RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 USP16Q9Y5T5 823 aa10.86□□□□□ -0.67
CCDC66-216ENST00000476142 STRCP1A6NGW2 1772 aa10.86□□□□□ -0.67
CCDC66-216ENST00000476142 IGKV5-2P06315 115 aa10.86□□□□□ -0.67
CCDC66-216ENST00000476142 SNRPA1P09661 255 aaKnown RBP10.86□□□□□ -0.67
CCDC66-216ENST00000476142 NUCB2P80303 420 aa10.86□□□□□ -0.67
CCDC66-216ENST00000476142 G3BP1Q13283 466 aaKnown RBP eCLIP10.86□□□□□ -0.67
CCDC66-216ENST00000476142 FOXD4L5Q5VV16 416 aaPredicted RBP10.86□□□□□ -0.67
CCDC66-216ENST00000476142 TOM1L2Q6ZVM7 507 aa10.86□□□□□ -0.67
CCDC66-216ENST00000476142 BRINP3Q76B58 766 aa10.86□□□□□ -0.67
CCDC66-216ENST00000476142 FOXD4L4Q8WXT5 416 aaPredicted RBP10.86□□□□□ -0.67
CCDC66-216ENST00000476142 GPATCH3Q96I76 525 aa10.86□□□□□ -0.67
CCDC66-216ENST00000476142 GLRX3O76003 335 aaKnown RBP10.85□□□□□ -0.67
CCDC66-216ENST00000476142 ERC1Q8IUD2 1116 aa10.85□□□□□ -0.67
CCDC66-216ENST00000476142 TMX3Q96JJ7 454 aa10.85□□□□□ -0.67
CCDC66-216ENST00000476142 FMNL2Q96PY5 1086 aa10.85□□□□□ -0.67
CCDC66-216ENST00000476142 BAG4O95429 457 aaKnown RBP10.85□□□□□ -0.67
CCDC66-216ENST00000476142 MCTP1Q6DN14 999 aa10.85□□□□□ -0.67
CCDC66-216ENST00000476142 KIAA1211Q6ZU35 1233 aa10.85□□□□□ -0.67
CCDC66-216ENST00000476142 KLHDC4Q8TBB5 520 aa10.85□□□□□ -0.67
CCDC66-216ENST00000476142 CWC22Q9HCG8 908 aaKnown RBP10.85□□□□□ -0.67
CCDC66-216ENST00000476142 DIAPH3Q9NSV4 1193 aa10.85□□□□□ -0.67
CCDC66-216ENST00000476142 NEURL1BA8MQ27 555 aa10.84□□□□□ -0.67
CCDC66-216ENST00000476142 KAZALD1Q96I82 304 aa10.84□□□□□ -0.67
CCDC66-216ENST00000476142 ECHDC1Q9NTX5 307 aa10.84□□□□□ -0.67
CCDC66-216ENST00000476142 ANAPC15P60006 121 aa10.84□□□□□ -0.67
CCDC66-216ENST00000476142 ANKRD13DQ6ZTN6 518 aa10.84□□□□□ -0.67
CCDC66-216ENST00000476142 CCDC8Q9H0W5 538 aaPredicted RBP10.84□□□□□ -0.67
CCDC66-216ENST00000476142 TTC41PQ6P2S7 1318 aa10.84□□□□□ -0.67
CCDC66-216ENST00000476142 ATP5J2-PTCD1G3V325 749 aa10.83□□□□□ -0.68
CCDC66-216ENST00000476142 SGSM2O43147 1006 aa10.83□□□□□ -0.68
CCDC66-216ENST00000476142 PTCD1O75127 700 aaKnown RBP10.83□□□□□ -0.68
CCDC66-216ENST00000476142 PTMSP20962 102 aa10.83□□□□□ -0.68
CCDC66-216ENST00000476142 GCKRQ14397 625 aa10.83□□□□□ -0.68
CCDC66-216ENST00000476142 SKOR2Q2VWA4 1001 aaPredicted RBP10.83□□□□□ -0.68
CCDC66-216ENST00000476142 METTL22Q9BUU2 404 aaPredicted RBP10.83□□□□□ -0.68
CCDC66-216ENST00000476142 STRN4Q9NRL3 753 aa10.83□□□□□ -0.68
CCDC66-216ENST00000476142 SIPA1L3O60292 1781 aaPredicted RBP10.83□□□□□ -0.68
CCDC66-216ENST00000476142 NCLP19338 710 aaKnown RBP10.82□□□□□ -0.68
CCDC66-216ENST00000476142 MCM2P49736 904 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 DDX54Q8TDD1 881 aaKnown RBP10.82□□□□□ -0.68
CCDC66-216ENST00000476142 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.82□□□□□ -0.68
CCDC66-216ENST00000476142 DDX49Q9Y6V7 483 aaKnown RBP10.82□□□□□ -0.68
CCDC66-216ENST00000476142 SASH1O94885 1247 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 XRCC6P12956 609 aaKnown RBP eCLIP10.82□□□□□ -0.68
CCDC66-216ENST00000476142 HSPA4P34932 840 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 EPHA10Q5JZY3 1008 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 UTYO14607 1347 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 CPDO75976 1380 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 FSD2A1L4K1 749 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 ZCRB1Q8TBF4 217 aaKnown RBP10.82□□□□□ -0.68
CCDC66-216ENST00000476142 TLR7Q9NYK1 1049 aaKnown RBP10.82□□□□□ -0.68
CCDC66-216ENST00000476142 SLAIN2Q9P270 581 aa10.82□□□□□ -0.68
CCDC66-216ENST00000476142 RAD50Q92878 1312 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 USP42Q9H9J4 1324 aaKnown RBP10.81□□□□□ -0.68
CCDC66-216ENST00000476142 C5P01031 1676 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 ADAMTS7Q9UKP4 1686 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 COL18A1P39060 1754 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 EAF2Q96CJ1 260 aaPredicted RBP10.81□□□□□ -0.68
CCDC66-216ENST00000476142 PANK2Q9BZ23 570 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 LSG1Q9H089 658 aaKnown RBP10.81□□□□□ -0.68
CCDC66-216ENST00000476142 TUBGCP6Q96RT7 1819 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 ZNF335Q9H4Z2 1342 aaPredicted RBP10.81□□□□□ -0.68
CCDC66-216ENST00000476142 RUFY2Q8WXA3 655 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 CHAMP1Q96JM3 812 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 CHMP3Q9Y3E7 222 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 WDR17Q8IZU2 1322 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 SCN11AQ9UI33 1791 aa10.81□□□□□ -0.68
CCDC66-216ENST00000476142 CYP2E1P05181 493 aaPredicted RBP10.8□□□□□ -0.68
CCDC66-216ENST00000476142 EVA1CP58658 441 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 LARP6Q9BRS8 491 aaKnown RBP10.8□□□□□ -0.68
CCDC66-216ENST00000476142 BOLA2Q9H3K6 86 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 SNX14Q9Y5W7 946 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 PCDH11XQ9BZA7 1347 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 PCDH11YQ9BZA8 1340 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 A0A087WZG4 1122 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 EVI5LQ96CN4 794 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 ZDHHC9Q9Y397 364 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 AK9Q5TCS8 1911 aa10.8□□□□□ -0.68
CCDC66-216ENST00000476142 CLEC17AQ6ZS10 378 aa10.79□□□□□ -0.68
CCDC66-216ENST00000476142 LRP10Q7Z4F1 713 aa10.79□□□□□ -0.68
CCDC66-216ENST00000476142 RASEFQ8IZ41 740 aa10.79□□□□□ -0.68
CCDC66-216ENST00000476142 PRPF40AO75400 957 aaKnown RBP10.79□□□□□ -0.68
CCDC66-216ENST00000476142 KCNJ4P48050 445 aa10.79□□□□□ -0.68
CCDC66-216ENST00000476142 PTH1RQ03431 593 aa10.79□□□□□ -0.68
CCDC66-216ENST00000476142 PRPF40BQ6NWY9 871 aaKnown RBP10.79□□□□□ -0.68
CCDC66-216ENST00000476142 FSD1Q9BTV5 496 aa10.79□□□□□ -0.68
CCDC66-216ENST00000476142 GRPEL1Q9HAV7 217 aa10.79□□□□□ -0.68
CCDC66-216ENST00000476142 CCDC9Q9Y3X0 531 aaKnown RBP10.79□□□□□ -0.68
CCDC66-216ENST00000476142 CPA1P15085 419 aa10.78□□□□□ -0.68
CCDC66-216ENST00000476142 MRE11P49959 708 aa10.78□□□□□ -0.68
CCDC66-216ENST00000476142 FOXD4L6Q3SYB3 417 aaPredicted RBP10.78□□□□□ -0.68
CCDC66-216ENST00000476142 FOXD4L3Q6VB84 417 aaPredicted RBP10.78□□□□□ -0.68
CCDC66-216ENST00000476142 ZNF330Q9Y3S2 320 aaPredicted RBP10.78□□□□□ -0.68
CCDC66-216ENST00000476142 MRC1P22897 1456 aa10.78□□□□□ -0.68
CCDC66-216ENST00000476142 IL2RBP14784 551 aa10.78□□□□□ -0.68
CCDC66-216ENST00000476142 CASTP20810 708 aaKnown RBP10.78□□□□□ -0.68
CCDC66-216ENST00000476142 PLBD2Q8NHP8 589 aa10.78□□□□□ -0.68
CCDC66-216ENST00000476142 FAM227BQ96M60 508 aa10.78□□□□□ -0.68
CCDC66-216ENST00000476142 NBPF26B4DH59 902 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms