RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 VAC14Q08AM6 782 aa11.18□□□□□ -0.62
NUP58-209ENST00000476553 MICALL1Q8N3F8 863 aa11.18□□□□□ -0.62
NUP58-209ENST00000476553 GPC6Q9Y625 555 aaPredicted RBP11.18□□□□□ -0.62
NUP58-209ENST00000476553 PARP3Q9Y6F1 533 aa11.18□□□□□ -0.62
NUP58-209ENST00000476553 SLC30A3Q99726 388 aa11.17□□□□□ -0.62
NUP58-209ENST00000476553 SCHIP1Q9P0W5 487 aaPredicted RBP11.17□□□□□ -0.62
NUP58-209ENST00000476553 PCDHGA11Q9Y5H2 935 aa11.17□□□□□ -0.62
NUP58-209ENST00000476553 EML1O00423 815 aa11.16□□□□□ -0.62
NUP58-209ENST00000476553 H2AFB1P0C5Y9 115 aa11.16□□□□□ -0.62
NUP58-209ENST00000476553 H2AFB2P0C5Z0 115 aa11.16□□□□□ -0.62
NUP58-209ENST00000476553 TRIM28Q13263 835 aaKnown RBP11.15□□□□□ -0.62
NUP58-209ENST00000476553 GRIK4Q16099 956 aa11.15□□□□□ -0.62
NUP58-209ENST00000476553 C8orf86Q6ZUL3 223 aa11.15□□□□□ -0.62
NUP58-209ENST00000476553 C7orf43Q8WVR3 580 aa11.15□□□□□ -0.62
NUP58-209ENST00000476553 PRM3Q9NNZ6 103 aa11.15□□□□□ -0.62
NUP58-209ENST00000476553 ADH7P40394 386 aa11.14□□□□□ -0.63
NUP58-209ENST00000476553 LRP8Q14114 963 aa11.14□□□□□ -0.63
NUP58-209ENST00000476553 TEAD4Q15561 434 aa11.14□□□□□ -0.63
NUP58-209ENST00000476553 LRRC69Q6ZNQ3 347 aa11.14□□□□□ -0.63
NUP58-209ENST00000476553 C20orf204Q6ZNR8 217 aa11.14□□□□□ -0.63
NUP58-209ENST00000476553 L3MBTL2Q969R5 705 aa11.14□□□□□ -0.63
NUP58-209ENST00000476553 BCANQ96GW7 911 aa11.14□□□□□ -0.63
NUP58-209ENST00000476553 EPHA4P54764 986 aa11.13□□□□□ -0.63
NUP58-209ENST00000476553 SFSWAPQ12872 951 aaKnown RBP11.13□□□□□ -0.63
NUP58-209ENST00000476553 ADGRE1Q14246 886 aa11.13□□□□□ -0.63
NUP58-209ENST00000476553 BACH1O14867 736 aa11.12□□□□□ -0.63
NUP58-209ENST00000476553 MBTPS1Q14703 1052 aa11.12□□□□□ -0.63
NUP58-209ENST00000476553 NBPF11Q86T75 865 aa11.12□□□□□ -0.63
NUP58-209ENST00000476553 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
NUP58-209ENST00000476553 SPEM2Q0P670 501 aa11.11□□□□□ -0.63
NUP58-209ENST00000476553 C9orf172C9J069 976 aa11.1□□□□□ -0.63
NUP58-209ENST00000476553 ZNF358Q9NW07 568 aa11.1□□□□□ -0.63
NUP58-209ENST00000476553 SELPP16109 830 aa11.09□□□□□ -0.63
NUP58-209ENST00000476553 NOS2P35228 1153 aa11.09□□□□□ -0.63
NUP58-209ENST00000476553 KRTAP19-1Q8IUB9 90 aa11.09□□□□□ -0.63
NUP58-209ENST00000476553 SOX11P35716 441 aa11.08□□□□□ -0.64
NUP58-209ENST00000476553 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
NUP58-209ENST00000476553 PIK3CDO00329 1044 aa11.07□□□□□ -0.64
NUP58-209ENST00000476553 ELNP15502 786 aa11.07□□□□□ -0.64
NUP58-209ENST00000476553 NEUROD1Q13562 356 aa11.07□□□□□ -0.64
NUP58-209ENST00000476553 WASHC4Q2M389 1173 aa11.07□□□□□ -0.64
NUP58-209ENST00000476553 RAB44Q7Z6P3 723 aaPredicted RBP11.07□□□□□ -0.64
NUP58-209ENST00000476553 SLC9A9Q8IVB4 645 aa11.07□□□□□ -0.64
NUP58-209ENST00000476553 KCNQ4P56696 695 aa11.06□□□□□ -0.64
NUP58-209ENST00000476553 GTF2IP78347 998 aa11.06□□□□□ -0.64
NUP58-209ENST00000476553 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.06□□□□□ -0.64
NUP58-209ENST00000476553 GDPD2Q9HCC8 539 aa11.06□□□□□ -0.64
NUP58-209ENST00000476553 A0A0A0MRY4 1105 aa11.05□□□□□ -0.64
NUP58-209ENST00000476553 SEMA3FQ13275 785 aa11.05□□□□□ -0.64
NUP58-209ENST00000476553 EML3Q32P44 896 aa11.05□□□□□ -0.64
NUP58-209ENST00000476553 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
NUP58-209ENST00000476553 KRTAP9-9Q9BYP9 154 aa11.05□□□□□ -0.64
NUP58-209ENST00000476553 KRTAP9-4Q9BYQ2 154 aa11.05□□□□□ -0.64
NUP58-209ENST00000476553 HYAL3O43820 417 aaPredicted RBP11.04□□□□□ -0.64
NUP58-209ENST00000476553 LILRB5O75023 590 aa11.04□□□□□ -0.64
NUP58-209ENST00000476553 TRAPPC3LQ5T215 181 aa11.04□□□□□ -0.64
NUP58-209ENST00000476553 RHPN1Q8TCX5 695 aa11.04□□□□□ -0.64
NUP58-209ENST00000476553 LENG1Q96BZ8 264 aaPredicted RBP11.04□□□□□ -0.64
NUP58-209ENST00000476553 BRD7Q9NPI1 651 aa11.04□□□□□ -0.64
NUP58-209ENST00000476553 NOD1Q9Y239 953 aa11.04□□□□□ -0.64
NUP58-209ENST00000476553 POTEAQ6S8J7 498 aa11.03□□□□□ -0.64
NUP58-209ENST00000476553 SSBP4Q9BWG4 385 aaPredicted RBP11.03□□□□□ -0.64
NUP58-209ENST00000476553 NEUROD4Q9HD90 331 aa11.03□□□□□ -0.64
NUP58-209ENST00000476553 ZNF232Q9UNY5 417 aa11.03□□□□□ -0.64
NUP58-209ENST00000476553 SERTM1A2A2V5 107 aa11.02□□□□□ -0.65
NUP58-209ENST00000476553 ABL2P42684 1182 aa11.02□□□□□ -0.65
NUP58-209ENST00000476553 NRG1Q02297 640 aaPredicted RBP11.02□□□□□ -0.65
NUP58-209ENST00000476553 TYRO3Q06418 890 aa11.02□□□□□ -0.65
NUP58-209ENST00000476553 TBCELQ5QJ74 424 aa11.02□□□□□ -0.65
NUP58-209ENST00000476553 HIRAP54198 1017 aaPredicted RBP11.01□□□□□ -0.65
NUP58-209ENST00000476553 HSH2DQ96JZ2 352 aa11.01□□□□□ -0.65
NUP58-209ENST00000476553 LZTS3O60299 673 aaPredicted RBP11□□□□□ -0.65
NUP58-209ENST00000476553 PSME1Q06323 249 aa11□□□□□ -0.65
NUP58-209ENST00000476553 C1orf53Q5VUE5 145 aa11□□□□□ -0.65
NUP58-209ENST00000476553 SHISA2Q6UWI4 295 aa11□□□□□ -0.65
NUP58-209ENST00000476553 ILDR2Q71H61 639 aa11□□□□□ -0.65
NUP58-209ENST00000476553 RAC1P63000 192 aa10.99□□□□□ -0.65
NUP58-209ENST00000476553 TNS4Q8IZW8 715 aa10.99□□□□□ -0.65
NUP58-209ENST00000476553 NFATC2IPQ8NCF5 419 aa10.99□□□□□ -0.65
NUP58-209ENST00000476553 CEP63Q96MT8 703 aa10.99□□□□□ -0.65
NUP58-209ENST00000476553 KCNH4Q9UQ05 1017 aa10.99□□□□□ -0.65
NUP58-209ENST00000476553 BTBD11A6QL63 1104 aa10.98□□□□□ -0.65
NUP58-209ENST00000476553 NCOA4Q13772 614 aa10.98□□□□□ -0.65
NUP58-209ENST00000476553 TP53INP1Q96A56 240 aa10.98□□□□□ -0.65
NUP58-209ENST00000476553 SLC6A14Q9UN76 642 aa10.98□□□□□ -0.65
NUP58-209ENST00000476553 SKIP12755 728 aa10.97□□□□□ -0.65
NUP58-209ENST00000476553 PSMA6P60900 246 aaKnown RBP10.97□□□□□ -0.65
NUP58-209ENST00000476553 FMR1NBQ8N0W7 255 aaPredicted RBP10.97□□□□□ -0.65
NUP58-209ENST00000476553 JPH1Q9HDC5 661 aaPredicted RBP10.96□□□□□ -0.65
NUP58-209ENST00000476553 ANKIB1Q9P2G1 1089 aa10.96□□□□□ -0.65
NUP58-209ENST00000476553 BHMTQ93088 406 aa10.95□□□□□ -0.66
NUP58-209ENST00000476553 GOLGA2P5Q9HBQ8 144 aa10.95□□□□□ -0.66
NUP58-209ENST00000476553 NAGPAQ9UK23 515 aa10.95□□□□□ -0.66
NUP58-209ENST00000476553 AFF1P51825 1210 aaKnown RBP10.94□□□□□ -0.66
NUP58-209ENST00000476553 ZNF280CQ8ND82 737 aa10.94□□□□□ -0.66
NUP58-209ENST00000476553 UBE2OQ9C0C9 1292 aaKnown RBP10.94□□□□□ -0.66
NUP58-209ENST00000476553 PHACTR1Q9C0D0 580 aa10.94□□□□□ -0.66
NUP58-209ENST00000476553 SUSD3Q96L08 255 aa10.93□□□□□ -0.66
NUP58-209ENST00000476553 ARXQ96QS3 562 aa10.93□□□□□ -0.66
NUP58-209ENST00000476553 TSPAN10Q9H1Z9 355 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms