RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 NIP7Q9Y221 180 aaKnown RBP eCLIP14.19□□□□□ -0.14
SEC13-214ENST00000476597 KLRG2A4D1S0 409 aaPredicted RBP14.18□□□□□ -0.14
SEC13-214ENST00000476597 NPHP1O15259 732 aa14.18□□□□□ -0.14
SEC13-214ENST00000476597 SRGNP10124 158 aa14.18□□□□□ -0.14
SEC13-214ENST00000476597 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
SEC13-214ENST00000476597 NGEFQ8N5V2 710 aa14.18□□□□□ -0.14
SEC13-214ENST00000476597 AFDNP55196 1824 aaKnown RBP14.18□□□□□ -0.14
SEC13-214ENST00000476597 BRCA1P38398 1863 aaKnown RBP14.17□□□□□ -0.14
SEC13-214ENST00000476597 CHL1O00533 1208 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 MYL6BP14649 208 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 PRELPP51888 382 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 RASSF7Q02833 373 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 STYK1Q6J9G0 422 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 TTLL7Q6ZT98 887 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 MASTLQ96GX5 879 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 TRIM35Q9UPQ4 493 aa14.17□□□□□ -0.14
SEC13-214ENST00000476597 ERBB4Q15303 1308 aa14.16□□□□□ -0.14
SEC13-214ENST00000476597 NFKBIEO00221 500 aa14.16□□□□□ -0.14
SEC13-214ENST00000476597 C21orf2O43822 256 aa14.16□□□□□ -0.14
SEC13-214ENST00000476597 LMNB1P20700 586 aa14.16□□□□□ -0.14
SEC13-214ENST00000476597 ZEB1P37275 1124 aaPredicted RBP14.16□□□□□ -0.14
SEC13-214ENST00000476597 PDIA6Q15084 440 aa14.16□□□□□ -0.14
SEC13-214ENST00000476597 CNKSR1Q969H4 720 aa14.16□□□□□ -0.14
SEC13-214ENST00000476597 SCN7AQ01118 1682 aa14.16□□□□□ -0.14
SEC13-214ENST00000476597 MAP3K15Q6ZN16 1313 aa14.15□□□□□ -0.14
SEC13-214ENST00000476597 KIF6Q6ZMV9 814 aa14.15□□□□□ -0.14
SEC13-214ENST00000476597 LRP10Q7Z4F1 713 aa14.15□□□□□ -0.14
SEC13-214ENST00000476597 NMRK2Q9NPI5 230 aa14.15□□□□□ -0.14
SEC13-214ENST00000476597 ARFGEF1Q9Y6D6 1849 aa14.14□□□□□ -0.15
SEC13-214ENST00000476597 FAM177BA6PVY3 158 aa14.14□□□□□ -0.15
SEC13-214ENST00000476597 TOMM70O94826 608 aa14.14□□□□□ -0.15
SEC13-214ENST00000476597 NPR1P16066 1061 aa14.14□□□□□ -0.15
SEC13-214ENST00000476597 EIF2S2P20042 333 aaKnown RBP14.14□□□□□ -0.15
SEC13-214ENST00000476597 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
SEC13-214ENST00000476597 KDM2BQ8NHM5 1336 aa14.14□□□□□ -0.15
SEC13-214ENST00000476597 ZC3H4Q9UPT8 1303 aaKnown RBP14.14□□□□□ -0.15
SEC13-214ENST00000476597 GTF2E1P29083 439 aaPredicted RBP14.13□□□□□ -0.15
SEC13-214ENST00000476597 PRPF40BQ6NWY9 871 aaKnown RBP14.13□□□□□ -0.15
SEC13-214ENST00000476597 GIGYF2Q6Y7W6 1299 aaKnown RBP14.13□□□□□ -0.15
SEC13-214ENST00000476597 ZNF34Q8IZ26 560 aa14.13□□□□□ -0.15
SEC13-214ENST00000476597 C7orf43Q8WVR3 580 aa14.13□□□□□ -0.15
SEC13-214ENST00000476597 ZBTB3Q9H5J0 574 aa14.13□□□□□ -0.15
SEC13-214ENST00000476597 DLG5Q8TDM6 1919 aa14.13□□□□□ -0.15
SEC13-214ENST00000476597 KDM3BQ7LBC6 1761 aa14.12□□□□□ -0.15
SEC13-214ENST00000476597 HSPA6P17066 643 aa14.12□□□□□ -0.15
SEC13-214ENST00000476597 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
SEC13-214ENST00000476597 RRAGCQ9HB90 399 aa14.12□□□□□ -0.15
SEC13-214ENST00000476597 GPTP24298 496 aa14.11□□□□□ -0.15
SEC13-214ENST00000476597 PROSER3Q2NL68 480 aa14.11□□□□□ -0.15
SEC13-214ENST00000476597 SOGA3Q5TF21 947 aa14.11□□□□□ -0.15
SEC13-214ENST00000476597 SUSD4Q5VX71 490 aa14.11□□□□□ -0.15
SEC13-214ENST00000476597 CFAP44Q96MT7 982 aa14.11□□□□□ -0.15
SEC13-214ENST00000476597 LAS1LQ9Y4W2 734 aaKnown RBP14.11□□□□□ -0.15
SEC13-214ENST00000476597 LTBP3Q9NS15 1303 aa14.11□□□□□ -0.15
SEC13-214ENST00000476597 BCORQ6W2J9 1755 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 GLTPD2A6NH11 291 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 APAF1O14727 1248 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 ANXA1P04083 346 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 ALDH1B1P30837 517 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 KRT24Q2M2I5 525 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 ERFEQ4G0M1 354 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 NUTM1Q86Y26 1132 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 UBN2Q6ZU65 1347 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 ANKRD31Q8N7Z5 1873 aa14.1□□□□□ -0.15
SEC13-214ENST00000476597 HOXB7P09629 217 aa14.09□□□□□ -0.15
SEC13-214ENST00000476597 ZNF853P0CG23 659 aa14.09□□□□□ -0.15
SEC13-214ENST00000476597 CRY2Q49AN0 593 aa14.09□□□□□ -0.15
SEC13-214ENST00000476597 COPS6Q7L5N1 327 aa14.09□□□□□ -0.15
SEC13-214ENST00000476597 RBM46Q8TBY0 533 aaKnown RBP14.09□□□□□ -0.15
SEC13-214ENST00000476597 NECTIN2Q92692 538 aa14.09□□□□□ -0.15
SEC13-214ENST00000476597 TAOK3Q9H2K8 898 aa14.09□□□□□ -0.15
SEC13-214ENST00000476597 DDX21Q9NR30 783 aaKnown RBP eCLIP14.09□□□□□ -0.15
SEC13-214ENST00000476597 PARP10Q53GL7 1025 aa14.08□□□□□ -0.16
SEC13-214ENST00000476597 CCDC93Q567U6 631 aa14.08□□□□□ -0.16
SEC13-214ENST00000476597 XAGE3Q8WTP9 111 aa14.08□□□□□ -0.16
SEC13-214ENST00000476597 DLEC1Q9Y238 1755 aa14.08□□□□□ -0.16
SEC13-214ENST00000476597 IBTKQ9P2D0 1353 aaPredicted RBP14.08□□□□□ -0.16
SEC13-214ENST00000476597 NTSR2O95665 410 aa14.07□□□□□ -0.16
SEC13-214ENST00000476597 AIMP1Q12904 312 aaKnown RBP14.07□□□□□ -0.16
SEC13-214ENST00000476597 CCDC184Q52MB2 194 aa14.07□□□□□ -0.16
SEC13-214ENST00000476597 SLC10A5Q5PT55 438 aa14.07□□□□□ -0.16
SEC13-214ENST00000476597 DPY19L2Q6NUT2 758 aa14.07□□□□□ -0.16
SEC13-214ENST00000476597 PPP1R42Q7Z4L9 355 aa14.07□□□□□ -0.16
SEC13-214ENST00000476597 C16orf71Q8IYS4 520 aaPredicted RBP14.07□□□□□ -0.16
SEC13-214ENST00000476597 MBIPQ9NS73 344 aa14.07□□□□□ -0.16
SEC13-214ENST00000476597 ABCC12Q96J65 1359 aa14.07□□□□□ -0.16
SEC13-214ENST00000476597 LAMB4A4D0S4 1761 aa14.06□□□□□ -0.16
SEC13-214ENST00000476597 ZNF316A6NFI3 1004 aaPredicted RBP14.06□□□□□ -0.16
SEC13-214ENST00000476597 VEGFAP15692 232 aaPredicted RBP14.06□□□□□ -0.16
SEC13-214ENST00000476597 HOXA10P31260 410 aaPredicted RBP14.06□□□□□ -0.16
SEC13-214ENST00000476597 HSP90AB3PQ58FF7 597 aa14.06□□□□□ -0.16
SEC13-214ENST00000476597 HDGFL1Q5TGJ6 251 aa14.06□□□□□ -0.16
SEC13-214ENST00000476597 DUSP27Q5VZP5 1158 aa14.06□□□□□ -0.16
SEC13-214ENST00000476597 OLFM4Q6UX06 510 aa14.06□□□□□ -0.16
SEC13-214ENST00000476597 RTKN2Q8IZC4 609 aa14.06□□□□□ -0.16
SEC13-214ENST00000476597 UTP14AQ9BVJ6 771 aaKnown RBP14.06□□□□□ -0.16
SEC13-214ENST00000476597 POTECB2RU33 542 aa14.05□□□□□ -0.16
SEC13-214ENST00000476597 GNAI1P63096 354 aa14.05□□□□□ -0.16
SEC13-214ENST00000476597 FKBP4Q02790 459 aaKnown RBP eCLIP14.05□□□□□ -0.16
SEC13-214ENST00000476597 FSTL1Q12841 308 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms