RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 SLX4Q8IY92 1834 aa9.1□□□□□ -0.95
SP140-209ENST00000476126 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
SP140-209ENST00000476126 ST5P78524 1137 aa9.09□□□□□ -0.95
SP140-209ENST00000476126 DALRD3Q5D0E6 543 aaKnown RBP9.09□□□□□ -0.95
SP140-209ENST00000476126 NGEFQ8N5V2 710 aa9.09□□□□□ -0.95
SP140-209ENST00000476126 CNBD1Q8NA66 436 aa9.09□□□□□ -0.95
SP140-209ENST00000476126 ZNF526Q8TF50 670 aaPredicted RBP9.09□□□□□ -0.95
SP140-209ENST00000476126 SETDB2Q96T68 719 aa9.09□□□□□ -0.95
SP140-209ENST00000476126 FOXD4L1Q9NU39 408 aa9.09□□□□□ -0.95
SP140-209ENST00000476126 LAS1LQ9Y4W2 734 aaKnown RBP9.09□□□□□ -0.95
SP140-209ENST00000476126 H0YIN7 160 aa9.08□□□□□ -0.96
SP140-209ENST00000476126 CAMTA2O94983 1202 aa9.08□□□□□ -0.96
SP140-209ENST00000476126 MYL6BP14649 208 aa9.08□□□□□ -0.96
SP140-209ENST00000476126 EIF4A1P60842 406 aaKnown RBP9.08□□□□□ -0.96
SP140-209ENST00000476126 KIF6Q6ZMV9 814 aa9.08□□□□□ -0.96
SP140-209ENST00000476126 C2CD5Q86YS7 1000 aa9.08□□□□□ -0.96
SP140-209ENST00000476126 RNF39Q9H2S5 420 aa9.08□□□□□ -0.96
SP140-209ENST00000476126 GPBP1L1Q9HC44 474 aaPredicted RBP9.08□□□□□ -0.96
SP140-209ENST00000476126 ADCY9O60503 1353 aa9.08□□□□□ -0.96
SP140-209ENST00000476126 ZNF316A6NFI3 1004 aaPredicted RBP9.07□□□□□ -0.96
SP140-209ENST00000476126 FAM177BA6PVY3 158 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 NBPF26B4DH59 902 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 KCNA3P22001 575 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 PDE6BP35913 854 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 PRR5LQ6MZQ0 368 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 NBPF10Q6P3W6 841 aaKnown RBP9.07□□□□□ -0.96
SP140-209ENST00000476126 NBPF5PQ86XG9 351 aaPredicted RBP9.07□□□□□ -0.96
SP140-209ENST00000476126 CCDC24Q8N4L8 307 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 NBPF15Q8N660 670 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 ADAMTS8Q9UP79 889 aa9.07□□□□□ -0.96
SP140-209ENST00000476126 CACNA1FO60840 1977 aa9.06□□□□□ -0.96
SP140-209ENST00000476126 EIF2S2P20042 333 aaKnown RBP9.06□□□□□ -0.96
SP140-209ENST00000476126 GTF2E1P29083 439 aaPredicted RBP9.06□□□□□ -0.96
SP140-209ENST00000476126 CLEC4GQ6UXB4 293 aa9.06□□□□□ -0.96
SP140-209ENST00000476126 ZNF622Q969S3 477 aaKnown RBP eCLIP9.06□□□□□ -0.96
SP140-209ENST00000476126 NIP7Q9Y221 180 aaKnown RBP eCLIP9.06□□□□□ -0.96
SP140-209ENST00000476126 ERBB4Q15303 1308 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 ANP32CO43423 234 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 TTLL6Q8N841 843 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 NECTIN2Q92692 538 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 BRIP1Q9BX63 1249 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 ZBTB3Q9H5J0 574 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 BABAM1Q9NWV8 329 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 ZNF219Q9P2Y4 722 aaPredicted RBP9.05□□□□□ -0.96
SP140-209ENST00000476126 PDZRN3Q9UPQ7 1066 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 MYH3P11055 1940 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 DDX60Q8IY21 1712 aaKnown RBP9.05□□□□□ -0.96
SP140-209ENST00000476126 MAP3K15Q6ZN16 1313 aa9.05□□□□□ -0.96
SP140-209ENST00000476126 TAF1P21675 1872 aa9.04□□□□□ -0.96
SP140-209ENST00000476126 RASSF7Q02833 373 aa9.04□□□□□ -0.96
SP140-209ENST00000476126 HLFQ16534 295 aa9.04□□□□□ -0.96
SP140-209ENST00000476126 RNF181Q9P0P0 153 aa9.04□□□□□ -0.96
SP140-209ENST00000476126 SPEF2Q9C093 1822 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 SENP3-EIF4A1A0A087X0R7 540 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 APAF1O14727 1248 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 RGL2O15211 777 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 GPTP24298 496 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 C1QTNF8P60827 252 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 CALD1Q05682 793 aaKnown RBP9.03□□□□□ -0.96
SP140-209ENST00000476126 C9orf131Q5VYM1 1079 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 TPTE2Q6XPS3 522 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 TTLL7Q6ZT98 887 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 NYXQ9GZU5 481 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 TRIM35Q9UPQ4 493 aa9.03□□□□□ -0.96
SP140-209ENST00000476126 ERVV-1B6SEH8 477 aa9.02□□□□□ -0.97
SP140-209ENST00000476126 ANXA1P04083 346 aa9.02□□□□□ -0.97
SP140-209ENST00000476126 HOXD11P31277 338 aaPredicted RBP9.02□□□□□ -0.97
SP140-209ENST00000476126 AIMP1Q12904 312 aaKnown RBP9.02□□□□□ -0.97
SP140-209ENST00000476126 HDGFL1Q5TGJ6 251 aa9.02□□□□□ -0.97
SP140-209ENST00000476126 CNKSR1Q969H4 720 aa9.02□□□□□ -0.97
SP140-209ENST00000476126 MRS2Q9HD23 443 aa9.02□□□□□ -0.97
SP140-209ENST00000476126 WDR90Q96KV7 1748 aa9.02□□□□□ -0.97
SP140-209ENST00000476126 CHL1O00533 1208 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 C21orf2O43822 256 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 GNAI1P63096 354 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 KRT24Q2M2I5 525 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 STYK1Q6J9G0 422 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 PRPF40BQ6NWY9 871 aaKnown RBP9.01□□□□□ -0.97
SP140-209ENST00000476126 POTEHQ6S545 545 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 MASTLQ96GX5 879 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 CFAP44Q96MT7 982 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 KDM2BQ8NHM5 1336 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 SCN4AP35499 1836 aa9.01□□□□□ -0.97
SP140-209ENST00000476126 ABCC12Q96J65 1359 aa9□□□□□ -0.97
SP140-209ENST00000476126 IBTKQ9P2D0 1353 aaPredicted RBP9□□□□□ -0.97
SP140-209ENST00000476126 SRGNP10124 158 aa9□□□□□ -0.97
SP140-209ENST00000476126 NPR1P16066 1061 aa9□□□□□ -0.97
SP140-209ENST00000476126 LMNB1P20700 586 aa9□□□□□ -0.97
SP140-209ENST00000476126 PROSER3Q2NL68 480 aa9□□□□□ -0.97
SP140-209ENST00000476126 CCDC184Q52MB2 194 aa9□□□□□ -0.97
SP140-209ENST00000476126 SOGA3Q5TF21 947 aa9□□□□□ -0.97
SP140-209ENST00000476126 GIGYF2Q6Y7W6 1299 aaKnown RBP9□□□□□ -0.97
SP140-209ENST00000476126 PPP1R42Q7Z4L9 355 aa9□□□□□ -0.97
SP140-209ENST00000476126 C16orf71Q8IYS4 520 aaPredicted RBP9□□□□□ -0.97
SP140-209ENST00000476126 RPGRQ92834 1020 aaKnown RBP9□□□□□ -0.97
SP140-209ENST00000476126 MBIPQ9NS73 344 aa9□□□□□ -0.97
SP140-209ENST00000476126 CHPF2Q9P2E5 772 aa9□□□□□ -0.97
SP140-209ENST00000476126 UBN2Q6ZU65 1347 aa9□□□□□ -0.97
SP140-209ENST00000476126 RIC1Q4ADV7 1423 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms