RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 HOXB7P09629 217 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 MYL6BP14649 208 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 GTF2E1P29083 439 aaPredicted RBP13.29□□□□□ -0.28
CCM2-208ENST00000476594 GNAI1P63096 354 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 NBPF10Q6P3W6 841 aaKnown RBP13.29□□□□□ -0.28
CCM2-208ENST00000476594 TPTE2Q6XPS3 522 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 C2CD5Q86YS7 1000 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 NBPF15Q8N660 670 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 NIP7Q9Y221 180 aaKnown RBP eCLIP13.29□□□□□ -0.28
CCM2-208ENST00000476594 KIAA1551Q9HCM1 1747 aa13.29□□□□□ -0.28
CCM2-208ENST00000476594 EIF2S2P20042 333 aaKnown RBP13.28□□□□□ -0.28
CCM2-208ENST00000476594 CHRNA5P30532 468 aa13.28□□□□□ -0.28
CCM2-208ENST00000476594 PRR5LQ6MZQ0 368 aa13.28□□□□□ -0.28
CCM2-208ENST00000476594 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
CCM2-208ENST00000476594 TTLL6Q8N841 843 aa13.28□□□□□ -0.28
CCM2-208ENST00000476594 NYXQ9GZU5 481 aa13.28□□□□□ -0.28
CCM2-208ENST00000476594 TRIM35Q9UPQ4 493 aa13.28□□□□□ -0.28
CCM2-208ENST00000476594 MAP3K15Q6ZN16 1313 aa13.28□□□□□ -0.28
CCM2-208ENST00000476594 KCNA3P22001 575 aa13.27□□□□□ -0.29
CCM2-208ENST00000476594 IFT57Q9NWB7 429 aa13.27□□□□□ -0.29
CCM2-208ENST00000476594 ARFGEF1Q9Y6D6 1849 aa13.27□□□□□ -0.29
CCM2-208ENST00000476594 BRCA1P38398 1863 aaKnown RBP13.27□□□□□ -0.29
CCM2-208ENST00000476594 HSP90AB3PQ58FF7 597 aa13.26□□□□□ -0.29
CCM2-208ENST00000476594 ZNF622Q969S3 477 aaKnown RBP eCLIP13.26□□□□□ -0.29
CCM2-208ENST00000476594 ATP10DQ9P241 1426 aa13.25□□□□□ -0.29
CCM2-208ENST00000476594 SOGA3Q5TF21 947 aa13.25□□□□□ -0.29
CCM2-208ENST00000476594 HDGFL1Q5TGJ6 251 aa13.25□□□□□ -0.29
CCM2-208ENST00000476594 CNKSR1Q969H4 720 aa13.25□□□□□ -0.29
CCM2-208ENST00000476594 GPBP1L1Q9HC44 474 aaPredicted RBP13.25□□□□□ -0.29
CCM2-208ENST00000476594 IBTKQ9P2D0 1353 aaPredicted RBP13.24□□□□□ -0.29
CCM2-208ENST00000476594 NCBP3Q53F19 620 aaKnown RBP13.24□□□□□ -0.29
CCM2-208ENST00000476594 PARP10Q53GL7 1025 aa13.24□□□□□ -0.29
CCM2-208ENST00000476594 STYK1Q6J9G0 422 aa13.24□□□□□ -0.29
CCM2-208ENST00000476594 GIGYF2Q6Y7W6 1299 aaKnown RBP13.24□□□□□ -0.29
CCM2-208ENST00000476594 PPP1R42Q7Z4L9 355 aa13.24□□□□□ -0.29
CCM2-208ENST00000476594 MASTLQ96GX5 879 aa13.24□□□□□ -0.29
CCM2-208ENST00000476594 ZBTB3Q9H5J0 574 aa13.24□□□□□ -0.29
CCM2-208ENST00000476594 DDX21Q9NR30 783 aaKnown RBP eCLIP13.24□□□□□ -0.29
CCM2-208ENST00000476594 DBF4Q9UBU7 674 aaPredicted RBP13.24□□□□□ -0.29
CCM2-208ENST00000476594 DLEC1Q9Y238 1755 aa13.24□□□□□ -0.29
CCM2-208ENST00000476594 ADCY9O60503 1353 aa13.23□□□□□ -0.29
CCM2-208ENST00000476594 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
CCM2-208ENST00000476594 RNF123Q5XPI4 1314 aa13.22□□□□□ -0.29
CCM2-208ENST00000476594 FAM177BA6PVY3 158 aa13.22□□□□□ -0.29
CCM2-208ENST00000476594 NPR1P16066 1061 aa13.22□□□□□ -0.29
CCM2-208ENST00000476594 HLFQ16534 295 aa13.22□□□□□ -0.29
CCM2-208ENST00000476594 TTLL7Q6ZT98 887 aa13.22□□□□□ -0.29
CCM2-208ENST00000476594 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
CCM2-208ENST00000476594 HYPKQ9NX55 129 aa13.22□□□□□ -0.29
CCM2-208ENST00000476594 ZC3H4Q9UPT8 1303 aaKnown RBP13.21□□□□□ -0.29
CCM2-208ENST00000476594 SRGNP10124 158 aa13.21□□□□□ -0.29
CCM2-208ENST00000476594 ALDH1B1P30837 517 aa13.21□□□□□ -0.29
CCM2-208ENST00000476594 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
CCM2-208ENST00000476594 NECTIN2Q92692 538 aa13.21□□□□□ -0.29
CCM2-208ENST00000476594 RNF181Q9P0P0 153 aa13.21□□□□□ -0.29
CCM2-208ENST00000476594 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 GPTP24298 496 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 AIMP1Q12904 312 aaKnown RBP13.2□□□□□ -0.3
CCM2-208ENST00000476594 PDIA6Q15084 440 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 C9orf131Q5VYM1 1079 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 COPS6Q7L5N1 327 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 CCDC24Q8N4L8 307 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 XAGE3Q8WTP9 111 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 ANKRD31Q8N7Z5 1873 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 RIC1Q4ADV7 1423 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 NUP98P52948 1817 aa13.2□□□□□ -0.3
CCM2-208ENST00000476594 IL16Q14005 1332 aa13.19□□□□□ -0.3
CCM2-208ENST00000476594 KDM2BQ8NHM5 1336 aa13.19□□□□□ -0.3
CCM2-208ENST00000476594 LMNB1P20700 586 aa13.19□□□□□ -0.3
CCM2-208ENST00000476594 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
CCM2-208ENST00000476594 ZNF526Q8TF50 670 aaPredicted RBP13.19□□□□□ -0.3
CCM2-208ENST00000476594 RPGRQ92834 1020 aaKnown RBP13.19□□□□□ -0.3
CCM2-208ENST00000476594 TMX4Q9H1E5 349 aaPredicted RBP13.19□□□□□ -0.3
CCM2-208ENST00000476594 CHPF2Q9P2E5 772 aa13.19□□□□□ -0.3
CCM2-208ENST00000476594 KLRG2A4D1S0 409 aaPredicted RBP13.18□□□□□ -0.3
CCM2-208ENST00000476594 ANXA1P04083 346 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 GOLGA2Q08379 1002 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 KRT24Q2M2I5 525 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 CCDC93Q567U6 631 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 CCDC30Q5VVM6 783 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 PRPF40BQ6NWY9 871 aaKnown RBP13.18□□□□□ -0.3
CCM2-208ENST00000476594 WWC1Q8IX03 1113 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 ZNF34Q8IZ26 560 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
CCM2-208ENST00000476594 UTP14AQ9BVJ6 771 aaKnown RBP13.18□□□□□ -0.3
CCM2-208ENST00000476594 COL11A2P13942 1736 aaPredicted RBP13.17□□□□□ -0.3
CCM2-208ENST00000476594 C21orf2O43822 256 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 DDX58O95786 925 aaKnown RBP13.17□□□□□ -0.3
CCM2-208ENST00000476594 HSP90B1P14625 803 aaKnown RBP13.17□□□□□ -0.3
CCM2-208ENST00000476594 PROSER3Q2NL68 480 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 ANKRD13DQ6ZTN6 518 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 LRP10Q7Z4F1 713 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 FAM9BQ8IZU0 186 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 STK31Q9BXU1 1019 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 TAOK3Q9H2K8 898 aa13.17□□□□□ -0.3
CCM2-208ENST00000476594 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms