RNA–Protein interactions for RNA: ENST00000476931.1

RPN1-202, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 526 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-202ENST00000476931 XAGE3Q8WTP9 111 aa21.7■■□□□ 1.06
RPN1-202ENST00000476931 TUBGCP6Q96RT7 1819 aa21.7■■□□□ 1.06
RPN1-202ENST00000476931 DDX58O95786 925 aaKnown RBP21.69■■□□□ 1.06
RPN1-202ENST00000476931 ANXA1P04083 346 aa21.69■■□□□ 1.06
RPN1-202ENST00000476931 TTLL7Q6ZT98 887 aa21.69■■□□□ 1.06
RPN1-202ENST00000476931 ANKRD13DQ6ZTN6 518 aa21.69■■□□□ 1.06
RPN1-202ENST00000476931 BCL2L12Q9HB09 334 aa21.69■■□□□ 1.06
RPN1-202ENST00000476931 AIMP1Q12904 312 aaKnown RBP21.68■■□□□ 1.06
RPN1-202ENST00000476931 MSL1Q68DK7 614 aa21.68■■□□□ 1.06
RPN1-202ENST00000476931 PLBD2Q8NHP8 589 aa21.68■■□□□ 1.06
RPN1-202ENST00000476931 PARP3Q9Y6F1 533 aa21.68■■□□□ 1.06
RPN1-202ENST00000476931 MMP10P09238 476 aa21.67■■□□□ 1.06
RPN1-202ENST00000476931 ALDH1L2Q3SY69 923 aa21.67■■□□□ 1.06
RPN1-202ENST00000476931 HSP90AB3PQ58FF7 597 aa21.67■■□□□ 1.06
RPN1-202ENST00000476931 GIGYF2Q6Y7W6 1299 aaKnown RBP21.67■■□□□ 1.06
RPN1-202ENST00000476931 SETDB2Q96T68 719 aa21.67■■□□□ 1.06
RPN1-202ENST00000476931 PPP1R1BQ9UD71 204 aaPredicted RBP21.67■■□□□ 1.06
RPN1-202ENST00000476931 NFIXQ14938 502 aa21.65■■□□□ 1.06
RPN1-202ENST00000476931 HLFQ16534 295 aa21.64■■□□□ 1.05
RPN1-202ENST00000476931 RIC3Q7Z5B4 369 aa21.64■■□□□ 1.05
RPN1-202ENST00000476931 ZBTB3Q9H5J0 574 aa21.64■■□□□ 1.05
RPN1-202ENST00000476931 PHAXQ9H814 394 aaKnown RBP21.64■■□□□ 1.05
RPN1-202ENST00000476931 TBC1D9BQ66K14 1250 aa21.63■■□□□ 1.05
RPN1-202ENST00000476931 POLRMTO00411 1230 aaKnown RBP21.62■■□□□ 1.05
RPN1-202ENST00000476931 TCERG1O14776 1098 aaKnown RBP21.62■■□□□ 1.05
RPN1-202ENST00000476931 TCIRG1Q13488 830 aa21.62■■□□□ 1.05
RPN1-202ENST00000476931 KSR2Q6VAB6 950 aa21.62■■□□□ 1.05
RPN1-202ENST00000476931 NIP7Q9Y221 180 aaKnown RBP eCLIP21.62■■□□□ 1.05
RPN1-202ENST00000476931 C4AP0C0L4 1744 aa21.61■■□□□ 1.05
RPN1-202ENST00000476931 SERPINB2P05120 415 aa21.61■■□□□ 1.05
RPN1-202ENST00000476931 FLIIQ13045 1269 aa21.61■■□□□ 1.05
RPN1-202ENST00000476931 PARP10Q53GL7 1025 aa21.61■■□□□ 1.05
RPN1-202ENST00000476931 TPTE2Q6XPS3 522 aa21.61■■□□□ 1.05
RPN1-202ENST00000476931 ZNF34Q8IZ26 560 aa21.61■■□□□ 1.05
RPN1-202ENST00000476931 CD2APQ9Y5K6 639 aa21.61■■□□□ 1.05
RPN1-202ENST00000476931 COL24A1Q17RW2 1714 aa21.6■■□□□ 1.05
RPN1-202ENST00000476931 BRPF1P55201 1214 aaPredicted RBP21.6■■□□□ 1.05
RPN1-202ENST00000476931 BICDL1Q6ZP65 573 aa21.6■■□□□ 1.05
RPN1-202ENST00000476931 CARMIL3Q8ND23 1372 aa21.6■■□□□ 1.05
RPN1-202ENST00000476931 DDR1Q08345 913 aa21.59■■□□□ 1.05
RPN1-202ENST00000476931 TRIM28Q13263 835 aaKnown RBP21.59■■□□□ 1.05
RPN1-202ENST00000476931 MRPL50Q8N5N7 158 aaKnown RBP21.59■■□□□ 1.05
RPN1-202ENST00000476931 SSH1Q8WYL5 1049 aa21.59■■□□□ 1.05
RPN1-202ENST00000476931 NYXQ9GZU5 481 aa21.59■■□□□ 1.05
RPN1-202ENST00000476931 ATP10DQ9P241 1426 aa21.59■■□□□ 1.05
RPN1-202ENST00000476931 PI4KAP2A4QPH2 592 aa21.58■■□□□ 1.05
RPN1-202ENST00000476931 FKBP5Q13451 457 aaPredicted RBP21.58■■□□□ 1.05
RPN1-202ENST00000476931 PPP1R42Q7Z4L9 355 aa21.58■■□□□ 1.05
RPN1-202ENST00000476931 PI4KAP1Q8N8J0 262 aa21.58■■□□□ 1.05
RPN1-202ENST00000476931 LRP5O75197 1615 aa21.58■■□□□ 1.04
RPN1-202ENST00000476931 CACNA1FO60840 1977 aa21.57■■□□□ 1.04
RPN1-202ENST00000476931 SRCAPQ6ZRS2 3230 aa21.57■■□□□ 1.04
RPN1-202ENST00000476931 RARSP54136 660 aaKnown RBP21.57■■□□□ 1.04
RPN1-202ENST00000476931 NEXNQ0ZGT2 675 aa21.57■■□□□ 1.04
RPN1-202ENST00000476931 G2E3Q7L622 706 aa21.57■■□□□ 1.04
RPN1-202ENST00000476931 NBPF5PQ86XG9 351 aaPredicted RBP21.57■■□□□ 1.04
RPN1-202ENST00000476931 METTL22Q9BUU2 404 aaPredicted RBP21.57■■□□□ 1.04
RPN1-202ENST00000476931 PTPRCP08575 1304 aa21.56■■□□□ 1.04
RPN1-202ENST00000476931 SMC4Q9NTJ3 1288 aa21.56■■□□□ 1.04
RPN1-202ENST00000476931 PDZRN3Q9UPQ7 1066 aa21.56■■□□□ 1.04
RPN1-202ENST00000476931 MAP3K2Q9Y2U5 619 aa21.56■■□□□ 1.04
RPN1-202ENST00000476931 NPHP1O15259 732 aa21.55■■□□□ 1.04
RPN1-202ENST00000476931 CNBD1Q8NA66 436 aa21.55■■□□□ 1.04
RPN1-202ENST00000476931 ISCA1Q9BUE6 129 aa21.55■■□□□ 1.04
RPN1-202ENST00000476931 RNF123Q5XPI4 1314 aa21.55■■□□□ 1.04
RPN1-202ENST00000476931 SCN7AQ01118 1682 aa21.54■■□□□ 1.04
RPN1-202ENST00000476931 GPTP24298 496 aa21.54■■□□□ 1.04
RPN1-202ENST00000476931 GTF2E1P29083 439 aaPredicted RBP21.54■■□□□ 1.04
RPN1-202ENST00000476931 TGFB2P61812 414 aa21.54■■□□□ 1.04
RPN1-202ENST00000476931 CCDC191Q8NCU4 936 aa21.54■■□□□ 1.04
RPN1-202ENST00000476931 YTHDC1Q96MU7 727 aaKnown RBP21.54■■□□□ 1.04
RPN1-202ENST00000476931 SYT17Q9BSW7 474 aa21.54■■□□□ 1.04
RPN1-202ENST00000476931 FHDC1Q9C0D6 1143 aaPredicted RBP21.54■■□□□ 1.04
RPN1-202ENST00000476931 IBTKQ9P2D0 1353 aaPredicted RBP21.53■■□□□ 1.04
RPN1-202ENST00000476931 IPO8O15397 1037 aaKnown RBP21.53■■□□□ 1.04
RPN1-202ENST00000476931 ST5P78524 1137 aa21.53■■□□□ 1.04
RPN1-202ENST00000476931 NLRP10Q86W26 655 aa21.53■■□□□ 1.04
RPN1-202ENST00000476931 DNAAF4Q8WXU2 420 aa21.53■■□□□ 1.04
RPN1-202ENST00000476931 UTP14AQ9BVJ6 771 aaKnown RBP21.53■■□□□ 1.04
RPN1-202ENST00000476931 BRIP1Q9BX63 1249 aa21.53■■□□□ 1.04
RPN1-202ENST00000476931 BCORQ6W2J9 1755 aa21.52■■□□□ 1.04
RPN1-202ENST00000476931 SUSD4Q5VX71 490 aa21.52■■□□□ 1.04
RPN1-202ENST00000476931 ARHGAP45Q92619 1136 aa21.52■■□□□ 1.04
RPN1-202ENST00000476931 MYD88Q99836 296 aa21.52■■□□□ 1.04
RPN1-202ENST00000476931 HSP90B1P14625 803 aaKnown RBP21.51■■□□□ 1.03
RPN1-202ENST00000476931 PRR5LQ6MZQ0 368 aa21.51■■□□□ 1.03
RPN1-202ENST00000476931 UBN2Q6ZU65 1347 aa21.51■■□□□ 1.03
RPN1-202ENST00000476931 KIF16BQ96L93 1317 aa21.51■■□□□ 1.03
RPN1-202ENST00000476931 ADCY9O60503 1353 aa21.5■■□□□ 1.03
RPN1-202ENST00000476931 PDE6BP35913 854 aa21.5■■□□□ 1.03
RPN1-202ENST00000476931 LINS1Q8NG48 757 aa21.5■■□□□ 1.03
RPN1-202ENST00000476931 ATP5J2-PTCD1G3V325 749 aa21.49■■□□□ 1.03
RPN1-202ENST00000476931 SLC10A5Q5PT55 438 aa21.49■■□□□ 1.03
RPN1-202ENST00000476931 KLHL34Q8N239 644 aa21.49■■□□□ 1.03
RPN1-202ENST00000476931 BCL2L13Q9BXK5 485 aa21.49■■□□□ 1.03
RPN1-202ENST00000476931 API5Q9BZZ5 524 aaKnown RBP21.49■■□□□ 1.03
RPN1-202ENST00000476931 CWC25Q9NXE8 425 aaPredicted RBP21.49■■□□□ 1.03
RPN1-202ENST00000476931 TRMT112Q9UI30 125 aaKnown RBP21.49■■□□□ 1.03
RPN1-202ENST00000476931 NUP98P52948 1817 aa21.49■■□□□ 1.03
RPN1-202ENST00000476931 NTSR2O95665 410 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms