2
FDPS-211ENST00000477057 PXDNLA1KZ92 1463 aa16.29■□□□□ 0.2
FDPS-211ENST00000477057 DPEP1P16444 411 aa16.28■□□□□ 0.2
FDPS-211ENST00000477057 CHRNA5P30532 468 aa16.28■□□□□ 0.2
FDPS-211ENST00000477057 TGFB2P61812 414 aa16.28■□□□□ 0.2
FDPS-211ENST00000477057 PRR5LQ6MZQ0 368 aa16.28■□□□□ 0.2
FDPS-211ENST00000477057 BCS1LQ9Y276 419 aa16.28■□□□□ 0.2
FDPS-211ENST00000477057 SRCAPQ6ZRS2 3230 aa16.27■□□□□ 0.2
FDPS-211ENST00000477057 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.23e-6■■■□□ 17.5
FDPS-211ENST00000477057 GIGYF2Q6Y7W6 1299 aaKnown RBP16.27■□□□□ 0.2
FDPS-211ENST00000477057 ZNF428Q96B54 188 aa16.27■□□□□ 0.2
FDPS-211ENST00000477057 TPTE2Q6XPS3 522 aa16.26■□□□□ 0.19
FDPS-211ENST00000477057 RIC3Q7Z5B4 369 aa16.26■□□□□ 0.19
FDPS-211ENST00000477057 C2CD5Q86YS7 1000 aa16.26■□□□□ 0.19
FDPS-211ENST00000477057 PHAXQ9H814 394 aaKnown RBP16.26■□□□□ 0.19
FDPS-211ENST00000477057 NUP98P52948 1817 aa16.26■□□□□ 0.19
FDPS-211ENST00000477057 KIF13BQ9NQT8 1826 aa16.26■□□□□ 0.19
FDPS-211ENST00000477057 E9PSI1 815 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 HSP90AB3PQ58FF7 597 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 ANKRD13DQ6ZTN6 518 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 LRP10Q7Z4F1 713 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 ZNF622Q969S3 477 aaKnown RBP eCLIP16.25■□□□□ 0.19
FDPS-211ENST00000477057 NYXQ9GZU5 481 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 ATP10DQ9P241 1426 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
FDPS-211ENST00000477057 ZNF521Q96K83 1311 aa16.24■□□□□ 0.19
FDPS-211ENST00000477057 H0YIN7 160 aa16.24■□□□□ 0.19
FDPS-211ENST00000477057 DDX58O95786 925 aaKnown RBP16.24■□□□□ 0.19
FDPS-211ENST00000477057 YBX3P16989 372 aaKnown RBP eCLIP16.24■□□□□ 0.19
FDPS-211ENST00000477057 PDE6BP35913 854 aa16.24■□□□□ 0.19
FDPS-211ENST00000477057 PPP1R42Q7Z4L9 355 aa16.24■□□□□ 0.19
FDPS-211ENST00000477057 PLBD2Q8NHP8 589 aa16.24■□□□□ 0.19
FDPS-211ENST00000477057 UBN2Q6ZU65 1347 aa16.23■□□□□ 0.19
FDPS-211ENST00000477057 RGL2O15211 777 aa16.23■□□□□ 0.19
FDPS-211ENST00000477057 SLC4A2P04920 1241 aa16.23■□□□□ 0.19
FDPS-211ENST00000477057 PIM2Q9P1W9 311 aa16.23■□□□□ 0.19
FDPS-211ENST00000477057 KIAA1551Q9HCM1 1747 aa16.22■□□□□ 0.19
FDPS-211ENST00000477057 ATP5J2-PTCD1G3V325 749 aa16.22■□□□□ 0.19
FDPS-211ENST00000477057 GRIN3BO60391 1043 aa16.22■□□□□ 0.19
FDPS-211ENST00000477057 PARP10Q53GL7 1025 aa16.22■□□□□ 0.19
FDPS-211ENST00000477057 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
FDPS-211ENST00000477057 SUSD4Q5VX71 490 aa16.22■□□□□ 0.19
FDPS-211ENST00000477057 CDCA7LQ96GN5 454 aa16.22■□□□□ 0.19
FDPS-211ENST00000477057 BRIP1Q9BX63 1249 aa16.22■□□□□ 0.19
FDPS-211ENST00000477057 ANKRD36CQ5JPF3 1778 aa16.21■□□□□ 0.19
FDPS-211ENST00000477057 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
FDPS-211ENST00000477057 ZNF34Q8IZ26 560 aa16.21■□□□□ 0.19
FDPS-211ENST00000477057 MYD88Q99836 296 aa16.21■□□□□ 0.19
FDPS-211ENST00000477057 UTP14AQ9BVJ6 771 aaKnown RBP16.21■□□□□ 0.19
FDPS-211ENST00000477057 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
FDPS-211ENST00000477057 ARFGEF2Q9Y6D5 1785 aa16.21■□□□□ 0.18
FDPS-211ENST00000477057 VAMP4O75379 141 aa16.2■□□□□ 0.18
FDPS-211ENST00000477057 SLFN5Q08AF3 891 aa16.2■□□□□ 0.18
FDPS-211ENST00000477057 FKBP5Q13451 457 aaPredicted RBP16.2■□□□□ 0.18
FDPS-211ENST00000477057 TCIRG1Q13488 830 aa16.2■□□□□ 0.18
FDPS-211ENST00000477057 TRMT112Q9UI30 125 aaKnown RBP16.2■□□□□ 0.18
FDPS-211ENST00000477057 ABCC12Q96J65 1359 aa16.2■□□□□ 0.18
FDPS-211ENST00000477057 ANKRD31Q8N7Z5 1873 aa16.2■□□□□ 0.18
FDPS-211ENST00000477057 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
FDPS-211ENST00000477057 G2E3Q7L622 706 aa16.19■□□□□ 0.18
FDPS-211ENST00000477057 MAP3K2Q9Y2U5 619 aa16.19■□□□□ 0.18
FDPS-211ENST00000477057 NTSR2O95665 410 aa16.18■□□□□ 0.18
FDPS-211ENST00000477057 YY1P25490 414 aa16.18■□□□□ 0.18
FDPS-211ENST00000477057 NEXNQ0ZGT2 675 aa16.18■□□□□ 0.18
FDPS-211ENST00000477057 FLIIQ13045 1269 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms